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316 protocols using eclipse ni u

1

Fluorescence Imaging for ROS Detection

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For RIN-14B cells, for taking green fluorescence photography with the ROS kit, cells were incubated with 15 mM DCFH-DA work solution for 30 min at 37 °C, washed thrice with PBS and photographed with a fluorescence microscope (Nikon Eclipse Ni-U) within 15 min.
When it comes to orange fluorescence photography with DHE kit, cells were incubated with 20 mM DHE work solution for 30 min at 37 °C, washed twice with PBS and photographed with a fluorescence microscope (Nikon Eclipse Ni-U) within 15 min.
For larval zebrafish, after incubation with 15 μM DCFH-DA work solution (diluted with embryo water) for 30 min at 27 °C, 6 larval were transferred into 200 mL embryo water for 3 min to wash the DCFH-DA physically absorbed on the body surface, then stained cutaneous cells with DAPI (Sigma, USA) to highlight the green fluorescence from the cells in which ROS were accumulated. Larval zebrafish were kept into the 3.5% sodium carboxymethylcellulose (CMC-Na) on a glass slide for fixation. The images were captured immediately using a fluorescence stereoscope (Nikon Eclipse Ni-U), and all the captures were taken in the dark room with the same parameters (exposure time, ISO and aperture) for comparison with different groups.
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2

Microscopic Observation of Cyanobacterial Strains

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Cyanobacterial colonies and cells of wild-type and vp28-mOrange mutant of S. elongatus were observed under a fluorescence microscope (Nikon Eclipse NI-U, Japan) using mOrange filters (ET530/30x; ET575/40m). The cyanobacterial colonies on a solid medium were observed under a 4-fold objective lens directly. Cells in liquid medium were dropped onto a glass slide and observed under a 20-fold objective lens directly. Exposure times were 350 ms and 1500 ms.
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3

Paraffin Microtome and Immunohistochemistry

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The experimental equipment were a paraffin microtome (RM2235, Leica Microsystems, Inc.), a microtome (YT-7FB, Leica Microsystems, Inc.), an automatic immunohistochemistry machine (Benchmark XT, Ventana Medical Systems, Inc.), and an optical microscope (ECLIPSE Ni-U, Nikon Corporation, Japan).
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4

Characterization of Ionic Liquid-Polystyrene Microsphere Interactions

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SEM imaging was conducted with Nova NanoSEM 450 at an acceleration voltage of 5.0 kV and probe current of 15 μA. EDS characterization of chemical elements distribution was finished at the acceleration voltage of 10.0 kV. X-ray photoelectron spectroscopy (PHI5802) measurements were performed with 300 W Al Kα radiation. We investigated the capillary flow by adding polystyrene microspheres (diameter of ~18 μm, Sigma-Aldrich) into 1-Octyl-3-methylimidazolium chloride followed by hand stirring for 5 min and ultrasonic dispersion (Kun Shan Ultrasonic Instruments, KQ-100E) for 10 min. Optical observation of the polystyrene microsphere movement was recorded with a computer-connected Nikon microscope (Eclipse Ni-U). Water content and weight of the IL drop were characterized using analytical balance (ME54T, Mettler-Toledo International Inc.) with real-time recording.
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5

Polarization-Dependent Scattering of Single Gold Nanocrystals

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The single-particle measurements were performed on a Nikon Eclipse Ni-U upright optical microscope. Taking GNCs-Pt for example, the GNCs-Pt were firstly immobilized on the pretreated glass slide surface (22 × 22 mm2). Then, the scattered light from individual GNCs-Pt was measured with an objective (40×, numerical aperture (NA) = 0.75) and captured by a sCMOS camera (Orcaflash 4.0, Hamamastu, Japan. Pixel size 6.5 × 6.5 μm2). To measure the polarization-dependent scattering signal from individual GNCs-Pt, a polarizer was put below the oil dark-field condenser. Through rotating the optical axis of the polarizer (from 0° to 360°), the orientation-dependent scattering signals from single GNCs-Pt were recorded by the sCMOS camera. All images were processed with ImageJ.
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6

