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Foxp3 transcription factor staining buffer set protocol

Manufactured by Thermo Fisher Scientific
Sourced in United Kingdom

The FoxP3 Transcription Factor staining buffer set is a laboratory product designed to facilitate the staining and detection of FoxP3, a transcription factor involved in the regulation of gene expression. The set includes buffers and reagents necessary for the intracellular staining and flow cytometric analysis of FoxP3-expressing cells. The core function of this product is to provide a standardized protocol and the necessary tools to researchers studying the role of FoxP3 in various biological processes.

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4 protocols using foxp3 transcription factor staining buffer set protocol

1

Comprehensive Splenic T-cell Immunophenotyping

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Splenic single cell suspensions were washed with PBS containing 2% FCS and labeled for 30 minutes at 4°C for a combination of cell surface markers with the following fluorescently labeled anti-mouse antibodies: anti-CD4-BUV395 (clone GK1.5), anti-CD44-V450 (clone IM7) (BD Horizon, Franklin Lakes, NJ, USA); anti-CD25-PE-Cy7 (clone PC61.5) (eBioscience); CD122-PE-Dazzle 594 (clone TM-beta1), and anti-PD-1-BV785 (clone 29F.1A12) (BioLegend, San Diego, CA, United States). Live/Dead™ Fixable Aqua Dead Cell Stain Kit (Invitrogen) was included in the cell surface labeling to assess cell viability. Cells were subsequently labeled intracellularly according to the FoxP3 Transcription Factor staining buffer set protocol (eBioscience) with anti-CD3zeta-FITC (clone H146–968) (Abcam, Cambridge, Cambridgeshire, United Kingdom) and anti-FoxP3-eFluor660 (clone 150D/E4) (eBioscience). Labeled cells were detected on a BD LSRFortessa X-20 (BD Biosciences, Franklin Lakes, NJ, United States). Data analysis was performed using FlowJo software (Tree Star, Ashland, OR, United States).
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2

Multiparametric Flow Cytometry of Splenic Immune Cells

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Splenic single cell suspensions were washed with PBS containing 2% FCS and labeled for 30 minutes at 4°C for a combination of cell surface markers with the following fluorescently labeled anti-mouse antibodies: anti-CD4-BUV395 (clone GK1.5), anti-CD44-V450 (clone IM7) (BD Horizon, Franklin Lakes, NJ, USA); anti-CD25-PE-Cy7 (clone PC61.5) (eBioscience); CD122-PE-Dazzle 594 (clone TM-beta1), and anti-PD-1-BV785 (clone 29F.1A12) (BioLegend, San Diego, CA, United States). Live/Dead Fixable Aqua Dead Cell Stain Kit (Invitrogen) was included in the cell surface labeling to assess cell viability. Cells were subsequently labeled intracellularly according to the FoxP3 Transcription Factor staining buffer set protocol (eBioscience) with anti-CD3zeta-FITC (clone H146–968) (Abcam, Cambridge, Cambridgeshire, United Kingdom) and anti-FoxP3-eFluor660 (clone 150D/E4) (eBioscience). Labeled cells were detected on a BD LSRFortessa X-20 (BD Biosciences, Franklin Lakes, NJ, United States). Data analysis was performed using FlowJo software (Tree Star, Ashland, OR, United States).
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3

Multivariate Immune Cell Phenotyping

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Single cell suspensions were washed and labelled at 4 °C for a combination of cell surface markers with the following antibodies: anti-CD4-BUV395 (clone GK1.5), anti-CD8a-V450 (clone 53–6.7), anti-CD122-PE-CF594 (clone TMbeta1), anti-CD44-V450 (clone IM7) and anti-CD69-BV786 (clone H1.2F3) (BD Horizon, Franklin Lakes, NJ, USA); anti-CD69-PerCP-Cy5.5 (clone H1.2F3) and anti-PD-1-BV785 (clone 29F.1A12) (BioLegend, San Diego, CA, USA); anti-CD25-PECy7 (clone PC61.5) (eBioscience); and Live/Dead Fixable Aqua (Invitrogen). Cells were labelled intracellularly with the following antibodies according to the FoxP3 Transcription Factor staining buffer set protocol (eBioscience): anti-CD3zeta-FITC (clone H146-968) (Abcam, Cambridge, Cambridgeshire, UK); anti-CTLA-4-BV605 (clone UC10-4B9), and anti-TNF-α-BV785 (clone MP6-XT22) (BioLegend); anti-FoxP3-eFluor660 (clone 150D/E4), anti-GARP-PE (clone YGIC86), anti-IFN-γ-PE-Cy7 (clone XMG1.2), and IL-4-PE (clone 11B11) (eBioscience); anti-IL-5-PE (clone TRFK5) (BD Pharmingen). Labelled cells were detected on a BD LSRFortessa X-20 (BD Biosciences, Franklin Lakes, NJ, USA). Gating analyses were performed using FlowJo software (Tree Star, Ashland, OR, USA).
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4

Isolation and Characterization of Immune Cells

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Spleens or lymph nodes (inguinal and cervical) were dissociated on a nylon mesh. Cell suspensions were treated with red blood cells (RBC) lysis buffer (0.83% NH4Cl vol/vol). Blood was harvested into heparin tubes and RBC lysed. Cell suspensions were incubated with 2.4G2 Fc Block and stained with fluorescently tagged antibodies (See Supplementary Table 1) in FACS buffer (PBS, 1%FCS, 2 mM EDTA, 0.02% sodium azide). Brilliant stain buffer (BD) was used when more than two Abs were conjugated with BD Horizon Brilliant fluorescent polymer dyes. Ova257–264/Kb, gB498–505/Kb, GP33–41/Db, GP276–284/Db, LLO91–99/Kd and p60217–225/Kd biotinylated monomers (1 mg/mL) obtained from the NIH tetramer Core Facility, were conjugated with PE-labeled Streptavidin (1 mg/mL) as follow: 6.4 μL of PE-Streptavidin were added to 10 μL of monomers every 15 min 4 times on ice. Newly generated tetramers (1/400–1/500 dilution) were used to stain cells for 1 h at 4 °C. For transcription factor (TF) intracellular staining, cells were fixed and stained according to the eBioscience Foxp3 Transcription Factor Staining Buffer Set protocol. Data acquisition was done using BD LSR II, FACSAria III or Cytek Aurora flow cytometer. All flow cytometry data were analyzed using FlowJo v9 or v10 software (TreeStar).
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