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43 protocols using h3506

1

Heparin Regulates Glomerular Immune Cells

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NZM.BAFFTg mice were given a bolus of PBS (0.02 mL iv via retro-orbital sinus) or H (0.2, 2.0, 20.0, 50.0, and 200 U, MilliporeSigma, H3506) in PBS. Glomeruli were evaluated 1 hour after H administration based on previous reports that H effect on capillary glycocalyx was maximal at this time point (59 (link), 60 (link)). With serial in vivo MPM imaging, single H treatment (200 U) was used on day 1, day 3, and day 5 (total 3 times injection), and the number of CD3+ and CD44+ cells of the same glomerulus was measured before and after H treatment. In some experiments the alternative glycocalyx-degrading enzyme heparinase III (MilliporeSigma) was injected iv (0.7 U/mouse) as above.
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2

Glycocalyx Protection and Kidney Function

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In acute studies, control and AS mice were given i.v. via retro-orbital sinus a 0.02 ml bolus of either vehicle (PBS) or H (50 U, MilliporeSigma, H3506). The thickness of GEC glycocalyx (width of FITC-WGA signal), the number of CD3+ and CD44+ cells, glomerular capillary blood flow, and albumin GSC in the same glomerulus were measured before and within 1 hour of H treatment. In chronic studies, H (200 U, as above) was given i.v. every other day for a total of 3 times, as described recently (10 (link)). The ACEi enalapril was administered at a dose of 10 mg/day/mouse via drinking water (150 mg/L), as described previously (32 (link)). Animals were treated with H, ACEi, or vehicle (PBS given i.v.) for 1 week followed by intravital MPM imaging and tissue harvest as described above. The albumin/creatinine ratio was measured from spot urine samples collected on days 0, 1, 3, and 7 using ELISA (10 (link)).
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3

Isolation and Analysis of Aortic Cells

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Following termination of WTD, aortas were isolated, digested with 2.5 mg/ml liberase (Millipore Sigma, LIBTM-RO), 120 U/ml hyaluronidase (Millipore Sigma, H3506), and 160 U/ml DNase I (Millipore Sigma, DN25) for 45 min at 37°C as previously described31 (link).
For qPCR analysis, cells were washed and stained with CD11b-APC, BV786-Ly6G, CD45.1-PE and CD45.2-BV421. Cells were sorted on a BD Influx sorter and isolated directly into TRIzol. qPCR analysis was conducted as described above.
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4

Collagen 2 Immunohistochemistry Protocol

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Collagen 2 immunohistochemistry was performed as previously described58 (link) using mouse monoclonal anti-collagen 2 antibody (II-II6B3; DSHB Iowa) with Dako EnVision detection kit. In brief, slides were treated with 0.1% pronase (P-8811; Sigma) in PBS for 20 minutes at room temperature, followed by 2.5% hyaluronidase (H-3506, Sigma) in PBS for 30 minutes at 37 °C. Endogenous peroxidase activity was quenched with 3% H2O2 for 10 minutes at room temperature. Nonspecific binding sites were blocked with 10% goat serum in PBS for 60 minutes at room temperature. Sections were then incubated with primary antibody against collagen type 2 diluted 1:50 in PBS overnight at 4 °C. The slides were then washed in PBS, and incubated with the secondary antibody (Dako Real Envision/HRP, K5007) for 30 min at room temperature. DAB (Dako Real DAB+Chromogen, K5007) was applied for about 2 min and then removed by rinsing with distilled water. Slides were mounted with Biomount Aqua (Biognost, Croatia) and covered. Exclusion of primary antibody resulted in no staining.
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5

Purification of Spermatogenic Cells from Mouse Testes

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Spermatogenic cells were purified using a method previously described46 (link). Briefly, testes from adult mice were removed and decapsulated. The seminiferous tubules were tore into small pieces and incubated in 10 ml DMEM (12100-046, Gibco) containing 1 mg/ml collagenase (C5138, Sigma) and 1 mg/ml hyaluronidase (H3506, Sigma) at 37 °C for 5 min with gentle shaking. After pipetting, the dispersed seminiferous tubules and cells were incubated at 37 °C for 5 min with gentle shaking. Then the cells were collected by centrifugation at 200 × g for 5 min at 4 °C, washed once with PBS, resuspended in 10 ml PBS containing 0.25% Trypsin and 1 mg/ml DNase I, and incubated at 37 °C for 5 min with gentle shaking. Cells were collected by centrifugation at 600 × g for 5 min and washed with 10 ml DMEM containing 0.5% BSA. After filtration through a 40 μm Nylon Cell Strainer, the cells were separated by 3 h of velocity sedimentation at unit gravity, using a 2–4% BSA gradient in DMEM. The cell fractions were bottom-loaded in a volume of 300 ml. The cell type and purity in each fraction were assessed using light microscope based on their diameters and morphological characteristics. Only fractions with the expected cell type and purity (≥90%) were pooled together.
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6

