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3 protocols using ml216

1

Culturing Prostate Cancer Cell Lines

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The RWPE-1, LNCaP, 22RV1, PC3, and DU145 cell lines were obtained from Zhong Qiao Xin Zhou Biotechnology Co., Ltd. (Shanghai, China). HEK-293T cells were purchased from Kunming Cell Bank (Kunming, China). The cells were cultured and aliquots were stored in liquid nitrogen for future use. RWPE-1 cells were cultured in customized medium (ZQXZ Bio, Shanghai, China). LNCaP, 22RV1, and DU145 cells were cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum (FBS) and 1% penicillin–streptomycin (P/S) at 37 °C in a 5% CO2 environment. PC3 cells were cultured in ATCC-formulated F-12K medium supplemented with 10% FBS and 1% P/S at 37 °C in a 5% CO2 environment. HEK-293T cells were cultured in DMEM/HIGH GLUCOSE (HyClone, Logan, Utah, USA) supplemented with 10% FBS and 1% P/S at 37 °C in a 5% CO2 environment. Olaparib (AZD2281) and ML216 (CID-49852229) were purchased from MedChemExpress (Monmouth Junction, NJ, USA).
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3D Outgrowth and Bioluminescence Imaging

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3D-outgrowth quantification and in vivo bioluminescence imaging were carried out as described (Gooding et al, 2017 (link)). Cells were cultured in appropriate media supplemented with 5% Cultrex, as well as 5-FdU or 5-fluorouracil (5-FU; Sigma-Aldrich), the ATR inhibitors AZ20 (4-{4-[(3R)-3-Methylmorpholin-4-yl]-6-[1-(methylsulfonyl)cyclopropyl]pyrimidin-2-yl}-1H-indole; MedChem Express) or VE-821 (3-amino-6-[4-(methlsulfonyl)phenyl]-N-phenyl-2-pyrazinecarboxamide; Sigma-Aldrich), the BLM inhibitor ML216 (1-(4-fluoro-3-(trifluoromethyl)phenyl)-3-(5-(pyridine-4-yl)-1,3,4-thiadiazol-2-yl)urea; MedChem Express), or the telomerase inhibitor BIBR1532 (Selleckchem) as indicated. For U2OS cells, Cultrex cushions were supplemented with type I collagen (3 mg/ml; BD Biosciences). In mice, 5-FdU and 5-FU were administered by slow intravenous injection (0.1 ml at a rate of 0.4 ml/min). Mice were randomly assigned to receive cell lines or treatments. Endpoints for 3D-outgrowth and pulmonary tumor assays were determined prospectively. Growth was normalized to an initial reading taken 24 h post-plating (in vitro) or immediately after inoculation (in vivo).
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3

DNA Damage Response Signaling Pathway

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Roswell Park Memorial Institute (RPMI) 1,640 culture medium was purchased from HyClone (Logan, UT, USA). Fetal bovine serum (FBS) was purchased from Gibco (Grand Island, NY, USA). Olaparib (AZD2281, Ku-0059436) was purchased from Selleck (Houston, TX, USA). ML216 (CID-49852229) was purchased from MedChemExpress (Monmouth Junction, NJ, USA). Antibodies against pBRCA1 (Ser1524), p53BP1 (Ser1778), pATM (Ser1981), pATR (Ser428), Rad50, Mre11, pDNA-PKcs (Ser2056), Ku80, pChk2 (Thr68), pChk1 (Ser317), pRb (Ser807/811), pRb (Ser795), p21, and γH2AX were purchased from Cell Signaling Technology (Danvers, MA, USA). Antibodies against RPA70, Rad51, 53BP1, CyclinA, and Ki-67 were purchased from Abcam (Cambridge, UK). Antibodies against β-tubulin, β-actin, and glyceraldehyde 3-phosphate dehydrogenase were purchased from Proteintech (Rosemont, IL, USA).
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