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29 protocols using p nitrophenyl palmitate p npp

1

Extraction and Characterization of Skipjack Tuna Eyeball Oil

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The chemicals used in this study were of analytical grade. Commercial butterfat (Allowrie Foods Australia, Sydney, Australia) was purchased from a local supermarket and used as CBF. p-nitrophenyl palmitate (p-NPP) was acquired from Sigma-Aldrich (St. Louis, MO, USA).
The skipjack tuna eyeball oil (STEO) was extracted following the method of Pudtikajorn et al. [15 (link)]. Briefly, tuna eyeballs were chopped into small pieces using a chopper (Electrolux model EFP7804S, Stockholm, Sweden) for 1 min. The disintegrated eyeballs were mixed with distilled water (1:1, w/v) and transferred into 250 mL airtight bottles (DWK Life Sciences GmbH, Mainz, Germany) and autoclaved (TOMY model SX-500E, Tokyo, Japan) at 121 °C for 60 min. The bottles were cooled down using running tap water. The mixtures were centrifuged at 3000× g at room temperature for 5 min. Cheesecloth was used to remove the upper floating phase and the emulsion was subsequently subjected to centrifugation at 10,000× g at room temperature for 10 min. The oil phase on the top was removed with a separating funnel, 20% of anhydrous sodium sulfate was added, and this was named as skipjack tuna eyeball oil (STEO).
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2

Screening and Characterization of Thermophilic Lipase Producers

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Two hundred fifty bacterial isolates, used in this study, were isolated from different soils (Zarenejad et al., 2012 (link)) and wastewaters of leather and edible oil industries (in this study) of Tehran, Iran. Lipase-positive colonies were detected by formation of clear halo on Luria-Bertani (LB) agar containing 0.5% (v/v) olive oil after 48 h of incubation at 37 °C. Among all isolates exhibiting lipolytic activity, isolates showing greater clear zones were subjected to hydrolysis of p-nitrophenyl palmitate (pNPP) (Sigma-Aldrich, Germany) at high temperature (50 °C) and alkaline conditions (pH range 9.0–10.0). Out of all isolates, one (Bn12) was selected for further studies because it showed the largest clear halo and superior hydrolysis activity at mentioned conditions.
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3

Evaluation of Chrysin for Metabolic Disorders

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Chrysin, porcine PL and p-nitrophenyl palmitate (p-NPP) were procured from Sigma Aldrich®, India. The rat normal chow was procured from Krishna Valley AgroTech, Maharashtra, India and fructose was obtained from Tate & Lyle, United Kingdom. Orlistat was provided as a gift sample by Macleods Pharmaceuticals Ltd., Mumbai, India. Intralipid® 20% was procured from a local pharmacy. The kits for the estimation of triglycerides (TG) and cholesterol were procured from Erba Mannheim®, Germany. All other chemicals used in this study were of analytical grade.
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4

Enzymatic Modification of Lutein via CALB

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Candida antarctica lipase B (CALB, liquid, enzyme activity 5000 U mL−1) was supplied by Beijing Gaoruisen Biological Technology Co., Ltd (Beijing, China). Lutein (75%) and succinic anhydride were purchased from Aladdin (Shanghai, China). Dicyandiamide (DCDA, 99%) and p-nitrophenylpalmitate (p-NPP, Aldrich, 99%) were obtained from Sigma-Aldrich (St. Louis, USA). Chromatographically pure methyl alcohol, acetonitrile, and acetic acid were purchased from Merck Biotechnology Co., Ltd (Shanghai, China). The BCA Protein Assay Kit was obtained from Shanghai Yuanye Biotechnology Co., Ltd (Shanghai, China). GA solution (25%), dimethyl sulfoxide (DMSO), chloroform, methyl tert-butyl ether, acetone, and DMF were supplied by Sinopharm Chemical Reagent Co., Ltd (Shanghai, China).
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5

Isolation and Characterization of Chestnut Lipase

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Korean chestnuts (Castanea crenata) were purchased from local markets. They were peeled, sealed in a vacuum plastic bag, and stored at 4 °C for subsequent use. Before use, the chestnuts were covered with a layer of wet cotton and allowed to germinate for 3 days at 18 °C.
HiTrap DEAE Sepharose Fast Flow, HiTrap Q Sepharose Fast Flow, and HiPrep Sephacryl S-100 HR were purchased from Cytiva (Uppsala, Sweden). Trizma® base (≥ 99.9%), diethyl ether (≥ 99.9%), p-nitrophenyl palmitate (p-NPP), sodium dodecyl sulfate (SDS), isooctane (IOT), tributyrin, tricaproin, tricaprin, trilaurin, tripalmitin, and triolein (≥ 99.0%) were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). Ammonium sulfate (≥ 99.5%), Triton X-100, sodium chloride (≥ 99.5%), and agar were purchased from Junsei Chemical Co., Ltd. (Tokyo, Japan). Boric acid, potassium chloride, and oleic acid were obtained from Duksan Pure Chemicals Co., Ltd. (Ansan, Gyeonggi-do, Korea). The Costar® 96-well microplates (clear wall, clear bottom) used for the fluorometric assay were purchased from Corning Co. (Corning, NY, USA). All other chemicals were of analytical grade and were used without further purification.
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6