Rabbit Articular Cartilage Isolation

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Rabbits were euthanized under American Veterinary Medical Association guidelines and knees were isolated within 2 h of euthanasia. This study uses rabbits obtained from University of Texas Health Sciences (Dr. Steven Mills). Baylor College of Medicine did not require the study to be reviewed or approved by an ethics committee because we received dead animals. The articular knee joints were dissected under sterile conditions, and articular cartilage was isolated from both the femoral condyle and the tibial plateau. Isolated cartilage was diced into <1 mm (Mueller and Tuan, 2011 (link)) pieces before sequential digest, first in hyaluronidase for 30 min (660 Units/ml Sigma, H3506; in DMEM/F12 with pen/strep/amphotericin B, 30 mL), followed by collagenase type II for ∼16 h at 37°C (583 Units/ml Worthington Biochemical Corp.; in DMEM/F12 with 10% FBS, 1% pen/strep/fungizone, 30 mL). The digest was then filtered through a 70 μm cell strainer, washed with DMEM/F12, and resuspended in growth media (DMEM/F12 supplemented with 10% FBS, 1% pen/strep). Cells were subsequently infected as described below or cryopreserved (95% FBS, 5% DMSO).
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7

Evaluating Enzymatic Degradation Effects

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To qualitatively evaluate the effectiveness of enzymatic degradations, 3 μm sections were prepared for Picrosirius red and Safranin O [21 (link)] stains to determine the collagen and the GAG distributions, respectively. The Picrosirius Red -staining protocol used in our study was modified from the standard protocol [22 (link)] by adding the purification step to demonstrate collagen fibre patterns. This was conducted by 18 h immersion in 0.5% papain (Acros Organics, 416761000) in 0.05 M PBS (pH 4.4, 37°C) and 1000 U/ml hyaluronidase (Sigma-Aldrich, H3506) in 0.1 M PBS (pH 6.9, 37°C) digestions before the staining with 0.1% Direct red 80 in saturated picric acid (Sigma-Aldrich, 365548). Polarized light microscopy (PLM) was used to measure the retardance caused by picrosirius red stain in the sections to reveal alterations in the collagen content. The sections were imaged with Abrio polarized light imaging system (CRi, Inc., Woburn, MA, USA) mounted on a light microscope (Nikon Diaphot TMD, Nikon, Inc., Shinagawa, Tokyo, Japan).
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8

Isolation of Ovarian Cell Populations

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The isolation of ovarian cells from Kunming mice was performed as follows: Briefly, mouse ovaries at 2 dpp were minced in axenic phosphate-buffered saline (PBS; 137 Mm NaCl, 1.4 Mm KH2PO4, 4.3 Mm Na2HPO4, 2.7 Mm KCl) and then displaced into IV collagenase (Sigma-Aldrich, C5138) in a 37°C water bath for 20 min with shaking. The cells were centrifuged at 3,000 g for 10 min to remove collagenase, resuspended in D-Hanks (Thermo, SH3003002) with 0.05% trypsin-EDTA, and then centrifuged at 3,000 g for 10 min to collect the cells. The cells were cultured in dishes coated with 0.1% gelatin (Wako, 190-15805) for 5 h. The unattached (oocytes) and the attached (stroma) cells were collected. The growing oocytes and granulosa cells were collected from ovarian follicles of 14-d-old mice using the methods described previously.53 (link) The oocytes and granulosa cells of adult mice were directly collected from the uterine tube, and hyaluronidase (0.1% w/v, Sigma, H3506) was used to separate oocytes and granulosa cells. For DNA methylation analysis, sodium bisulfite treatment of genomic DNA from these isolated cells was performed as described in a previous study.54 (link) The sequencing primers are described in Table S1.
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9

Dissociation and Flow Cytometry Analysis

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Tissues were mechanically dissociated before enzymatic digestion using collagenase I (2 mg/mL, Sigma C0130), DNase I (25μg/mL, Roche 10104159001) and hyaluronidase (2mg/mL, SIGMA H3506). Red cells from dissociated tissues and whole blood were lysed (eBioscience 00-4300-54) and dead cells stained with Live/Dead Aqua. Cells were stained with the antibodies detailed in the Key Resources Table. Samples were analyzed by flow cytometry (BD LSR FORTESSA) using the BD FACS DIVA software 8.0. Data were analyzed on FlowJo V10.02.
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10

Tissue Dissociation and Cell Isolation

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Tissue was dissociated using the following steps. Fat layers were removed, washed, and opened longitudinally. Tissues were then minced and dissociated in a cocktail solution of 12 mg collagenase IV (LS004188; Worthington), 180 U DNase (D5025; Sigma) and 1.2 mg hyaluronidase (H3506; Sigma) in 20 ml complete RPMI-1640 media with constant stirring for 25 min at 37 °C. Single cell suspensions were then filtered, and supernatants were washed in PBS-2% FBS. Tissues were digested twice. A percoll (P1644; Sigma) gradient was then performed to remove platelets and debris by layering the 44 % percoll cell suspension over 67 % percoll and centrifuging at 400 g for 20 min at 4 °C without brake. The mononuclear cell layer was collected and washed in PBS-2% FBS buffer.
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