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14 protocols using dylight 488 goat anti rabbit igg

1

Quantifying HMGB1 in 4T1 Cells

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Different concentrations of COF samples were added to 4T1 cells and incubated overnight. Following various treatments, the 4T1 cells (2 × 103) were fixed with 4% paraformaldehyde, infiltrated with 0.5% Triton X-100 (BS084, Biosharp), blocked with 3% BSA (Biosharp BS114) in 0.1% triton/PBS for 1 hour, and incubated with anti-HMGB1 antibodies (1:400, ab18256, Abcam) at room temperature and Goat anti-Rabbit IgG DyLight 488 (1:200, A23220, Abbkine). The cells were then counterstained with DAPI (Beyotime Biotechnology, P0131), The slides were examined with an FV1000 confocal microscope (Olympus) using FV10-ASW software v. 4.0 (Olympus). The fluorescence signals were analyzed using Image-Pro Plus software v. 6.0 (Media Cybernetics).
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2

Immunofluorescence Staining for NOS2 and CD68

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Cells were subjected to a fixation using 4% paraformaldehyde (PFA) for 15 min. Subsequently, cells were treated with 0.5% Triton X-100 for 25 min for permeabilization. Then, a blocking step was carried out using 3% bovine serum albumin (BSA) (diluted in 1 × PBS) for 30 min. Next, cells were incubated with anti-NOS2 (1:200, Proteintech, Chicago, IL, USA) or anti-CD68 (1:200, SAB, Nanjing, China) overnight. The secondary antibody was stained with goat anti-rabbit IgG Dylight 488 (1:500, Abbkine, Wuhan, China) away from light for 1 h. Nuclei were stained with DAPI. The acquisition of images was carried out using a Zeiss-Axio Imager M2 microscope (Zeiss, Oberkochen, Germany).
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3

Immunohistochemistry of Zebrafish Embryos

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For immunohistochemistry processing, embryos were fixed overnight at 4°C in 4% paraformaldehyde (PFA). Next day, embryos were washed three times in 1 × PBS and then transferred into tubes with 100% MeOH. Fluorescent immunostaining for 96 hpf embryos was performed using the polyclonal zebrafish Rnf2 antiserum (1:300). The DyLight 488 goat anti-rabbit IgG (1:350, Abbkine, United States) was used as secondary antibody. The neurons were detected by using rabbit anti-HuC/D (1:200) as primary antibody and DyLight 555 goat anti-mouse IgG (1:350, Abbkine, United States) as secondary antibody. For whole-mount immunostaining, embryos were digested in PBS containing 10 g/ml proteinase K, 0.1% Tween20 and blocked in PBS containing 10% normal goat serum, 0.5% DMSO and 0.3% Triton X-100 (Wang et al., 2013 (link)). Images were taken with a confocal laser scanning microscope (Leica SP8 DLS).
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4

Immunofluorescence analysis of NRK52E cells and kidney tissue

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For immunofluorescence analysis of NRK52E cells, cells on glass coverslips were fixed with ice-cold methanol for 10 min and then permeabilized with 0.1% Triton for 5 min at 25°C. The cells were blocked with 5% bovine serum albumin (BSA, Biosharp, Beijing, China), incubated overnight at 4°C with primary antibodies (anti-Cpt1a, 1:100, Abclonal, Wuhan, China), and then incubated in the dark with secondary antibodies (DyLight 488 goat anti-rabbit IgG, 1:500, Abbkine, Wuhan, China) for 1 h at 25°C. Finally, nuclei were stained with Hoechst (Beyotime) for 5 min.
Immunofluorescence analysis of the left kidney tissue was performed on paraffin-embedded sections mounted on glass slides. Primary antibody anti-F4/80 (1:1000, Cell Signaling Technology) and HRP-goat anti-rabbit IgG secondary antibody (1:4000, Abcam) were used. The slides were visualized under a fluorescence microscope (Nikon Eclipse, Tokyo, Japan).
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5

Immunohistochemical Analysis of Corneal Tight Junctions

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Rats were sacrificed 3 or 7 days after suturing. The eyes were removed, and corneas were dissected from the ocular bulb. Corneas were embedded in SAKURA Tissue-Tek® O·C.T. compound and sliced at a thickness of 3 μm using a cryostat (Leica CM1950, China). After rewarming the frozen cross sections at room temperature, the sections were fixed in 4 % paraformaldehyde for 20 min, followed by a blocking and permeabilization step for 1 h in PBS with 1 % BSA and 0.5 % Triton-X. Then the sections were incubated with primary antibodies against ZO-1 (1:1000, 21773-1-AP, Proteintech, China), E-cadherin (1:100, 20874-1-AP, Proteintech, China) and β-catenin (1:200, 51067-2-AP, Proteintech, China) at 4 °C overnight. The sections were then incubated with Dylight 488 goat anti-rabbit-IgG (1:500, Abbkine, China) for 1h at room temperature. DAPI was used as a nuclear counterstain. The sections were photographed under a fluorescence microscope (Olympus, Japan).
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6

Decidual Macrophage Responses to Toxoplasma Infection

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Purified, human decidual macrophages from uninfected, infected, and LILRB4-neutralized infected groups were cultured for 24 h after T. gondii infection and then fixed in 4% paraformaldehyde for 15 min and blocked with goat serum for 1 h. Cells were then incubated overnight at 4°C with anti-LILRB4 (Santa Cruz, Germany) and anti-CD163 (BD, USA), or anti-LILRB4 and anti-CD86 (BD, USA) antibodies. DyLight 488-goat anti-rabbit IgG (Abbkine, USA) was used as a secondary antibody for anti-LILRB4 antibody, and DyLight 649-goat anti-mouse IgG (Abbkine, USA) was used as a secondary antibody for anti-CD163 and anti-CD86. Cells were incubated with appropriate concentrations of secondary antibodies at 37°C for 1 h and were subsequently stained with the nucleic acid stain 4′,6-diamidino-2-phenylindole for 15 min. Finally, cells were observed using a laser confocal microscope (Leica, Germany).
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7

