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8 protocols using culture plate inserts

1

Embryonic Pancreas Explant Culture

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Explant cultures were produced as described in our previous work [23 (link)] with minor modifications. Briefly, E13.5 embryos were harvested and their pancreata were isolated in HBSS (Sigma-Aldrich, St. Louis, MO). The pancreas explants were transferred to culture plate inserts (Millipore, Billerica, MA) in sterile 6-well plates containing RPMI1640 medium (Invitrogen) supplemented with 10% fetal bovine serum, 1% penicillin and streptomycin, 10mM HEPES buffer, and 1x non-essential amino acids (Invitrogen). Group-specified treatments were applied at 37°C in a 5% CO2/95% humidified atmosphere for 3–5 days and the cultures were provided with fresh incubation medium every day.
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2

Culturing Rat Hippocampal Slices

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Brain slice culture was performed by following the method described previously (Fuller and Dailey, 2007 ). In brief, P5 rat hippocampi were cut into 300-µm coronal sections by a tissue chopper after being cut free from the cerebral hemispheres. Then, the slices were separated and cultured on culture plate inserts (Millipore) in MEM containing 25% HBSS, 6.5 mg/ml d-glucose, 25% horse serum, and 1% penicillin-streptomycin in a humidified CO2 incubator.
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3

Tracing Neuronal Connectivity in CA1

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Brains were embedded in low melting point agarose (4%, Invitrogen) and 300 μm coronal vibratome sections were cut and transferred onto culture plate inserts (pore size 0.4 μm, Millipore) in culture medium without exogenous growth factors. After 2 hours in the incubator, DiI (Invitrogen) loaded glass beads were carefully delivered with a micropipette just ventral to the corpus callosum in the apical portion of the CA1. After 3 further days, the slices were fixed in PFA (4%) for 4 hours and immunostained. Photomicrographs were taken using an Axioplan 2 imaging microscope equipped with AxioVision software (Zeiss, Germany) and the distance from the external edge of the bead to the most distant DiI-labelled cell along the CA1 was calculated using ImageTool (UTHSCSA; University of Texas, USA) software. Arbitrary units were then converted to μm. For each genotype a minimum of 16 slices derived from at least six different animals were analysed.
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4

Measuring Axonal Growth and Regeneration in Drosophila

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To measure axonal outgrowth during development, flies were reared at 25°C and were dissected in fresh PBS. A minimum of 5 fly brains (10 sLNv projections) per genotype were fixed in 4% formaldehyde and stained with an anti-GFP antibody (Molecular Probes; 1:500), according to standard methods (Ayaz et al., 2008 (link)). For the axonal regrowth analysis after injury, flies were reared at 18°C (to minimize developmental effects), and shifted to 25°C 1 day prior to injury. Whole brain explants on culture plate inserts were prepared as described (Ayaz et al., 2008 (link); Koch and Hassan, 2012 (link)). In brief, culture plate inserts (Milipore) were coated with laminin and polylysine (BD Biosciences). Fly brains were carefully dissected out in a sterile Petri dish containing ice cold Schneider's Drosophila Medium (GIBCO), and transferred to one culture plate insert containing culture medium (10 000 U/ml penicillin, 10 mg/ml streptomycin, 10% Fetal Bovine Serum, and 10 μg/ml insulin in Schneider's Drosophila Medium (GIBCO). sLNv axonal injury was performed using an ultrasonic microchisel controlled by a powered device (Eppendorf) as described (Ayaz et al., 2008 (link); Koch and Hassan, 2012 (link)) and dishes were kept in a humidified incubator at 25°C. Four days later, cultured brains were fixed and immunohistochemical staining was performed as for freshly dissected samples.
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5

In Vitro Ovarian Follicle Culture

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Ovaries from day10 mice were placed on culture plate inserts (Millipore) and cultured in 400 μl of DMEM/F12 containing 0.1% BSA, 0.1% Albumax II, insulin-transferrin-selenium, 0.05mg/ml L-ascorbic acid and penicillin-streptomycin under a membrane insert to cover ovaries with a thin layer of medium. Ovaries were treated with 1–10 μM of MHY1485 and cultured for 4 days with medium change after 2 days of culture. Control ovaries were treated with solvent only. At the end of culture, ovaries were fixed with formalin before weighing. Some ovaries were paraffin-embedded and cut into continuous sections at 8 μm thickness. Sections were stained with hematoxylin and eosin for follicle counting, and in each section, only follicles with clearly stained oocyte nucleus were counted to avoid recounting of the same follicle.
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6

Culturing and Analyzing Primordial Follicles

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The ovary tissue of patients (n = 11) of non-ovarian factors containing primordial follicles were collected using excision surgery at the Department of Obstetrics and Gynecology in Shanghai Changzheng Hospital. All the participants are transsexual patients that had normal ovarian function and were not under hormonal treatment before the surgery. This study is approved by the Institutional Medical and Ethical Review Committee of Second Military Medical University. Clinical characteristics of cases were shown in Table 1. After being cut into 1 mm3 cubes, cortical tissues were placed on culture plate inserts (Millipore) and cultured in 400 μl of DMEM/F12 (Gibco) containing 10% human serum albumin (CSL Behring), 1% penicillin-streptomycin solution (HyClone), 0.3 IU/ml FSH, and 0.05 mg/ml L-ascorbic acid under a membrane insert to cover ovaries with a thin layer of medium. Ovaries were treated with 1–20 μM MHY1485 (10 mM in 1 ml DMSO, APExBIO, United States) and cultured for 3 h before immunoblotting analysis. Control ovaries were treated with solvent only. Other pairs of ovaries were cultured for 2 days with a medium change after 24 h of culture. Ovaries were fixed with formalin for histological analysis or prepared for transplantation before weighing.
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7

In Vitro Ovarian Culture and LPS Treatment

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For LPS treatment in vitro, ovaries from 10-day-old mice were placed on culture plate inserts (Millipore Corporation) and cultured in 400 µl of DMEM/F12 culture medium (Solarbio) supplemented with 10% FBS (Biological Industries) and 1% penicillin–streptomycin 100× solution (HyClone) in an incubator at 37 °C with 5% CO2 as previously reported69 (link). A thin layer of medium covered the ovaries on the inserts. Ovaries were treated with 10 µg ml−1 LPS with media changes every 2 d for 4 d. At the end of the culture, ovaries were fixed in Bouin’s solution, paraffin-embedded and cut into continuous sections before staining with H&E. The growing and primordial follicle percentages were analyzed in these sections as previously reported70 (link).
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8

In Vitro Ovary Explant Assay

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Ovaries were extracted and transferred individually to culture plate inserts (Millipore) and cultured in 400 μL Dulbecco's modified Eagle medium/F12 containing bovine serum albumin (Sigma-Aldrich), Albumax II (Invitrogen), insulin-transferrinselenium (Invitrogen), l-ascorbic acid and penicillinstreptomycin, which was an explant culture model described previously (Li et al. 2010 (link), Cheng et al. 2015) . The ovaries were randomly divided into several groups (n = 5/group) according to different concentrations (0, 3, 10, 30 or 100 μM) or exposure times (0, 1, 4, 8, 24 or 96 h) for incubation with Compound C (TOCRIS, Bristol, UK). The control ovaries (0 μM or 0 h) were treated with vehicle only. Ovaries were cultured for 4 days, with changes of medium after 2 days to allow for weight determination. The Compound C powder was dissolved in dimethyl sulfoxide (DMSO; Sigma-Aldrich) to create a 100-mM stock, followed by dilution with culture medium prior to use.
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