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6 protocols using cell trace red

1

Plasma-Induced Tumor-Myeloid Cell Interactions

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Four hours after plasma treatment, tumor cell culture supernatants were collected, centrifuged at 1000× g for 5 min to discard residual cells and debris, and stored at −20 °C until use. For experiments, 80 µL of this supernatant was added to wells of a flat-bottom 96-well plate (Eppendorf, Hamburg, Germany). To each well, 20 µL of a cell suspension containing 1 × 104 of either THP-1 or HL-60 cells was added. The myeloid cells were incubated for up to 96 h. The Eppendorf 96-well plates have an outer rim that was filled with deionized water to prevent excessive evaporation from the outer wells, as observed with extensive culture durations. For the co-culture of prostate cancer and myeloid cells, the 96-well plates were coated with 0.01% poly-l-lysine. 2.5 × 104 (LNCaP) or 1.25 × 104 (PC3) in 100 µL of cell culture medium cells were labeled with trace violet (Thermo Fisher Scientific, Dreieich, Germany) before being added to each well. The cells were exposed to the gas plasma and incubated for another 30 min in the incubator. Subsequently, 2.5 × 104 or 1.25 × 104 THP-1 or HL-60 cells were labeled with cell trace red (Thermo Fisher Scientific, Dreieich, Germany) and added to the tumor cells together with sytox green (Thermo Fisher Scientific, Dreieich, Germany) for the identification of terminally dead cells.
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2

Fluorescent Labeling of Immune Cells

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Sorted BM Ly6G Int and Ly6G Hi neutrophil populations, and CD3 + T cells enriched from the spleen of naïve mice, were incubated for 15 minutes at 37°C with CellTrace CFDA-SE (ThermoFisher), CellTrace Yellow (ThermoFisher) or CellTrace Red (ThermoFisher) diluted in sterile PBS. Cells were washed in
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3

Treg-mediated Suppression of T Cell Proliferation

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Treg cells were isolated from recipient PBMCs and commercial normal PBMCs (ePBMC®, Cellular Technology Limited, Shaker Heights, Cleveland, USA; as a healthy control) using the CD4+CD25+CD127dim/− Treg Isolation Kit α (Miltenyi Biotec, Bergisch Gladbach, Germany) and an AutoMACS separator (Miltenyi Biotec). Isolated Treg cells labelled with CellTraceRed (CTR, Invitrogen) were co‐cultured with autologous sorted CD8+CD25 and CD4+CD25 T cells (as responder cells) labelled with CellTraceViolet (CTV, Invitrogen) in the presence of anti‐CD3/CD28. A total of 2 × 104 responder T cells were co‐cultured at different ratios with isolated autologous Treg cells. After 5 days of co‐culture, the proliferative activity of the CD8+ responder T cells was measured by calculating the percentage of dividing CTVlo cells. The percentage of suppression was calculated as [% Suppression = 100 − {(division index of responder T cells only)/(division index of responder T cells in co‐culture with Treg cells)} × 100].
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4

Tularemia Infection Staining Protocol

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BMDMs were infected for 18 hr and then stained with calcein-AM following the manufacturer’s protocol (Invitrogen, Grand Island, NY). Uninfected BMDMs were concurrently stained with Cell Trace Red (Invitrogen) following the manufacturer’s protocol. The different populations were either fixed immediately for controls or combined and co-incubated for 6 hr. The cells were then stained for F. tularensis as described above.
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5

PLGA Nanoparticle Formulation and Characterization

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PLGA (Resomer RG 502 H, lactide/glycolide molar ratio 48:52 to 52:48) was purchased from Boehringer Ingelheim (Germany). Solvents for PLGA preparation (dichloromethane) were obtained from Merck (Germany). Polyvinyl alcohol (PVA) was obtained from Sigma (The Netherlands). R848 was from Enzo Life Sciences poly I:C from Sigma-Aldrich, and endotoxin-free OVA from Hyglos. OVA (257 – 264) SIINFEKL and HPV16 E7(49–57) obtained from Anaspec. α-GalCer was purchased from Funakoshi Co. Ltd. Dimethyl sulfoxide (DMSO) ≥99.9% and Tween 20 was obtained from Sigma (The Netherlands). Atto647N was obtained from Atto-tec GmbH. RPMI 1640 medium (Life Technologies Inc..). PE-conjugated CD3, APC-Cy7 conjugated CD45.2 (BD Biosciences), PerCP conjugated CD8+α (Biolegend), and APC-conjugated H2-Kb/SIINFEKL-Tetramer (Sanquin), PE conjugated CD1d- α-GalCer dextramer (Immudex),FITC conjugated CD11b, PE/Cy7 conjugated CD11c, Alexa488 conjugated F4/80 and NK1.1 (Biolegend), PE/Cy7 conjugated CD154 (Biolegend), Celltrace CFSE, Celltrace- violet and Celltrace red (Life technologies Inc.), were used in flow cytometric cell staining. For the depletion studies, anti-mouse CD4+ antibody clone GK1.5 was obtained from BioXcell. For the detection of CD4+ populations PerCP/Cy5.5 conjugated anti-mouse CD4+ antibody clone RM4-4 was obtained from Biolegend.
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6

Allogeneic PBMC Proliferation Assay

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Donor peripheral blood mononuclear cells (PBMCs) were irradiated at 3000 cGy and were cultured in 1:1 ratio with recipient PBMCs in medium RPMI 1640 (hyclone, GE Healthcare) with 10% fetal bovine serum, penicillin (10 U/mL), and streptomycin (10 g/mL). For proliferation assays, 10 5 recipient PBMCs per well were cultured with 10 5 irradiated donor cells per well in 96-well round-bottom plates. Both PBMCs from recipients and donors were labeled with a cell division tracking dye, CellTrace Violet (CTV) and CellTrace Red (Life Technologies, Gaithersburg, MD), respectively. In brief, sample PBMCs were incubated with 5 µmol/L CTV for 20 minutes at room temperature and washed twice. Co-cultured cells were continued for 6 days, and CTV proliferation was defined and assessed as CTV low . The following antibodies were used in an appropriate combination of fluorochromes: anti-CD3-BV510 (HIT3a), anti-CD8-BV711 (RPA-T8), anti-CD14-PE-eFluor 610 (61D3), anti-CD19-PE-eFluor 610 (HIB19), anti-CD4-PECy5 (RPA-T4), anti-CD45RA-APC-H7 (HI100), Anti-IFNg-BV650 (4S.B3), anti-IL-2-FITC (MQ1-17H12), anti-CD107a-PE (H4A3), anti-TNFa-PeCy7 (Mab11), and anti-Foxp3-Alexa 700 (PCH101).
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