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3 protocols using cd90.2 apc cy7

1

Flow Cytometry Antibody Panel

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The following antibodies were used in flow cytometry: B220 FITC 1:50 (BD Pharmingen, RA3-6B2), CD3 BV421 1:200 (17A2, BioLegend), CD3 FITC 1:50 (17A2, BD Pharmingen), CD3 PE-Cy-7 1:25 (145-2C11, BD Pharmingen), CD11b PerCP-Cy5.5 1:400 (M1/70, eBioscience), CD11b BV421 1:400 (M1/70, BioLegend), CD11b PE-Cy-7 1:400 (M1/70, eBioscience), CD11c BV421 1:100 (N418, BioLegend), CD16/32 unconjugated 10 μg ml−1 (93, BioLegend), CD19 BV421 (6D5, BioLegend), CD19 APC 1:400 (1D3, BD Pharmingen), CD45 BV421 1:400 (30-F11, BioLegend), CD45 BV785 1:400 (30-F11, BioLegend), CD49b APC 1:100 (DX5, BD Pharmingen), CD90.2 APC-Cy7 1:400 (30-H12, BioLegend), CD117 PE 1:800 (2B8, eBioscience), CD117 APC 1:800 (2B8, BD Pharmingen), CD117 BV711 1:800 (2B8, BioLegend), FcεRI APC 1:200 (MAR-1, eBioscience), Gr-1 BV421 1:800 (RB6-8C5, BioLegend), Gr-1 BV605 1:200 (RB6-8C5, BioLegend), IgE PE 1:100 (RME1, BioLegend), IgE BV786 1:100 (RME-1, BD Pharmingen), IgE BV421 1:100 (RME-1, BD Pharmingen), Ly6G PerCP-Cy5.5 1:100 (1A8, BD Pharmingen), MHCII A700 1:100 (M5/114.15.2, eBioscience), Siglec-F BV421 1:100 (E50-2440, BD Pharmingen), Siglec-F PE 1:100 (E50-2440, BD Pharmingen), Ter119 BV421 1:200 (Ter119, BioLegend), 5-HT unconjugated 0.11 μg ml−1 (5HT-H209, Dako) and mouse-IgG1 PE 1:100 (RMG1-1, BioLegend).
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2

Multicolor FACS Analysis of B Cell Subsets

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Cells were resuspended at a concentration of 106 cells/100 μl fluorescence-activated cell sorting (FACS) buffer (1X PBS, 2 mM EDTA, 1% BSA). Cells were stained with Fc block (BD Biosciences) for fifteen minutes, stained with antibody-fluorophores for one hour on ice, then washed with ten volumes of FACS buffer. The following antibodies were used: B220-PE-Cy7 (RA3–6B2, Tonbo), CD11b-APC-Cy7 (M1/70, Tonbo), CD45.1-FITC (A20, Tonbo), CD45.2-PerCP-Cy5.5 (104, Tonbo), CD90.2-APC-Cy7 (30-H12, BioLegend), F4/80-APC-Cy7 (BM8, BioLegend), CD138-BV711 (281–2, BD), CD21-APC (B-ly4, BD), CD43-PE (S7, BD), GL7-eFluor660 (GL-7, eBioscience), CD23-eFluor450 (B3B4, eBioscience), IgM-FITC (II/41, eBioscience), Annexin V-APC (kit number 88–8007-72, eBioscience), and Zombie Yellow Fixable Viability Dye (kit number 423104, BioLegend). An LSRII was used for analysis and an ARIAII was used for sorting (BD Biosciences). All flow cytometry data was analyzed with FlowJo version 9.9.5. Preceding all flow cytometry analyses presented is the following gating strategy: 1) lymphocytes (forward scatter [FSC]-area by side scatter [SSC]-area), 2) singlets (FSC-width by FSC-height), 3) singlets (SSC-width by SSC-height), 4) live cells (viability dye), 5) exclusion of non-B cell lineage cells (Thy1.1F4/80CD11b).
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3

Multiparametric Flow Cytometry Analysis of Lung and Bone Marrow Cell Populations

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Single cell suspensions from freshly digested lung tissue or BM were prepared as described above and analyzed by flow cytometry as described previously [37] . Dead cells were excluded from analysis using the Fixable Viability Dye eFluor™ 506 (#65-0866; dilution 1:1000; eBioscience, San Diego, CA, USA). Combinations of the following antibodies (and fluorophores) were used: anti-mouse ST2-PE-Cy7 (#25-9335-80, clone: RMST2-2; dilution 1:100; eBioscience), IL-13-Alexa Fluor 488 (#53-7133-82, clone: eBio13A; 1:100; eBioscience), ICOS-BV421 (#564070, clone: 7E.17G9; 1:100; BD Biosciences, San José, CA, USA), Lineage-APC cocktail of anti-CD3e, CD11b, B220, TER-119, Ly-6C, Ly-6G (#558074; 1:5; BD Biosciences), CD90.2-APC-Cy7 (#105732, clone: 30-H12; 1:100; Biolegend, San Diego, CA, USA), CD45-Pacific Blue (#103126, clone: 30-F11; 1:200; Biolegend), along with their respective isotype controls. The data were acquired using a NovoCyte flow cytometer and analyzed by NovoExpress software (Aeca Biosciences, Inc, San Diego, CA, USA). All other fluorescence conjugated-antibody controls except the target antibody were used for compensation.
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