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X tremegene hp

Manufactured by Roche
Sourced in Switzerland, Germany, United States, Italy, United Kingdom

X-tremeGENE HP is a transfection reagent for the efficient delivery of nucleic acids, such as plasmid DNA, into a wide range of mammalian cell lines. It is a ready-to-use solution that can be combined directly with the nucleic acid sample and added to cells.

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379 protocols using x tremegene hp

1

Plasmid Transfection Optimization Protocol

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The cell suspension of proper concentration is made by trypsinized cells in logarithmic growth period; then cells are seeded at 2 × 104 cells per well in a 24-well plate and incubated in a humidified 37°C incubator with 5% CO2 till 60% confluence. Using X-tremeGENE HP (ROCHE) for transfection procedures, (a) for every 1 ug plasmid, 2 ul X-tremeGENE HP reagent is required; X-tremeGENE HP and plasmids at this ratio in 100 ul opti-MEM are mixed thoroughly, and the compound is incubated at room temperature for 20 minutes; (b) the medium in the plate is replaced with 200 ul opti-MEM; (c) the mixture of X-tremeGENE HP reagent and plasmids is added to the well, after that it is incubated in a humidified 37°C incubator with 5% CO2 for 5-6 hours, and then we replace the mixture with complete medium containing 10% FBS; (d) after transfection for 24–48 h, we observe the expression of fluorescent protein marker by the plasmids to determine transfection efficiency. At last, the luciferase activities are measured with the dual-luciferase reporter system (E1910, Promega) according to the manufacturer's instructions.
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2

Visualizing Mitochondrial Dynamics in Chondrocytes

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For immunofluorescence detection of the outer mitochondrial membrane protein, TOM20 chondrocytes were cultured for 24 h on glass coverslips in a 24-well plate, fixed with 4% PFA/PBS for 10 min at RT, permeabilized with 0.5% NP-40/PBS for 10 min, and incubated with 1% FCS/PBS for 30 min at RT. The TOM20 antibody (Santa Cruz) was added, and after 1 h at RT cells were washed three times with blocking buffer and incubated with appropriate Alexa-Fluor–conjugated secondary antibodies and DAPI for an additional 45 min at RT. In addition, chondrocytes were transfected with 1 µg plasmid DNA (pOCT-YFP; Neuspiel et al., 2008 (link)) per well using XtremeGENE HP (Roche) according to the manufacturer’s protocol in a 1:2 ratio (DNA:XtremeGENE HP) to fluorescently label mitochondria (MitoYFP). 24 h after transfection cells were fixed in 4% PFA/PBS for 10 min at RT. After mounting (Dako), images were acquired using a TCS SP5 microscope controlled with LAS AF Software (Leica).
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3

Knockdown and Transfection in Drosophila S2 Cells

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Dcp2 knockdown was performed as previously described (Rehwinkel et al. 2005 (link)). After 1 d of soaking, the S2 cells were transfected with 5 µg pASW-pri-let7 (Fukaya and Tomari 2012 (link)) and 5 µg pAWS-Rluc-let-7-A50-HhR or pAWS-Rluc-let-7-A50C10-HhR using X-tremeGENE HP (Roche) and further cultured for 3 d. For CAF1 knockdown, S2 cells were seeded at a density of 1.0 × 106 cells/mL in 10-cm dishes, and 20 µg dsRNAs were added to the dishes. One day after soaking, S2 cells were transfected with 10 µg pAFW-Ago1 using X-tremeGENE HP (Roche) and further cultured for 3 d. For CCR4 knockdown, S2 cells in 10-cm dishes were soaked with 100 µg dsRNAs. After 3 d, 100 µg dsRNAs were added again, and the cells were cultured for 1 d. Then, the cells were diluted fivefold and transfected with pAFW-Ago1 similarly to CAF1 knockdown. Lysates from S2 cells were prepared as previously described (Fukaya and Tomari 2012 (link)).
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4

