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Phycoerythrin pe

Manufactured by Miltenyi Biotec
Sourced in Germany

Phycoerythrin (PE) is a fluorescent protein derived from red algae. It is a light-harvesting pigment that plays a crucial role in the photosynthetic process. PE exhibits a bright orange-red fluorescence, making it a valuable label for various applications in flow cytometry and other fluorescence-based techniques.

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4 protocols using phycoerythrin pe

1

Flow Cytometric Analysis of Astrocytes

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MC and SC neonatal astrocytes from WT or SOD1G93A pups were detached by trypsin-EDTA and centrifuged for 5 min at 500× g. About 5 × 105 cells were resuspended and saturated for unspecific bonds by incubating with 0.5% bovine serum albumin (BSA) in phosphate-buffered saline (PBS, pH 7.4) for 15 min at RT. Aliquots of the suspension were stained (1 h at RT) with the following fluorochrome-conjugated antibodies for flow cytometry: mouse monoclonal anti-GFAP antibody conjugated with Alexa Fluor A488 (Thermo Fisher Scientific, Cat# 53-9892-82), rat monoclonal anti-ACSA2 antibody conjugated with phycoerythrin (PE) (Miltenyi Biotec, Cat# 130-102-365) and rat monoclonal anti-TMEM119 antibody conjugated with Alexa Fluor A488 (Abcam, Cat# ab225497). For GFAP staining, cell suspensions were previously fixed and permeabilized, 20 min at 4 °C, by using the Cytofix/Cytoperm Fixation/Permeabilization Kit (BD Bioscience, Cat# 554714). After staining, cells were centrifuged (5 min at 500× g) and pellets were resuspended in PBS for flow cytometry analyses. Cell debris and dead cells were excluded from analysis by 7-aminoactinomycin D (7-AAD) labeling. Data were acquired on a Guava easyCyte 6 flow cytometer (Merck Millipore, Burlington, MA, USA) and processed using the GuavaSoft 3.1.1 software (Merck Millipore).
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2

Comprehensive Cytometric Analysis of Stem Cell Populations

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Cell cycle distribution by PI staining and apoptosis by AnnexinV-FITC (BD biosciences, San Diego, CA, USA)/PI staining were performed as previously described [62 ]. For analysis of CD133+ subpopulation, the cells were washed with PBS, and then incubated with antibody against CD133/1 conjugated with phycoerythrin (PE; MiltenyiBiotec, BergischGladbach, Germany) on ice in the dark for 20 min. After the cells had been washed with PBS, the CD133+ and CD133 populations were analyzed by FACS. Active caspase-3 Apoptosis Kit (BD biosciences) was used to detect the heterodimer of 17 and 12 kDa subunits, which is derived from the pro-enzyme. For annexinV and caspase-3 double staining, cells were washed with 1× binding buffer and then incubated with FITC annexinV (BD biosciences) for 15 min at room temperature in the dark. After annexinV staining, caspase-3-PE staining was performed on the same cells following manufacturer instructions. ALDH activity was evaluated by ALDEFLUOR kit (ALDH, STEMCELL Tecnologies, Vancouver, BC, Canada) following manufacturer instructions. All flow cytometric analyses were performed by using BD Accuri™ C6 flow cytometer (BD biosciences).
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3

Immunophenotyping of Tumor Infiltrates

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Tumors were embedded and frozen. Fixed cryostat sections were incubated with anti-human CD3 antibody conjugated with Phycoerythrin (PE) (Miltenyi Biotec), anti-human CD45 antibody conjugated with PE (Miltenyi Biotec), anti-human CD56 antibody conjugated with PE (Miltenyi Biotec), and/or unconjugated anti-human PD-L1 antibody. After washing, slides were probed with Alexa Fluor 488 dye–conjugated secondary antibodies (Thermo Fisher Scientific), whenever indicated, mounted with ProLong Diamond Antifade Mountant (Thermo Fisher Scientific), and the signals were examined using an Eclipse Ti-E fluorescence microscope (Nikon, Tokyo, Japan).
To confirm successful transduction of CAR in NK92 cells, nontransduced WT NK92 and CAR NK92 cells (1 × 104 cells in 100 μl of PBS) were seeded onto a microscopic slide by cytocentrifugation at 500 rpm for 5 min using Shandon Cytospin centrifuge (Shandon Scientific Ltd., UK). The cells were then air-dried, fixed with 4% paraformaldehyde for 15 min, and mounted with ProLong Diamond Antifade Mountant. GFP signal in the cells was examined using an Eclipse Ti-E fluorescence microscope.
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4

Characterizing CAR T-cell Expression

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Flow cytometry was performed using antibodies specific to human TCRa/b, CD19, PD-L1 and CD45 (BioLegend, San Diego, CA, USA). CAR was detected using a two-step process with a CD19 CAR detection reagent labeled with biotin and an anti-biotin antibody conjugated with phycoerythrin (PE; Miltenyi Biotec, Bergisch Gladbach, Germany). Cells were washed with FACS buffer (phosphate-buffered saline [PBS] containing 2% fetal bovine serum and ethylenediaminetetraacetic acid), incubated with antibodies for 30 minutes at 4°C, and washed twice with FACS buffer before analysis. Blood, bone marrow, and spleen samples from mice were treated with ammonium chloride solution (STEMCELL Technologies) for red blood cell lysis, washed twice, and incubated with TruStain FcX antimouse CD16/32 (BioLegend) for 10 min at 4°C before staining to detect CD45 and CAR expression. Samples were analyzed using a BD LSRFortessa X-20 instrument (BD Biosciences, San Diego, CA, USA), and flow cytometry data were analyzed using FlowJo flow cytometry analysis software v.10 (BD Biosciences).
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