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Imagequant tl 7

Manufactured by Cytiva
Sourced in United States

The ImageQuant-TL-7.0 software is a comprehensive image analysis tool designed for quantitative analysis of gels, Western blots, and other types of digital images. It provides a suite of tools for image capture, processing, and analysis, enabling researchers to accurately measure and quantify bands, spots, and other features within their samples.

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7 protocols using imagequant tl 7

1

Measuring Light Transmission of Suberin

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Solutions of suberin co-monomers and polymer were prepared at 1 mM concentration in toluene solvent and dispensed into 300 mm × 12.7 mm o.d. Teflon tubes that were fitted with optical quartz windows. Each tube was wrapped in aluminum foil and placed in the dark box (Figure 1) configured for measuring light transmission through the tube using the halogen lamp (Figure 5).
Light registered by the camera sensor was quantified using ImageQuant™ TL 7.0 software (Cytiva Life Sciences, Inc., Marlborough, MA, USA) and recorded as the fractional light transmission with water having a value of 1.0.
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2

Spatial Mapping of Isotope Dynamics in Plants

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After incubation with 11C, plants were harvested. Sink leaves were laid out and radiographic images acquired by exposing phosphor plate films for on average 10 min. For plants grown in soil, phosphor plates were laid directly onto the root-soil matrix and exposed for 40 min. For plants grown in hydrogels, the roots were gently removed and laid out on a foam imaging surface onto which the phosphor plate was placed over them. Phosphor plates were read using a Typhoon 9000 imager (Typhoon™ FLA 9000, GE Healthcare, Piscataway, NJ, USA). Images were quantified using ImageQuant™ TL 7.0 software (Cytiva Life Sciences, Inc., Marlborough, MA, USA) to determine the extent of sectoriality both within sink leaves and in roots. For leaf tissue, levels of radioactivity were determined for the left-side and right-side of each sink leaf using the midrib as the dividing line between halves. Similarly, for quantifying root images, the tap root was used as the dividing line distinguishing secondary and tertiary roots on the left-side and right-side of the tap root.
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3

Western Blot Analysis of Apoptosis Biomarkers

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Biomarkers of apoptosis were assessed by Western blotting as follows. Treated cells were washed in PBS, resuspended in sodium dodecyl sulfate (SDS) sample buffer, sonicated for 5 s, and then boiled for 5 min. After brief centrifugation, equal amounts of total protein from each sample were fractionated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to a polyvinylidene difluoride membrane. The transblotted membrane was washed thrice with Tris-buffered saline (TBS) containing 0.05% Tween 20 (TBST). After blocking with TBST containing 5% nonfat milk for 60 min, the membrane was incubated with an appropriate primary antibody at 1 : 1000 dilution in TBST-5% low-fat milk at 4°C overnight and then washed thrice with TBST. The membrane was probed with goat anti-rabbit or anti-mouse IgG-horseradish peroxidase conjugate (1 : 10000) for 1 h at room temperature and washed thrice with TBST. The hybridized immunocomplex was detected with Renaissance Chemiluminescence Reagent Plus (NEN Life Science Products, Boston, MA, USA). The quantitative analysis of Western blotting was carried out using the ImageQuant-TL-7.0 software, version 2010 (Amersham Biosciences).
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4

Quantitative Western Blot Analysis of Tissue Proteins

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Each tissue lysate sample was electrophoresed through a precast gel (NuPAGE, 4–12% Bis-Tris Gel, 1.5 mm, Invitrogen, Carlsbad, CA). Proteins were transferred from the gel to a polyvinyldifluoride (PVDF) membrane (Millipore, Bedford, CA) and blocked with 5% milk in PBS (adjusted to pH 7.4) containing 0.05% Tween-20. The membranes were then separately incubated overnight with primary antibodies (1 ug/ mL) of anti- FSTL1, anti- Cathepsin B, anti- TGF-β, anti-PREX2 and anti-β-actin. After washing, the membrane was incubated with alkaline peroxidase-conjugated AffiniPure goat anti-rabbit IgG (111-035-003, Immuno Research) for 1 h (1:10,000). Proteins were detected with an enhanced chemiluminescent (ECL) system, and quantitative analysis of Western blotting was carried out using the ImageQuant-TL-7.0 software, version 2010 (Amersham Biosciences).
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5

Protein Expression Confirmation by Western Blotting

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Confirmation of protein expression was performed by Western blotting. Each cell lysate sample (1 μg/μL, 10 μL) was electrophoresed through a precast gel (NuPAGE Novex 4–12% Bis-Tris Gel, 1.5 mm, 10 wells, Invitrogen, Carlsbad, CA). Proteins were transferred from the gel to a polyvinyldifluoride (PVDF) membrane (Millipore, Bedford, CA) by means of the semidry technique using the Criterion Blotter (Bio-Rad) at 100 V for 60 min and blocked with 5% milk in PBS (adjusted to pH 7.4) containing 0.05% Tween 20. The membrane was then incubated overnight with primary rabbit antibody (1 μg/mL) of anti-CD44 (1998-1, Epitomics, Inc.). After washing, the membrane was incubated with alkaline peroxidase-conjugated AffiniPure goat anti-rabbit IgG (111-035-003, Immuno Research) for 1 h (1 : 10000). Proteins were detected with an enhanced chemiluminescent (ECL) system, and quantitative analysis of Western blotting was carried out using the ImageQuant-TL-7.0 software, version 2010 (Amersham Biosciences).
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6

Protein Expression Analysis via Western Blotting

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The cell suspension was diluted with PBS (pH 7.2–7.4) until the cell concentration reached about 1 million/mL. Through repeated freezing and thawing or addition with tissue protein extraction reagents, the cells were destroyed to release the intracellular components. After centrifugation (3000 rpm, 15 min), the supernatant was collected. Western blotting was performed according to the method of Song et al. [28 (link)]. Briefly, samples were loaded onto a sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) system (Beyotime) and transferred to polyvinylidene fluoride (PVDF) membranes electrophoretically (Millipore, Billerica, MA, USA). The membranes were blocked with 5% non-fat milk in Tris-buffered saline and Tween 20 for 1 h at room temperature. The membranes were then rinsed three times consecutively with a TBST buffer, and then incubated for 1 h with 1:1000 of primary monoclonal antibodies: β-actin, Nrf-2, HO-1, GCLC, p38, keap-1, JNK1/2 and ERK1/2 (Cell Signaling Technology, Shanghai, China) in a TBST buffer containing 1% skim milk. After that, secondary antibodies reacted with the bolts at room temperature for 2 h before visualization and analysis by densitometric scanning (Image Quant TL7.0, GE Healthcare Bio-Sciences AB, Mississauga, ON, Canada). Band density was quantified using ImageJ (National Institute of Health, Bethesda, MD, USA).
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7

SDS-PAGE Analysis of Caspase-2 Variants

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Caspase-2 variants were detected on one-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) according to Stargardt et al. [44 (link)]. A ready-to-use molecular weight marker (Mark12™, Unstained Standard, Invitrogen, Waltham, MA, USA) was directly loaded as the size marker. The concentration of the soluble and insoluble fraction was calculated from densitometry analysis of SDS-PAGE gels using the software ImageQuantTL (7.0) (Cytiva, Uppsala, Sweden) via linear regression analysis. Purified T7AC-cpCasp2 (75, 50 and 25 µg/mL) was used as the standard. Two replicates of each sample were analyzed two times and the maximal coefficient of variation of 10% was used as acceptance criterion.
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