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Zen blue software version 2

Manufactured by Zeiss

Zen Blue software version 2.5 is a comprehensive imaging and analysis solution for microscopy. It provides a user-friendly interface for image acquisition, processing, and data management. The software supports a wide range of microscopy techniques and is compatible with various Zeiss imaging systems.

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2 protocols using zen blue software version 2

1

Immunohistochemical Analysis of Mouse Brain

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Mouse brains (n = four for control wild type, R26GT-Map2k1-GFP/+ or Tg-Cdh5CreER+/− and n = 4 for mutant R26GT-Map2k1-GFP/+; Tg-Cdh5CreER+/−) were fixed in formalin, embedded in paraffin, sectioned (seven µm), and hematoxylin/eosin stained. Tissue undergoing immunostaining were flash frozen in OCT and stored at − 80 °C. Seven µm cryo-sections were cut. Primary antibodies used: rabbit anti-mouse COL15A1 (Gift from Dr. Karppinen, University of Oulu, Finland) (1/500) and rat anti-mouse CD31 (1/500) (BD Pharmigen: 553370). Secondary antibodies used: donkey anti-mouse IgG (H + L) Alexa Fluor 488 (Abcam 150105, 1/200); donkey anti-rabbit IgG (H + L) rhodamine red-X (1/500) (Jackson ImmunoResearch 712-295-150). Sections were mounted with DAPI Fluoromount-G (SouthernBiotech). Images of sections were obtained using an Eclipse 80i microscope (Nikon) with a Spot model 25.4 camera and Spot 5.2 software (Diagnostic Instruments). Confocal images were captured using a Zeiss LSM 800 confocal microscope and Zen Blue software version 2.5.
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2

Multimodal Imaging of Biological Samples

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Whole mount bright field and fluorescent images of ears, intestines and brains were taken with a Nikon SMZ18 stereomicroscope with a Nikon digital sight DS-U3 camera using NIS-elements AR 4.4 software. Fluorescent images of ear immunostainings were obtained with an Eclipse 80i microscope (Nikon) with a Spot model 25.4 camera using the Spot 5.2 software (Diagnostic instruments). Images of brain sections were taken with an Eclipse 80i microscope equipped with a digital sight DS-Ri1 camera using NIS-elements AR 3.2 software (Nikon). Confocal images were obtained using a Zeiss LSM 800 confocal microscope and Zen Blue software version 2.5. Confocal imaging of GFP expression in brain was performed on non-fixed tissues. Confocal imaging of GFP and CD31 expression of ear lesions was carried out with fixed and immunofluorescent stained samples. Images were adjusted for brightness and contrast using Adobe Photoshop version 23.3.
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