UV-Induced Protein Expression Imaging

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Cells were seeded on to coverslips, irradiated with UVB light, and harvested at various time points. Afterward, 4% formaldehyde solution (15 minutes, room temperature) was act on fixed cells, the cell membranes were permeated with 1% Triton X-100 for 10 minutes, blocked with 5% goat or donkey serum for 60 minutes at 37°C, and cultivated overnight at 4°C with primary antibodies. The next morning, the cells were reacted at 37°C for 1 hour with the fluorescent secondary antibodies after washing 3 times. Nuclei were counterstained with 4, 6-diamidino-2-phenylindole (DAPI; Beyotime Institute of Biotechnology, China) for 5 minutes in the dark. All cell samples were imaged using laser confocal microscope (LSM 800; Carl Zeiss AG, Germany). The antibodies in this study: Hsp27 (1: 200; Cell Signaling Technology, USA) and p21 (1: 200; Abcam, UK), Alexa Fluor 594-conjugated goat anti-mouse IgG (1: 200; catalog no. SA00006-3; Proteintech, China), Dylight 488 goat anti-rabbit IgG (1: 200; catalog no. A23230-1; Abbkine Scientific, China), and Dylight 549 goat anti-rabbit IgG (1: 200; catalog no. A23320-1; Abbkine Scientific, China.).
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8

Antibody Characterization for SRBSDV P10

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The anti-SRBSDV P10 antibody was kindly gifted by Professor Jianxiang Wu (Zhejiang University). The other antibodies were purchased: anti-β actin antibody (Proteintech, 66008), anti-P-JNK antibody (Bioss, BS-4163R), anti-Atg8 antibody (Abgent, AP1802a), anti-LAMP1 antibody (Bioss, BSM-51301M), goat anti-mouse IgG+HRP antibody (Solarbio, SE131), anti-Myc tag antibody (Proteintech, 66004), anti-His tag antibody (Cell Signaling Technology, 2365), Dylight 488 goat anti-rabbit IgG (Abbkine, A23220), Dylight 488 goat anti-mouse IgG (Abbkine, A23210), Dylight 549 goat-anti-mouse IgG (Abbkine, A23310), goat anti-mouse IgG+HRP (Thermo Fisher, 32430), goat anti-rabbit IgG+HRP (Thermo Fisher, 32460). Other reagents used and their sources are mounting medium with 4′6-diamidino-2-phenylindole (DAPI) (Abcam, AB104139), rapamycin (Solarbio, IR0010), 3-methyladenine (3-MA) (Solarbio, IM0190), anisomycin (TargetMol, T6758), SP600125 (Abcam, AB120065).
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9

Immunofluorescence Analysis of HK-2 Cells

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HK-2 cells were cultured in 6-well plate format for cell immunofluorescence analysis. After treatment of rosiglitazone (100 μM) and TGF-β (20 ng/ml) for 48 h, the medium was removed and cells were cleaned three times with PBS. Cells in coverslips of 6-well plate were fixed in 4% paraformaldehyde for 15 min, and then blocked with 10% goat serum (Boster, AR0009, China) for 1 h before incubation with primary antibodies against 4-HNE (1:100 dilution), Fibronectin (1:250 dilution) and α-SMA (1:250 dilution) at 4 °C for 24 h. After incubation, coverslips were rinsed three times with PBS for 5 min and incubated with the secondary antibodies Dylight 488 goat anti-rabbit IgG (Abbkine, California, USA) and Dylight 594 goat anti-mouse IgG (Abbkine, California, USA) for 60 min at room temperature. After antifade mounting medium with DAPI (Beyotime, P0131, China), samples were observed under confocal microscopy (Nikon C2, Japan) and fluorescence intensity was analyzed using ImageJ software.
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10

Chlamydomonas and IMCD3 Cell Immunofluorescence

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Chlamydomonas or IMCD3 cells were fixed with methanol at −20 °C for 20 min or 4% paraformaldehyde/phosphate-buffered saline (PBS) for 15 min at room temperature, respectively. Cells were washed three times with PBS and permeabilized by incubation with 0.5% Triton X-100 in PBS for 15 min. IMCD3 cells were incubated on ice for 30 min to depolymerize cytoskeletal MTs before fixation. Nonspecific binding sites were blocked with 4% bovine serum albumin (BSA) for 1 h at 37 °C. Cells were incubated with primary antibodies at 4 °C overnight. The following primary antibodies were used for immunofluorescence: antiacetylated-tubulin rabbit IgG (1:1,000, catalog [Cat.] #ab179484, Abcam) and anticeramide mouse IgG (1:100, Cat. #C8104-50TST, Sigma-Aldrich). Dylight 488 goat anti-rabbit IgG (1:500, Cat. #A23220-1, Abbkine), Dylight 549 goat anti-rabbit IgG (1:500, Cat. #A23320-1, Abbkine ), Dylight 488 goat anti-mouse IgG (1:500, Cat. #A23210-1, Abbkine), and Dylight 549 goat anti-mouse IgG (1:500, Cat. #A23310-1, Abbkine) were diluted 1:500 in 4% BSA/PBS and cells were incubated for 1 h at 37 °C. DAPI (Sigma-Aldrich) was used to visualize the nuclei.
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