Immunofluorescent Labeling of TAP-tagged Constructs

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For immunofluorescent labeling of TAP-tagged constructs, SK-N-AS cells were seeded out on glass coverslips in a 6-well plate at a density of 40 000 cells/cm2 prior transfection. 24 h after seeding, the cells were transfected with 1 μg plasmid DNA using X-tremegene HP (Roche) for 48 h in a ratio of 1:3 (μg DNA:μl X-tremegene HP). After 48 h incubation, transfected cells were washed with 2x2mL of ice cold 1xPBS. Subsequently the cells were fixed and permeabilized with -20°C methanol for 5 min followed by washing with 3x2mL of ice cold 1xPBS. Cells were then blocked in 1x Tris-buffered saline (TBS, 137mM NaCl, 2,7mM KCl, 25mM Tris-Base, pH 7,4) containing 5% bovine serum albumin (BSA) and 1% Tween-20 at room temperature for 1 h. Thereafter, cells were incubated with an Alexa Fluor 488-conjugated donkey anti-goat IgG antibody (Invitrogen, A11055) and DRAQ5 (for DNA staining) at concentrations 1:2000 and 1:5000 respectively, for 1 h at room temperature. Note, TAP-tagged Fe65 was directly detected by the anti-goat antibody due to the protein A domain. The cells were washed 3x500μL/coverslip in 1xTBS containing 1% Tween-20 before mounting on glass slides with Fluoromount-G (SouthernBiotech, 0100–01). Subcellular distribution of immunostained TAP-tagged Fe65 was determined using an imaging system with a Nipcov spinning disc (CSU-22) on a Zeiss Axiovert 200.
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5

Transfection of CHO-K1 Fibroblasts

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Fibroblast CHO-K1 cells, were from American Type Culture Collection(ATCC) and maintained in DMEM medium supplemented with 10% fetal bovine serum (FBS). The cells, plated in 35-mm dishes and grown to confluence, were transfected with 2 μg of DNA and 4 μl of X-treme Gene HP (Roche, Indianapolis, IN), or co-transfeced with 1 μg of each DNA and 4 μl of X-treme Gene HP following the manufacturer's instructions. The cells were used 18-24 h post transfection.
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6

TALEN-Mediated Gene Disruption in HeLa Cells

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(Day 0) HeLa-mCAT8 cells (1.5×105 cells/well in 12-well plates) were cultured overnight. (Day 1) A pair of TALEN plasmids was mixed with X-tremeGENE HP (Roche Diagnostics) (in 12-well plates, 0.5 µg each of plasmids and 2 µl X-tremeGENE HP were mixed in 100 µl Opti-MEM), and then the mixture was added to the cells. (Day 2) The cells were transferred to 6-well plates and cultured at 37°C with puromycin at 5 µg/ml, which is higher than the usual concentration to concentrate cells with a higher expression of TALENs. (Day 3) The plates were moved to 30°C. (Day 4) The medium was changed to puromycin-free medium and the cells were kept at 30°C. (Day 7) The cells were subcultured and grown at 37°C for a few days. The TALEN-treated HeLa cells were harvested for indel analysis and lysenin treatment, or diluted to isolate gene-disrupted clones.
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7

Validating miR-101a-3p and MYCN Interaction

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The potential binding site between miR-101a-3p and MYCN was predicted by the TargetScan 7.2 database (http://www.targetscan.org/vert_72/). The direct interaction between miR-101a-3p and MYCN was determined by a luciferase assay as previously reported (Le et al., 2011). Briefly, 293T cells (CL-0005, Procell Biotechnology, Wuhan, China) were transfected with the miR-101a-3p mimic or NC, and a luciferase reporter vector containing the wild-type (WT; 5′-GAA GUU CAC ACC UAA GUA CUG UA-3′) or mutant (MUT; 5′-GAA GUU CAC ACC UAA UGC AGU GA-3′) by X-tremeGENE HP (Roche, Hilden, Germany). At 48 hours after the transfection, luciferase activity was measured with a Luciferase Assay Kit (Promega Corp., Madison, WI, USA). The ratio between firefly and renilla was calculated to normalize the relative luciferase activity.
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8

