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10 protocols using almond β glucosidase

1

Preparation of Oleuropein and Hydroxytyrosol

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Oleuropein was purchased from Extrasynthese (Genay, France) and deglycosilated by treatment with almond β-glucosidase (EC 3.2.1.21, Sigma-Aldrich, St. Louis, Germany), as previously described [59 (link)]. Stocks of OleA (50 mM) were kept frozen and protected from light and were used within the same day once opened.
HT was purchased from Merck–Sigma-Aldrich (Milano, Italy). The powder was dissolved in an aqueous solution at 100 mM final concentration and stored at −20 °C, as previously reported [60 (link)].
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2

Extraction and Analysis of Vicine and Convicine

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The extraction of vicine, convicine and their aglycones was performed with the method proposed by Marquardt and Fröhlich19 with some modifications. Fifty milliliters of perchloric acid (5% wt/vol) were added to 5 g of the faba bean flour doughs. Samples were homogenized for 5 min at 4 °C. The extract was centrifuged and filtered through a 0.45 μm filter (Millipore Co., Bedford, MA) to remove suspended material before the analyses based on LC coupled to mass spectrometry (MS). For hemolysis determination the extracts were freeze-dried to remove the solvent.
The set-up of the LC-MS method could be applied experimentally only for vicine (purchased from Sigma), due to the lack of a commercial convicine standard. In particular, 1 mL of a 1 mM solution of vicine prepared in 50 mM phosphate buffer at pH 5, preliminarily flushed with nitrogen for 10 min, was subjected to enzymatic hydrolysis by adding 5 mg of almond β-glucosidase (Sigma) and incubating at room temperature, in accordance with the experimental conditions reported by Pedersen, Musci and Rotilio33 (link). Aliquots of the mixture, resulting from flour extracts after enzymatic hydrolysis of the vicine/convicine (E-Ct) were withdrawn, at 30 min intervals, over a 2 h time of incubation and analyzed by the LC-ESI-MS method described below.
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3

Antioxidant Activity Assay Protocol

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Sodium hypochlorite solution, diammonium salt of ABTS (2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid)), almond β-glucosidase, ascorbic acid, caffeic acid, catechin, quercetin, Trolox, ethanol, acetonitrile, formic acid, acetone (HPLC grade), methanol (MS grade), deuterated trifluoroacetic acid, and D2O were obtained from Sigma Chemical Co. (St. Louis, MO, USA). HCSe and HCS probes were synthesized in the Department of Applied Chemistry, National Chiao Tung University, Hsinchu, Taiwan, ROC according to previously published methods [19 (link),20 (link)]. BRE was obtained from FutureCeuticals, Inc. (Momence, IL, USA) [17 (link)].
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4

Oleuropein Deglycosylation and Mixtures

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Oleuropein (Extrasynthese, France) was deglycosilated by treatment with almond β-glucosidase (EC 3.2.1.21, Sigma-Aldrich, St. Louis, Germany), as previously described [42 (link)]. Briefly, a 10 mM solution of Oleuropein in 310 μL of 0.1 M sodium phosphate buffer, pH 7.0, was incubated with 8.9 I.U. of β-glucosidase overnight at room temperature. Then, the reaction mixture was centrifuged at 18,000× g for 10 min to precipitate the aglycone (OleA) and the precipitate was resuspended in DMSO in 100 mM stocks. Complete Oleuropein deglycosylation to OleA was confirmed by assaying the glucose released in the supernatant with the Glucose (HK) Assay kit (Sigma-Aldrich, Germany). Stocks of OleA were kept frozen and protected from light and were used within the same day once opened.
HT was purchased from Sigma-Aldrich. The powder was dissolved in an aqueous solution at 100 mM final concentration and stored at −20 °C, as previously reported [43 (link)]. For experiments, OleA and HT were mixed (MIX) at different OleA:HT molar ratios maintaining the same overall concentration of 75 μM: 2:1 (50 μM:25 μM), 1:1 (37.5 μM:37.5 μM) and 1:2 (25 μM:50 μM).
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5

Quantifying PPT1 Activity via Fluorescence

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The quantification assay of PPT1 activity was performed as previously described.65 (link) Specifically, palmitate linked to 4-methylumbelliferyl-6-thio-βd-gluco-pyranoside (MU-6S-Palm-βGlc, MedBio) was selected as a substrate. PPT1 cleaved the thioester bond and then released the intermediate 4-methylumbelliferyl-6thio-β-d-gluco-pyranoside and palmitate. The intermediate was further hydrolyzed by exogenous almond β-glucosidase (Sigma) to 4-methylumbelliferone, the fluorescence of which was measured to quantify PPT1 cleavage of palmitate groups.
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6