Catalytic Activity of Immobilized Enzymes

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The substrate for the catalytic tests was p-nitrophenyl palmitate (p-NPP) purchased from Sigma-Aldrich. This substrate was dissolved in 1% isopropanol, 2% Triton X-100 as emulsifier, and 50 mmol·L−1 Tris buffer pH 8.0 [29 ]. For the immobilized enzyme 0.7 g of microspheres was used. A negative control without the enzyme was also studied, and the reaction mixture in each set was incubated for 60 min, stopping the reaction by removing the immobilized enzyme using a sieve. The assays were performed in triplicate.
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7

Graphene-Based Enzymatic Catalysis

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Graphene flakes were purchased from Sigma-Aldrich (St. Louis, MO, USA), and used without further purification. Candida rugosa lipase (lyophilized powder, Type VII, 700 U/mg solid) and p-nitrophenylpalmitate (p-NPP) were also purchased from Sigma-Aldrich. Phosphate buffer solution (PBS, 0.1 M, pH = 7.0), which was prepared by mixing standard stock solution of 0.1 M KH2PO4 and 0.1 M K2HPO4, was used as the supporting electrolyte. Unless otherwise stated, reagents were of analytical grade and used as received.
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8

Characterization of Lipase YCJ01 from B. ambifaria

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The lipase YCJ01 from B. ambifaria was characterized in our previous report, and its amino acid sequence was assigned GenBank accession no. JQ733583. B. ambifaria YCJ01 was deposited in CCTCC (Wuhan, China) with the accession number CCTCC M 2011058.18 (link) 3-Aryloxy-1,2-propanediols were purchased from Heowns Biochemical Technology LLC (Tianjin, China). p-Nitrophenyl palmitate (pNPP) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Vinyl acetate, isopropyl ether and all other chemicals were purchased from Sinopharm Chemical Reagent Co., Ltd. (Shanghai, China). All reagents were used directly without any further treatment.
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9

Lipolytic Activity Determination Protocol

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Lipolytic activity was determined according to Kotogán et al. [45 ], with slight modifications. A crude enzymatic extract was obtained after inoculation of two plugs (5 mm of diameter) in 50 mL of PDB medium. p-nitrophenyl palmitate (pNPP; Sigma-Aldrich, Lisbon, Portugal) was used as substrate. A stock solution (3 mM) was prepared in 25% dimethyl sulfoxide and 0.5% of Triton X-100 and completed with potassium phosphate buffer (pH 6.8). A volume of 50 µL of buffered pNPP solution was added to 150 µL of crude extract, and incubated at the test temperature for 0 min, 45 min and 90 min. The reaction was stopped by adding 50 µL of 0.1 M sodium carbonate. The released p-nitrophenol (pNP) was measured at 405 nm in 96-well plates using a microplate reader (Biotek, Synergy HT, Winooski, VE, USA). The blank sample was treated as all the samples, replacing the enzymatic crude extract by ultrapure water. The molar absorption coefficient of pNP = 1.2475 × 104 M−1·cm−1) was estimated from the absorbance of pNP standard solutions measured at 405 nm. One enzymatic unit was defined as the amount of the enzyme that releases 1 mmol of pNP per minute.
The quantification of the lipolytic activity was made at 25 °C, 30 °C, 37 °C, 45 °C since higher temperatures lead to spontaneous substrate degradation. Data is presented as mean of three replicates, normalized for mycelium dry weight.
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10

Lipolytic Activity Assay for Acinetobacter

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Lipolytic activity assay was conducted according to the method described by Martínez and co-workers [37 (link)] with some modifications. A. baumannii was grown to the mid-logarithmic phase (OD600 ∼ 0.6). The adjusted cultures were supplemented with the studied extracts and then mixed with an equal volume of the substrate solution. The latter consisted of 2 mM p-nitrophenyl palmitate (pNPP) (Sigma-Aldrich) in 50 mM Tris-HCl (pH 7.2, Sigma-Aldrich) containing 2% ACN (Sigma-Aldrich). The final concentration of the extracts in the assay mixture was 512 µg/mL for both BR and CC and 256 µg/mL for the other 4 species. An aliquot of the reaction mixture was transferred to a flat-bottomed 96-well plate and the p-nitrophenol (pNP) released after pNPP hydrolysis was determined by measuring the absorbance at 410 nm both at time zero and after 3 h of incubation at 37 °C. Samples incubated with the equivalent amounts of DMSO were used as controls.
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