Transient Expression of NMDAR Subunits in HEK293 Cells

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For all experiments, we used mammalian human embryonic kidney 293 (HEK293) cells. We obtained from ATCC® a stock of HEK 293 cells (CRL-1573™) in 2016. Multiple aliquots of this stock were made and frozen down in liquid nitrogen. Approximately once per month, we unfreeze one of these aliquots and use for a subsequent time period. Cells derived from these aliquots have displayed highly consistent morphology and growth patterns. If we have concerns about our stocks of HEK 293 cells, we will obtain a new stock of HEK 293 cells from ATCC®.
We transiently co-transfected cDNA constructs of GluN1 and GluN2A into mammalian human embryonic kidney 293 (HEK293) with a separate pEGFP-Cl vector (Clontech) at a ratio of 4.5:4.5:1 (GluN1/GluN2A/EGFP) using X-treme GENE HP (Roche). Cells were grown at 37°C and 5% CO2 in Dulbecco’s modified Eagle’s medium (DMEM) containing 10% fetal bovine serum (FBS) for 24 h before transfection. To increase cell viability via limiting Ca2+ influx, the media bathing transfected cells also contained the NMDAR competitive antagonist APV (100 μM) and non-competitive antagonist Mg2+ (100 μM). Patch clamp recordings were performed 16–48 h post-transfection.
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9

Mouse Wnt Signaling Research Protocol

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cDNAs coding for mouse Wnt3a and Wnt5a, monoclonal antibodies against mouse Wnt3a and Wnt5a, and L cell stably expressing mouse Wnt3a (L-3a) (Shibamoto et al., 1998 (link)) were all kindly provided by Shinji Takada (Okazaki Integrated Bioscience Center, Japan). The Open Source Wnt Project plasmids containing ORF clones for human Wnt proteins (Najdi et al., 2012 (link)) were obtained from Addgene. A cDNA coding for the human afamin was a generous gift from Luc Bélanger (Research Center, L’Hotel-Dieu de Québec, Canada). cDNAs coding for the following proteins were obtained by DNA synthesis based on their reported nucleotide sequences; bovine AFM (NM_001192175), human serum albumin (BC034023), human AFP (BC027881), and mouse VDBP (AK010965). A highly pure, carrier-free recombinant mouse Wnt3a protein was purchased from R&D Systems (catalogue No. 1324-WNP-010/CF). HEK293T, HEK293S GnT1 (kindly provided by G. Korhana), and L-3a cells are maintained in basal media containing DMEM (for HEK lines) or DMEM/F12_1:1 (for L-3a), supplemented with 10% fetal calf serum (FCS). All cell transfection experiments were performed using X-tremeGENE HP (Roche).
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10

TGF-β1-Induced Epithelial-Mesenchymal Transition

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Reagents included: RPMI1640/DMEM medium and foetal bovine serum (FBS) (HyClone, USA); transfection reagent X-tremeGENE™ HP, (Roche, Germany); TRIzol (Life Technologies, USA); polymerase chain reaction (PCR) instrument (Bio-Rad, USA); cDNA synthesis kit (Fermentas, USA); SYBR qPCR Mix/HiScript II (Vazyme Biotech Co., Ltd, Nanjing, China); TGF-β1 (R&D, USA); Thiazolyl blue (MTT) (Sigma, USA); anti-c-Ski (CST, 1: 1000), anti-α-SMA (Abcam, 1: 1000), anti-fibronectin (FN) (Abcam, 1: 1000), anti-p-Smad3 (Abcam, 1: 1000), anti-Smad3 (Abcam, 1: 1000), anti-E-cadherin (Abcam, 1: 1000), anti-β-actin (Abcam, 1: 3000) and HRP labelled secondary antibody (CST, 1: 3000).
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