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1

Mouse Cell Culture and Lentiviral Transduction

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HM‐1 cells were acquired through Riken BRC. Cells were cultured in α‐MEM, supplemented with 10% FBS and penicillin/streptomycin or as recommended by the supplier. KPCA cell lines36 were donated by the Weinberg lab and were cultured in fallopian tube cells media (FT‐media); DME media supplemented with 1% Insulin Transferrin‐Selenium (Thermo Fisher Scientific; ITS‐G, 41400045), 100 μl EGF (10 μg/ml), 4% heat‐inactivated fetal bovine serum (Thermo Fisher Scientific; IFS, F4135) and 1% penicillin and streptomycin. All cells were grown in a 5% CO2 humidified atmosphere at 37°C. All cell lines were murine pathogen tested and confirmed mycoplasma negative by Lonza MycoAlert™ Mycoplasma Detection Kit. Lentivirus was used to produce stable production (following 72 h of puromycin selection) of mcherry and luciferase in HM‐1 cells.
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2

Directed Differentiation of iPSC-Derived Myoblasts

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iPSC-derived myoblasts (MBs) were obtained from the laboratory of April Pyle (UCLA, USA), using a protocol previously described [19 (link)]. In brief, iPSCs (S21 line) were directed to differentiate for 50 days and myogenic progenitor cells enriched by flow cytometry using cell surface markers HNK1-ERBB3+NGFR+. iPSC MBs were then maintained in SkBM-2 supplemented with 20 ng/ml human fibroblast growth factor 2 (Peprotech). For differentiation into skeletal myotubes, MBs were plated into the MFP (1 × 104 cells) or onto glass cover slips inside a 12-well plate. After 1 day, they achieved 70–80% confluency and were then cultured in DMEM-F12 (Thermo Fisher) supplemented with N2 supplement (1:100, Thermo Fisher), ITS-G (Thermo Fisher), insulin-like growth factor 10 ng/ml (Peptrotech), 10 μM SB and PSG. Six days later, the medium was supplemented with 10% FBS (Thermo Fisher), 100 ng/ml recombinant rat agrin (R&D), 4 pg/μl GD (PeproTech).
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Directed Differentiation of iPSC-Derived Myoblasts

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iPSC-derived myoblasts (MBs) were obtained from the laboratory of April Pyle (UCLA, USA), using a protocol previously described [19 (link)]. In brief, iPSCs (S21 line) were directed to differentiate for 50 days and myogenic progenitor cells enriched by flow cytometry using cell surface markers HNK1-ERBB3+NGFR+. iPSC MBs were then maintained in SkBM-2 supplemented with 20 ng/ml human fibroblast growth factor 2 (Peprotech). For differentiation into skeletal myotubes, MBs were plated into the MFP (1 × 104 cells) or onto glass cover slips inside a 12-well plate. After 1 day, they achieved 70–80% confluency and were then cultured in DMEM-F12 (Thermo Fisher) supplemented with N2 supplement (1:100, Thermo Fisher), ITS-G (Thermo Fisher), insulin-like growth factor 10 ng/ml (Peptrotech), 10 μM SB and PSG. Six days later, the medium was supplemented with 10% FBS (Thermo Fisher), 100 ng/ml recombinant rat agrin (R&D), 4 pg/μl GD (PeproTech).
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Multipotency Assessment of FasL-Overexpressing MSCs

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To determine the multipotency of MSC overexpressing FasL, cells transduced as described above and were seeded at a 5000 cell/cm2 in 24-well plates and left to adhere overnight. Twenty-four hours after transduction, media was changed with adipogenic and osteogenic induction media, respectively, as well as normal MSC media. Media was changed every 2 to 3 days. The adipogenic induction media contained DMEM 1-g/L glucose supplemented with 10% MSC-FBS, 10−6-M dexamethasone, 100-mM indomethacin and 1% insulin-transferrin-selenium (ITS-G, ThermoFisher, Waltham, MA, USA), and the osteogenic induction media was based on DMEM 1-g/L glucose supplemented with 10% MSC-FBS, 10−7-M dexamethasone, 10-mM β-glycerophosphate and 0.3-mM ascorbic acid. After 2 weeks, cells were washed with phosphate buffer saline (PBS), fixed with 4% paraformaldehyde and stained with Oil Red O to visualize the lipid droplets accumulated in the differentiated adipocytes or with von Kossa stain represented by incubation in 5% AgNO3, followed by a short 2-min rinse with 5% sodium thiosulphate to visualize the Ca2+ crystals. All the images were taken using an Olympus CKX41 microscope with an Olympus XC30 camera and minimally processed using Adobe Photoshop software.
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5

