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Opti memtm medium

Manufactured by Thermo Fisher Scientific
Sourced in United States

Opti-MEM™ medium is a serum-reduced cell culture medium designed for the maintenance and growth of a variety of cell lines. It is formulated to provide a reduced serum environment while supporting cell viability and proliferation.

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13 protocols using opti memtm medium

1

Transfection of Cells for Gene Knockdown or Overexpression

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The day before knockdown or overexpression, cells were seeded in a six-well plate to achieve a cell density of 40%. The culture medium was then removed, and the cells were washed twice with sterile PBS. Each well of the six-well plate was filled with 1.5 mL of Opti-MEMTM medium (Gibco, USA). Additionally, a sterile centrifuge tube was prepared, and 0.5 mL of Opti-MEMTM medium, 5μL of small interfering RNA (siRNA) or overexpression plasmid, and 5μL of Lipofectamine 2000 (Thermo Fisher Scientific, Shanghai, China) were mixed and allowed to stand for 20 min. The mixture was then added to the experimental group cells, while the control group received the same mixture without siRNA or overexpression plasmid. After 6 h, the medium was replaced with complete culture medium, and the cells were cultured for 48 h before collection for analysis.
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2

Investigating Pam2-Mediated TLR2 Interactions

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Maxisorp NUNC-immuno plates were coated with streptavidin (from Streptomyces avdinii, Sigma) at 1 µg/well in PBS and incubated at 4 °C overnight. All incubations were performed in a humid chamber. To avoid unspecific binding, the plates were blocked with PBS containing 1% BSA (Sigma-Aldrich) for 1 h at 37 °C. After the blocking procedure, the plates were washed three times with pre-warmed PBS.
To investigate the interactions of Pam2 with human 18S rRNA and TLR2 fusion protein, Pam2-Biotin (Pam2-Biotin-Aca-Aca-NH2, Genaxxon bioscience) was preincubated with human 18S rRNA in ultra-pure water (10 µL) for 30 min at 37 °C. Subsequently, TLR2 fusion protein and medium were added (pure Opti-MEMTM medium, Gibco) for an additional 30 min at 37 °C. This mixture was added to the streptavidin-coated plates (50 µL/well) and incubated for 15 min at 37 °C, followed by three washing steps with PBS.
For the detection of TLR2, each well was incubated with an anti-human IgG-peroxidase conjugated antibody (1:1000, Dako) for 1 h at 37 °C. After the last washing step, a substrate buffer with 20 mg o-phenylenediamine dihydrochloride (OPD, Sigma) and 30% of H2 O2 was applied to the wells (50 µL) and incubated for approximately 20 min at room temperature in the dark. The reaction was stopped by adding 25 µL/well 2 M H2 SO4, and absorption was measured with a photometer at 450–650 nm
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3

COX-2 Promoter Activity Assay

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Transfection was performed using Opti-MEMTM medium (GibcoTM, Carlsbad, CA, USA) and the Lipofectamine 3000 Transfection Kit from Invitrogen (Carlsbad, CA, USA) for 20000 cells (TeloHAEC) in a 96-well format.
COX-2 promoter activity was measured with pDRIVE5-Lucia-hCOX2 (InvivoGen, Waltham, MA, USA) controlling the expression of a secreted luciferase enzyme and pSELECT-zeo-SEAP (InvivoGen) as a control plasmid to normalize the transfection efficiency. Both plasmids were used at a 1:1 proportion, and their activity was measured using QUANTI-LucGoldTM (InvivoGen) and QUANTI-Blue (InvivoGen) kits, respectively.
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4

CHST15 Overexpression in Mesenchymal Cells

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The CHST15 overexpression plasmid (Transcript sequence: NM_015892) (Genechem Co., Ltd., Shanghai, China) was transfected into MSCs and MPCs using Lipofectamine Stem Transfection Reagent (Invitrogen) according to the transfection protocol. A total of 1.5×105 cells/well were seeded in a six-well plate. When cells reached 30–60% confluence, cells were thoroughly mixed with the Lipofectamine Stem Reagent in Opti-MEMTM medium (Gibco) and plasmid DNA in Opti-MEM medium (Gibco) for 10 min at room temperature. Then, the mixture was added to cells and cultured at 37 ℃ for 1–2 days. Finally, the transfected cells were collected for subsequent experiments.
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5

Transient Transfection of ME2 in HEK293T Cells

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Approximate 70% confluent HEK293T cells (1 × 106 cells) on a 6 cm dish were transfected with the pcDNA3.1-empty (backbone vector) and pcDNA3.1-ME2 by a transfection reagent TransIT-X2® (Mirus Bio LLC, WI, USA) with opti-MEMTM medium (Gibco, Thermo Fisher Scientific, Waltham, MA, USA, Waltham, MA, USA) for 24 h at 37 °C in a humidified incubator containing 5% CO2. The pcDNA3.1-empty (Plasmid #52535) was purchased from Addgene (Cambridge, MA, USA) and the pcDNA3.1-ME2 was constructed by inserting the ME2 gene into the vector. Immunoblotting was used to determine the ME2 expression level in the cell.
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6

Adenoviral Transduction of HEK-293 and M0-Macrophages

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Adenoviruses expressing WT or T34A-mutant survivin were added to HEK-293 cells or M0-macrophages at a multiplicity of infection (MOI) of 50, followed by incubation for 2 h at 37 °C in Opti-MEMTM Medium (Gibco; Thermo Fisher Scientific Inc., Waltham, MA, USA). An adenovirus expressing GFP was used as control. After incubation, adenovirus-containing medium was replaced with standard culture medium. Cells and CM for antibody neutralizing experiments were collected after 24 h of incubation.
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7

