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Chip ittm kit

Manufactured by Active Motif
Sourced in Japan

The ChIP-ITTM kit is a product offered by Active Motif for chromatin immunoprecipitation (ChIP) experiments. The kit provides the necessary reagents and protocols to perform ChIP assays.

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6 protocols using chip ittm kit

1

Detecting FoxO1 Binding in hSR-BI/CLA-1 Promoter

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The ChIP-ITTM kit from Active Motif was used to detect the binding of FoxO1 to the hSR-BI/CLA-1 promoter region in HUVECs. Sonicated chromatin was immunoprecipitated with 2 µg of FoxO1 antibody or negative IgG overnight. The purified DNA of each group was analyzed by PCR to harvest the region containing the putative FoxO1 response sequence (FRS) in the promoter region of hSR-BI/CLA-1. The forward primer was 5′-AGGATAGGGCCAGGCGGATAC and the reverse primer was 5′-CCCTCATCTCCGCAGTCCATC. The PCR product was 129 bp.
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2

ChIP-IT Assay for ABCA1 Promoter

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Chromatin immunoprecipitation (ChIP) assays were performed by the ChIP-ITTM kit (Active Motif). Chromatin was immunoprecipitated with 2 μg of either PREB antibody (Abcam, ab42501) or negative control IgG. DNA was analyzed by PCR or real-time PCR to amplify the fragment spanning nucleotides −849 to −732 of the human ABCA1 promoter sequence containing PRS by using primers forward 5′-TACACGACTGCAATTCTCTGGCTG-3′ and reverse 5′-TGAGAGGAAGGAGGCCACAAAAAC-3’ [29 (link)].
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3

Chromatin Immunoprecipitation (ChIP) Assay

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ChIP assay was conducted to verify the interaction between the transcription factor and the targeted genes' promoter region. In this study, a total of 5 × 106 cells were cultured in each 10 cm dish and subjected to the protocol of ChIP by using ChIP‐ITTM Kit (Active Motif). Chromatin was immunoprecipitated with 2 μg of either the transcription factor antibodies (Abcam) or IgG as the negative control. The extracted DNA followed was then analyzed through PCR and RT‐qPCR by introducing the relative primers (Supporting Information: Table 1) for amplification of the fragment including the promoter sequences of the targeted genes.
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4

Investigating Anillin Gene Regulation by SOX4

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Chromatin immunoprecipitation (ChIP) assay was applied to investigate the binding interaction between the promoter region of Anillin genes and the transcription factor SOX4. A total of 5 × 106 cells were cultured in each 10 cm dish and subjected to the protocol of ChIP by using ChIP-ITTM Kit (Active Motif). Chromatin was immune-precipitated with 2 μg of either SOX4 antibody (Abcam,USA) or IgG as the negative control. The extracted DNA followed was then analyzed through PCR and RT-qPCR by introducing the relative primers (Suppl. Table 1) for amplification of the fragment including the promoter sequence of Anillin gene.
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5

Chromatin Immunoprecipitation of LXR on ABCA1 Promoter

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ChIP assay was performed by the ChIP-ITTM kit (Active Motif, Tokyo, Japan) according to the manufacturer’s instructions. Chromatin was immunoprecipitated with rabbit LXR antibody (Santa Cruz Biotechnology Inc., Dallas, CA, USA) by using control IgG as a negative control. DNA containing the putative LXR-binding sites on rat ABCA1 promoter was amplified by PCR using forward primer 5′-GCTTTCTGCTGAGTGACTGAACTAC-3′ and reverse primer: 5′-GAATTACTGCTTTTTGCCGCG-3′ as described previously [17 (link)]. PCR was performed using TAKARA PCR thermal cycler MP in the following amplification conditions: 95 °C for 5 min, followed by 36 cycles of 95 °C for 20 s, 59 °C for 30 s, and 72 °C for 30 s. PCR products (229 bp) were detected by 3% agarose gel electrophoresis.
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6

ChIP-IT Assay for ABCA1 Promoter Analysis

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The chromatin immunoprecipitation (ChIP) assay was performed by the ChIP-ITTM kit (Active Motif). Chromatin was immunoprecipitated with 2 μg of antibody of either FoxO1, TFIID, or control IgG. The harvested DNA was detected by real-time PCR and PCR to harvest the FRS fragment from −641 to −472 in the human ABCA1 promoter sequence by using sense and antisense primers 5′-AATCTCCAAGGCAGTAGGTCG-3′ and 5′-GAATCTCCCTCAGGACGCCAA-3′ [17 (link)]. PCR was performed with the TAKARA PCR thermal cycler MP in the amplification program: 95 °C for 5 min, followed by 36 cycles of 95 °C for 20 s, 61 °C for 30 s, and 72 °C for 30 s. The products of the PCR (169 bp) were detected by 3% agarose gel electrophoresis.
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