Monocyte Migration Assay Protocol

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Migration of monocytes toward RPS or APS was performed with a modified Boyden chamber as described previously56 (link). In short, isolated monocytes were loaded onto the upper chamber. Control medium, resting (RPS), activated (APS), or MCP-1 was loaded in the lower chamber. After incubation for 4 h at 37 °C, the membrane was fixed with 100% ethanol and stained with May-Gruenwald/Giemsa. The membrane was mounted on glass slides, and five randomly selected images were taken (Nikon Eclipse Ni-U, ×20 objective). The number of migrated cells was counted for each well in several microscopic fields per condition using ImageJ software to quantify the cell count (ImageJ, National Institutes of Health, USA)57 (link).
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7

Quantifying Cellular Viability in 3D Gels

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After 7 days, cellular viability was analyzed in the 3D gels. For this purpose, gels were washed with phosphate-buffered saline (PBS) and incubated with a Live/Dead stain (Live/Dead Cell Double Staining Kit, Sigma Aldrich) at 37 °C for 15 minutes.
Gels were then imaged by using an upright microscope equipped with transmitted illumination and epifluorescence (Eclipse Ni-U, Nikon)53 to discriminate live cells (calcein AM stained-green) from dead cells (propidium iodide stained-red).
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8

Immunohistochemical Analysis of Dystrophin, Laminin, and GFP

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Tissue sections were re-warmed for 30 min at RT and blocked with 5% BSA for 1 h at RT, followed by incubation overnight at 4 °C with one or two of the following primary antibodies: rabbit anti-dystrophin (1:200; Abcam), rabbit anti-laminin (1:200; Abcam), and chicken anti-GFP (1:1000; Abcam). After washing, the tissue sections were incubated for 1 h at RT with one or two of secondary antibodies: Alexa Fluor 350-conjugated goat anti-rabbit IgG (1:1000; GeneCopoeia, Rockville, MD, USA) and Alexa Fluor 488-conjugated goat anti-chicken IgG (1:1000; Invitrogen). Immunoreactivity was visualised using a fluorescence microscope (ECLIPSE Ni-U; Nikon, Tokyo, Japan).
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9

Nrf2 Immunofluorescence in Rat Cardiac Fibroblasts

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Neonatal rat cardiac fibroblasts were cultured on sterile glass and treated by different agents. NRCF were washed with PBS for once and fixed with 4% formaldehyde in PBS for 15 min at room temperature. The cells were permeabilized with 0.5% Triton X-100 in PBS for 20 min and blocked with 5% goat serum for 1 h at room temperature and then incubated with anti-Nrf2 antibody (1:200, CST) overnight at 4°C. NRCF were incubated with the fluorescent secondary antibody in 3% BSA in PBS and counterstained with DAPI for 10 min at room temperature in the dark. The cells were imaged with an inverted fluorescence microscope (Nikon Eclipse Ni-u, Japan). Green fluorescence was considered a marker of Nrf2 positivity.
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10

Oxidative Stress and Inflammasome in Prostate

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RWPE-1 cells treated with DHT and/or MitoQ (25, 50, and 100 μM) were fixed in 100% methanol, blocked with 10% normal goat serum (Gibco®), and incubated with primary antibodies against 8-OHdG (Cat. No. sc-66036; Santa Cruz Biotechnology), NLRP3 (Cat. No. NBP2-12446, Novus Biologicals), and AR (Cat. No. sc-7305) overnight. The cells were then washed and incubated with FITC-conjugated anti-mouse or TRITC-conjugated anti-rabbit secondary antibodies. Nuclei were stained with 4′,6-diamidino-2-phenylindole (Life Technologies). Images were captured using an optical microscope (ECLIPSE Ni-U, Nikon, Tokyo, Japan).
After deparaffinization and rehydration, rat prostate tissue slides were incubated with anti-mouse 8-OHdG antibodies or anti-rabbit NLRP3 antibodies and visualized with FITC-conjugated anti-mouse and TRITC-conjugated anti-rabbit secondary antibodies, respectively. The slides were mounted and detected using a Nikon X-Cite-Series 120 Q microscope (Nikon, Japan). The exposure parameters were the same for each sample.
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