Evaluating PPT1 Activity in HepG2 Cells

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HepG2 cell line was treated with GNS561 (1, 5 and 10 µM), HCQ (50, 100 and 200 µM) and HDSF (25 and 100 µM) for 3 h. The cells were lysed in 0.5% Triton X-100 with cOmplete™ Protease Inhibitor Cocktail. The cell lysates were used a source of PPT1 and PPT1 activity was assayed using 4-methylumbelliferyl-β-D-6-thiopalmitoyl-glucoside as reported [37 (link)]. Reaction mixtures contained 5 µL of cell lysate + 5 µL 0.5% Triton X-100 with cOmplete™ Protease Inhibitor Cocktail + 20 μL of substrate preparation (0.5 mM substrate, 1.5 mM dithiothreitol, 0.1 U almond β-glucosidase (Sigma-Aldrich, G4511), 0.2% Triton X-100 and McIlvain’s phosphate citrate buffer (0.2 M Na2HPO4, 0.1 M citric acid, pH 4). After 1 h incubation at 37°C, the reaction was stopped by adding 200 µl of 0.5 M glycine-NaOH, pH 10.5 buffer. The amount of the released fluorescent product 4-methylumbelliferone was determined by fluorometry at 358 and 448 nm for the excitation and emission wavelengths, respectively. Infantile subtype of ceroid lipofuscinosis fibroblasts which contain PPT1 mutations and normal fibroblasts were used as control. 4-methylumbelliferone diluted in 0.5 M glycine-NaOH, pH 10.5 buffer was used to do a standard curve and to calculate the enzymatic activity of PPT1.
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7

Regenerated Amorphous Cellulose Preparation

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Regenerated amorphous cellulose (RAC) was prepared from Avicel PH-101 as previously described (Zhang and Lynd 2004 (link); Frommhagen et al. 2015 (link)). d-Glucose, d-gluconic acid, ascorbic acid, and 3-methylcatechol were purchased from Sigma-Aldrich (Steinheim, Germany). d-Cellobionic acid ammonium salt was obtained from Toronto Research Chemicals (Toronto, Ontario, Canada). Almond β-glucosidase was purchased from Sigma-Aldrich and had, according to the supplier’s information, a specific activity of 6 U mg−1 lyophilized powder. Commercial cellulase mixtures Celluclast 1.5 L and Novozym 188 were obtained from Novozymes A/S (Bagsværd, Denmark).
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8

Synthesis of Iridoid Pathway Compounds

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The substrates 8-carboxygeranial, 8-carboxygeranic acid, 8-oxogeranic acid and 8-hydroxygeranic acid were synthesized on order by Synthelor (Vandoeuvre-Lès-Nancy, France), whereas 8-OH-geraniol, 8-oxogeraniol, 8-OH-geranial and 8-oxogeranial were synthesized by Chiralix B.V. (Nijmegen, Netherlands). Iridodial-glucoside, iridotrial-glucoside and 7-deoxyloganic acid were synthesized from aucubin extracted from Aucuba japonica leaves by Chiralix B.V. as described29 30 . The aglucone iridoid pathway intermediates were produced by incubation with almond β-glucosidase (Sigma-Aldrich) in 50 mM acetate buffer (pH 5). Loganetic acid and loganetin were produced by the deglucosylation of loganic acid and loganin (Extrasynthese). Aglycones were extracted with diethyl ether, evaporated under N2 and quantified by 1H-NMR (1H-nuclear magnetic resonance).
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9

Analytical Reagents for Protein Analysis

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Formic acid, LC–MS grade methanol,
and acetonitrile as well as cysteine, cysteamine, N-acetylcysteine, DL-dithiothreitol, the diammonium salt of ABTS (2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic
acid)), and almond β-glucosidase were obtained
from Sigma Chemical Co. (St. Louis, MO). Water purified through a
Milli-Q (Millipore) water system (ISO 9001) was used for all solution
preparations and dilutions.
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10

Quantification of Lignan Glycosides

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Lignan quantification was performed as previously reported [20 (link), 24 (link)]. In brief, the suspension cells were cultured for 14 days, and frozen in liquid (LN2) nitrogen and lyophilized followed by extraction by 80% methanol at 4°C and evaporation in vacuo. The residue was dissolved in water, and the remaining aqueous phase, containing the lignan glycoside, was digested at 40°C overnight with 6 units/ml almond β-glucosidase (Sigma) in 0.15 M sodium acetate buffer (pH 5.2). The resulting samples were adjusted with 50% acetonitrile and then centrifuged at 15,000 rpm for 5 min. The supernatant was filtered through a Millex-LH filter (0.45 μm 4 mm-1; Millipore) and then subjected to analysis by reverse-phase high performance liquid chromatography (HPLC) using a Develosil C30-UG-5 column (4.6 × 150 mm, Nomura Chemical, Aichi, Japan). Each sample was eluted with a linear gradient of 35–90% solvent B [90% acetonitrile containing 0.1% (v/v) trifluoroacetic acid] in solvent A [H2O containing 0.1% (v/v) trifluoroacetic acid] for 20 min at a flow rate of 0.6 ml min-1 and then was eluted with 90% solvent B for 7 min. Lignans were monitored by UV absorption at 280 nm, and identified by both retention time and mass spectrum comparison with standard compounds [20 (link)].
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