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4 protocols using anti sheep cy3

1

Multiplex Visualization of Neuronal Connectivity

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Sections from experiments 1, and 4 were analyzed at high power to study the neuronal connectivity of CART-IR neurons. In an additional quadruple-labeling study, the primary antibody cocktail from experiment 1 was supplemented with a polyclonal guinea pig GnRH antiserum (#1018; 1∶3000) [25] (link). This was followed by the cocktail of secondary antibody-fluorochrome conjugates: anti-guinea pig-AMCA, 1∶50; anti-mouse-FITC, 1∶250; anti-sheep-Cy3, 1∶1000; anti-rabbit-Cy5, 1∶500 (Jackson ImmunoResearch Laboratories) for 5 h. The visualization of KP, NKB and CART was carried out as in experiments 1 and 2. The AMCA signal for GnRH was overlaid to this three-color image in a separate Adobe Photoshop layer (screen mode), after being converted to a brown pseudocolor.
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2

Immunostaining of Endothelial Markers

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Human tissue slides were removed from a −80 °C freezer, postfixed in ice-cold methanol for 10 min, and briefly washed in 0.1 M PBS. Sections were incubated for 2 h in 5% normal donkey serum (NDS) and 0.1% Triton X-100 (Fisher Bioreagents, BP151-100) in 0.1 M PBS for 2 h, before being incubated overnight at 4 °C with primary antibodies (rabbit anti-Cldn5, 1:250, Thermo Fisher Scientific, 34-1600 and sheep anti-hCD31, 1:250, R&D Biosystems, AF806). Slices were washed three times in 0.1 M PBS for 5 min and incubated with anti-rabbit Cy2 and anti-sheep Cy3 secondary antibodies for 2 h at room temperature (1:400, Jackson Immunoresearch, 711-225-152, 713-165-147, respectively). Sections were again washed three times in 0.1 M PBS and counterstained with DAPI to visualize nuclei. Slices were mounted and coverslipped with ProLong Diamond Antifade Mountant (Invitrogen, P36961). Images were acquired from 6-μm flattened z-stacks on a LSM-700 confocal microscope (Carl Zeiss) using a 20× lens with a resolution of 512 × 512 and a zoom of 1.0.
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3

Identifying CART-IR and SP-IR Subpopulations

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To determine whether the CART-IR and the SP-IR subpopulations of KP and NKB neurons are identical or different, the primary antibody cocktail used in experiments 1 and 2 was supplemented with a rat monoclonal SP antibody (Serotec #8450-0505; Bio-Rad Laboratories, Inc., Hercules, CA; 1∶3,000) [33] (link). Following a 48-h-incubation in this mixture at 4°C, a cocktail of four different secondary antibody-fluorochrome conjugates were applied to the sections for 5 h at room temperature: anti-rat-AMCA, 1∶50; anti-mouse-FITC, 1∶250; anti-sheep-Cy3, 1∶1000; anti-rabbit-Cy5, 1∶500 (ea. from Jackson ImmunoResearch Laboratories). The visualization of the first three neuropeptides (KP, NKB and CART) was carried out as in experiments 1 and 2, whereas the SP signal was illustrated separately in a parallel black-and-white image. The presence/absence of quadruple-labeled neuronal elements was determined by switching between the superimposed Photoshop layers.
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4

Immunofluorescence Staining of Golgi and Membrane Proteins

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Cells were grown on glass coverslips for one day, then fixed with 3% PFA for 10 min, quenched with 50 mM NH4Cl in PBS for 5 min, permeabilized with 0.2% TritonX-100 in PBS for 10 min, blocked with 1% BSA in PBS for 1 h, and incubated with primary antibodies diluted in 1% BSA in PBS for 1 h: Anti-AP1g1 (1:1000, self-made from hybridoma cells), anti-bCOP (1:500, CM1, hybridoma supernatant, gift from Dr. Felix Wieland, Heidelberg University), anti-GGA2 (1:500, BD Bioscience 612613), anti-GM130 (1:1000, Cell Signaling 12480S), and anti-TGN46 (1:1000, BioRad AHP500G). Samples were washed and incubated with fluorescent secondary antibodies diluted in 1% BSA in PBS for 1 h (1:400; anti-mouse-Alexa488, Invitrogen A21202; anti-rabbit-Alexa568, Invitrogen A10042; anti-sheep-Cy3, Jackson ImmunoResearch 713-165-147). Coverslips were mounted in FluoromountG (SouthernBiotech) supplemented with 0.5 ng/ml DAPI (Sigma-Aldrich) and stored in the dark at 4°C. For localization of GFP-KDEL, cells were grown on coverslips for one day, transfected with the pcDNA3-ss-GFP-KDEL, and fixed and stained a day later.
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