GFP-ESM1 Plasmid Transfection in MES 13 Cells

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The GFP-ESM1 plasmid was purchased from GENEWIZ (Takeley, UK) and the ESM1 sequences as previously reported [42 (link)]. For transfection, 3 μg GFP or GFP-ESM1 plasmid in Opti-MEMTM medium (Thermo Fisher, Waltham, MA, USA) was mixed with 6 µL of Lipofectamine 3000 reagent (Thermo Fisher Scientific, Waltham, MA USA) for 20 min, then added to DMEM/F12 medium (10% FBS) and incubated with MES 13 cells for 48 h. The GFP transfection efficiency was determined by fluorescence microscopy. Cells were assessed for the protein expression of ESM1 and EndoMT markers by Western blot analysis.
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8

Modulation of NQO1 Expression in MDA-MB-231 Cells

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For the NQO1 overexpression, the NQO1 expression vector (Cat. No. HG12046-CM; Sino Biological Inc., Beijing, China) was mixed with HyFectTM DNA Transfection Reagent (Leadgene Biomedical Inc., Tainan, Taiwan) at a ratio of 1 μg of DNA:3 μl of reagent in 50 μl of Opti-MEMTM medium (Thermo Fisher Scientific Inc., Waltham, MA, USA) at room temperature for 15 min. The DNA/reagent complexes were then added to MDA-MB-231 cells and incubated at 37 °C overnight. Afterward, a fresh medium containing 400 μg/ml hygromycin B (Roche Diagnostics GmbH, Mannheim, Germany) was prepared for selection for 96 h. The surviving cells were then used for further experiments. For the NQO1 knockdown, the cells were transduced with NQO1-specific shRNA (Clone No. TRCN0000350362) or LacZ-specific shRNA (Clone No. TRCN0000231722) carrying a lentivirus (the National RNAi Core Facility at Academia Sinica, Taipei, Taiwan) with 8 μg/ml polybrene (Sigma-Aldrich) at 37 ºC overnight. A fresh medium containing 2 μg/ml puromycin (TOKU-E, Bellingham, WA, USA) was also prepared for selection for 48 h. The surviving cells were harvested and used for further experiments.
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9

Labeling and Tracking Extracellular Vesicles

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ELVs were labelled with Alexa Fluor 555 dye (AF555) conjugated to oligonucleotides (BLOCK-it Alexa Fluor Red Fluorescent Control, Invitrogen, Thermo Fisher Scientific, Vilnius, Lithuania) by lipofection (RNAiMAX, Invitrogen, Thermo Fisher Scientific, Lithuania, Vilnius). Briefly, a mixture of 0.2 µM of AF555-oligonucleotide conjugate was mixed with 3 µL of RNAiMAX reagent in 100 µL of the Opti-MEMTM medium (Gibco™, Thermo Fisher Scientific, Bleiswijk, The Netherlands) and incubated for 5 min at room temperature. Particle preparation (1 mg/mL of total protein) was added into lipofection mixture and incubated at 37 °C for one hour. After incubation, unincorporated dye and residual micelles were removed using Exosome Spin Columns (Invitrogen, Thermo Fisher Scientific, Vilnius, Lithuania). For a micelle-cleaning efficiency assessment, the fluorescence intensity of lipofection mix comprising 0.2 µM pmol AF555-oligonucleotide conjugate, 7.5 uL RNAiMAX reagent and 92.5 uL of PBS was measured before and after cleaning procedure using Tecan Infinite Pro plate reader. The calculated efficiency of unincorporated dye elimination from ELV samples was 99.99% (Figure A2). After the labelling and cleaning procedure, the particles were concentrated using 100 K Amicon® ultra centrifugal filters (Merck Millipore, Darmstadt, Germany) and used for internalisation and tracking analysis.
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10

Manipulating SBF2-AS1 and ADAM17 in Lung Cancer

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The pcDNA3.1 vector carrying SBF2-AS1 (SBF2-AS1), pcDNA3.1 vector carrying ADAM17 (ADAM17) or empty vector (vector) were obtained from RiboBio (Guangzhou, Guangdong, China). MiR-338-3p mimics, miRNA negative control (miR-NC), miR-338-3p inhibitor, miR-NC inhibitor, small interfering RNA (siRNA) targeting SBF2-AS1 or ADAM17 (si-SBF2-AS1, si-ADAM17) and scramble control siRNA (si-Con) were purchased from RiboBio. 2×104 A549 or H1975 cells were transfected with 100 μmol/L miRNAs, or 5 μg pcDNA3.1, or 50 nM siRNA using 7.5 μl of Lipofectamine 3000 (Thermo Fisher Scientific) in 125 μl of Opti-MEMTM medium combination with 5 μl of p3000 for twenty-four hours. For functional assay in vivo, sh-SBF2-AS1 and sh-Con were purchased from RiboBio and constructed into A549 cell. The cDNA sequences of SBF2-AS1 were constructed by Shanghai Jima Pharmaceutical Technology Co., Ltd., (Shanghai, China) and were subcloned into pLKO.1 lentivirus vector (Addgene). pLKO.1 empty vector was used as negative control plasmid. Then, lentivirus plasmid was transfected into HEK-293T cell along with lentivirus packaging plasmids (psPAX2 and pMD2.G, Addgene). 72 hours after transfection, cell supernatants were collected and A549 cell was infected with lentivirus, followed by the screening of 1.5 μg/ml puromycin (Sigma). After 7 days, stable lentivirus transfected A549 cell lines were obtained.
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