Multipotency Assessment of BALB/c-Derived MSCs

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To determine the multipotency of BALB/c-derived MSC, cells were seeded at a 5000 cell/cm2 in 24-well plates and left to adhere overnight. Twenty-four hours after passage, media were changed with adipogenic and osteogenic induction media, respectively, as well as normal MSC media. Media were changed every 2 to 3 days. The adipogenic induction media contained DMEM 1 g/L glucose supplemented with 10% MSC-FBS, 1 µM dexamethasone, 100 mM indomethacin, and 1% insulin–transferrin–selenium (ITS-G, Thermo Fisher Scientific, Waltham, MA, USA), and the osteogenic induction media was based on DMEM 1 g/L glucose supplemented with 10% MSC-FBS, 0.1 µM dexamethasone, 10 mM β-glycerophosphate, and 0.3 mM ascorbic acid. After 2 weeks, cells were washed with phosphate buffer saline (PBS), fixed with 4% paraformaldehyde, and stained with Oil Red O to visualize the lipid droplets accumulated in the differentiated adipocytes or with von Kossa stain represented by incubation in 5% AgNO3, followed by a short 2 min rinse with 5% sodium thiosulphate to visualize the Ca2+ crystals. The images were taken using an Olympus CKX41 inverted microscope with an Olympus XC30 camera and minimally processed using Adobe Photoshop software, version CS3 (Adobe, San Jose, CA, USA).
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Directed Somite Differentiation of hPSCs

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On day −1, hPSC colonies were dissociated into single cells with TrypLE Express (Thermo Fisher Scientific) and seeded on Matrigel-coated tissue culture plates at 25,000 cells/cm2 in mTeSR1 medium containing 10 µM of Y-27632 (Tocris). Somite differentiation was initiated the next day (day 0) when medium was switched to basal differentiation medium (BDM; DMEM/F12, 1% ITS-G and 0.5% Penicillin-Streptomycin; all from Thermo Fisher Scientific) supplemented with 3 µM of CHIR99021 (CHIR; Tocris) for 2 days. On day 2, cells were switched to BDM supplemented with 200 nM of LDN193189 (LDN; Stemgent) and 10 µM of SB431542 (SB; Tocris) for another 2 days. Cells were fed with fresh medium every day.
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7

Chondrogenic Differentiation of DCs with sEVs

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Approximately 200,000 DCs were placed in a polypropylene conical tube (Corning Inc., USA) with 0.5 ml of chondrogenic media (DMEM-high glucose added with insulin, transferrin, and selenium (ITS-G; Thermo Fisher Scientific, MA, USA)), 5 mg/ml linoleic acid, 10 ng/ml transforming growth factor beta (TGF-β1; R&D Systems, MN, USA), 14 mg/ml ascorbic acid, 10− 7 M dexamethasone (Sigma-Aldrich, MS, USA), 1.0 mg/ml human serum albumin (Equitech-Bio Inc., KV, USA), and 1% penicillin/streptomycin). The cells were centrifuged (470×g at 4 °C for 5 min) and incubated (37 °C and 5% CO2) for 3–4 h to allow spheroid formation. For the EV treatment group, the media were replaced with 500 μl of chondrogenic media containing sEVs (5 × 1010 vesicles/ml). Chondrogenic media without the sEVs served as control. The media were replaced with fresh media with or without sEVs every 48 h, the used media were collected and centrifuged (300×g, 4 °C, 5 min), and the supernatants were stored at − 80 °C for further analysis. The pellets were then harvested at days 7, 14, and 28. Four replicates of pellets were cultured for each group and repeated with different donor cells (n = 5) separately. Two replicates were used for histology and two for biochemical analysis.
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8

In Vitro Differentiation of HSAEC_4T53RD Cells

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For in vitro differentiation, HSAEC_4T53RD cells were co-cultured with TIG3 human lung fibroblasts in Matrigel (BD Bioscience, CA, USA) as described by McQualter et al.[11 (link)] with some modifications. Briefly, HSAEC_4T53RD cells (1 x 103 cells) and TIG3 (1 x 105 cells) were mixed and resuspended in 100 μL of Matrigel prediluted 1:1 (vol/vol) with the co-culture medium (DMEM/F-12, GlutaMAX (Thermo Fisher Scientific, MA, USA) supplemented with 10% foetal calf serum, ITS-G (Thermo Fisher Scientific, MA, USA) and antibiotic–antimycotic (Thermo Fisher Scientific, MA, USA)). The cells suspended in Matrigel were then added to a 24-well transwell filter insert (Millicell-CM; Merck Millipore, MA, USA) in a 12-well tissue culture plate containing 1 mL of co-culture medium. Cultures were incubated at 37°C in a low-oxygen environment (3% O2 and 5% CO2) in a humidified incubator for 10–14 days and refed three times per week.
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9

Chondrocyte Response to MMP-1 Exposure

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Three stimulation groups were performed on DC pellets, namely the MMP-1, the CM + MMP-1, and the control group. Pellets in the MMP-1 group were cultured in chondrogenic media: DMEM-high glucose added with insulin, transferrin, and selenium (ITS-G; Thermo Fisher Scientific), 5 mg/mL linoleic acid, 10 ng/mL transforming growth factor-β (TGF-β1; R&D Systems, MN, USA), 14 mg/mL ascorbic acid , 10 -7 M dexamethasone (Sigma-Aldrich, MO, USA), 1.0 mg/mL human serum albumin (Equitech-Bio Inc., Kerrville, TX, USA), and 1% penicillin/streptomycin). Based on the concentration of MMP-1 detected in disk tissue from patients diagnosed with degenerative disk disease, concentrations of 5, 50, or 100 ng/mL MMP-1 (R&D Systems, Minneapolis, MN, USA) were selected and added to the pellet from days 14-28 during every media change. MMP-1 was added on day 14 in order to allow the cells to start producing matrix within the pellets before the matrix-degrading enzyme was added. Pellets in the CM + MMP-1 group were cultured in CM supplied with chondrogenic media in a 1: 1 ratio to replenish the nutrients depleted. MMP-1 at concentrations of 5, 50, or 100 ng/mL were added on days 14-28. Pellets treated with chondrogenic media alone without addition of MMP-1 or CM served as controls.
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10

Cell Culture Protocols for Patch Clamp and Voltage Sensitive Dye Experiments

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The MDA-MB-231 breast cancer cell line was obtained from ATCC and cultured in DMEM with 10% FBS (Hyclone). Cells were passaged regularly when they reached approximately 70% confluency and used between p5 and p15 for all experiments. For patch clamp, 1.5×105 cells were seeded in an uncoated 2 cm plastic dish 24 h prior to the experiment. For voltage sensitive dye experiments, 1.0×104 cells per well were seeded in an uncoated 96-well plastic plate 24 h prior to the experiment. The renal proximal tube epithelial cell (RPTEC/TERT1) line was obtained from ATCC. RPTEC/TERT1 cells were cultured in DMEM/F-12 medium (Thermo Fisher Scientific), containing L-Glutamine and HEPES and supplemented with 25 ng/ml hydrocortisone (Sigma-Aldrich), 5 pM triiodo-L-thyronine (Sigma-Aldrich), 10 ng/ml recombinant human EGF (Thermo Fisher Scientific), 25 ng/ml prostaglandin E1 (Sigma-Aldrich), 3.5 µg/ml L-Ascorbic acid (Sigma-Aldrich), 1× ITS-G (Thermo Fisher Scientific) and 100 µg/ml geneticin (Thermo Fisher Scientific). For patch clamp and voltage sensitive dye measurements, RPTEC/TERT1 cells were seeded at 50% density into 35 mm dish and 12-well plate respectively and were grown for 3 days before starting the experiments. RPTEC/TERT1 cells up to p16 were used for all the experiments. Cells were regularly tested for mycoplasma (every 2 months) by PCR.
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