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Hoechst h33258

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Hoechst H33258 is a fluorescent dye used for staining DNA in biological samples. It functions as a minor groove binder, selectively binding to adenine-thymine-rich regions of DNA. This property allows Hoechst H33258 to be utilized for a variety of applications, such as cell counting, cell cycle analysis, and fluorescence microscopy.

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7 protocols using hoechst h33258

1

Analyzing Phosphorylated Signaling Proteins

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Antibodies against phosphorylated p38, phosphorylated MKK3/6, MKK6, and MKK3b were from Cell Signaling Technology (Beverly, MA, USA). Antibodies against p38, HA, GFP, and Actin were from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibody against RACK1 was from BD Biosciences (Franklin Lakes, NJ, USA). Glutathione-Sepharose beads, Protein A-Sepharose beads, Hanks’ balanced salt solution (HBSS), collagenase I, PI, hoechst (H33258), cycloheximide, and antibody against FLAG were from Sigma-Aldrich (St. Louis, MO, USA). p38 inhibitors SB203580 and SB239063 were from CalBiochem (San Diego, CA, USA). ECL chemiluminescence kit was from Amersham (Arlington Heights, IL, USA). In vitro protein translation system was from Promega (Madison, WI, USA).
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2

Quantification of DNA Damage in ISAE-Treated Jurkat Cells

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Jurkat cells were treated with ISAE at the indicated concentrations for 24 h. Cells were then collected, washed with ice-cold PBS twice, and fixed in 4% paraformaldehyde for 20 min at 25 °C. Fixed cells were washed and resuspended in deionized water, and then a 10 µL cell suspension containing 5 × 104 cells was spread on a microscope slide. Cell spreads were allowed to dry at room temperature for 30 min. The dried cell slides were used for the immuno-fluorescence assay. The slides were washed with washing buffer (0.1% BSA in PBS) and blocked with blocking buffer (5% BSA, 0.3% Triton X-100 in PBS) for 1 h at 25 °C. The slides were allowed to react with primary antibody (anti-p-H2A.X) at 4°C overnight, and then with tetramethyl rhodamine isothiocyanate-conjugated anti-mouse IgG antibody as secondary antibody for 1 h at room temperature. DNA was stained with Hoechst H33258 (Sigma-Aldrich) to localize the cell nuclei. Images of the nuclei and p-H2A.X were acquired and analyzed automatically using an HCS instrument (ImageXpress Micro System, Molecular Devices, Sunnyvale, CA, USA).
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3

Antioxidant Evaluation of Fatty Acids

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Dulbecco’s Modified Eagle’s Medium (DMEM), heat-inactivated fetal bovine serum (FBS), and H2DCF-DA were purchased from Thermo scientific (Madison, WI, USA). Resazurin was purchased from Cayman Chemical (Ann Arbor, MI, USA). EPIXTRACT Nuclear Protein Isolation Kit (ENZ-45016) was purchased from Enzo Life Sciences (Hines Dr, Ann Arbor, MI, USA). Hoechst H33258 was purchased from Sigma-Aldrich (Burlington, MA, USA). α-Linolenic acid (ALA) and γ-linolenic acid (GLA) were purchased from ChemScene LLC (Monmouth Junction, NJ, USA). All other chemicals and reagents used were of analytical grade.
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4

Quantifying Endometrial Cell DNA

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The DNA content of cultured endometrial cells was measured as described previously (Labarca & Paigen, 1980). Briefly, after cell disruption with an ultrasonic homogenizer, the cell lysates were incubated with Hoechst H 33258 (Sigma‐Aldrich). After incubation for 10 min, the fluorescence of each sample and standard was measured with a microplate fluorometer (Fluoroskan Ascent, Labsystems, Thermo Fisher Scientific). The standard curve ranged from 0.625 to 30 µg/ml, and the ED50 of the assay was 10 µg/ml.
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5

Superparamagnetic Iron Oxide Nanoparticles in A549 Cells

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The superparamagnetic γ-Fe2O3 NPs utilized in this study were prepared from magnetite (Fe3O4) according to the methods proposed elsewhere [36 (link), 37 (link)]. The human lung alveolar carcinoma epithelial cells (A549) were obtained from the Shanghai Cell Bank of the Chinese Academy of Sciences (Shanghai, China). The cell culture medium and fetal bovine serum (FBS) were purchased from Gibco Invitrogen Corporation (CA, USA). PLL (Mw = 338,100), 3-(4,5-dimethylthiazol-2-diphenyl-tetrazolium) bromide (MTT), potassium ferrocyanide (Perls reagent), FDA, PI, RNase, Hoechst H33258, dimethyl sulfoxide (DMSO), Triton X-100 solution, glutaraldehyde, and paraformaldehyde were purchased from Sigma-Aldrich (St. Louis, MO, USA). Neutral red was obtained from Beyotime Biotech (Jiangsu, China). Fluorescent dye 4,6-diamidino-2-phenylindole (DAPI) was purchased from Molecular Probes Inc. (Eugene, OR, USA). Rhodamine phalloidin was obtained from Cytoskeleton Inc. (Denver, CO, USA). Other reagents and chemicals were purchased from local commercial suppliers and were of analytical reagent grade, unless otherwise stated. Deionized water (Milli-Q, Millipore, Bedford, MA, USA) was used to prepare aqueous solutions.
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6

GNMT Subcellular Localization Assay

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Cultured HEK 293T cells, transfected with plasmids encoding wild type [WT]-GNMT, GNMT serine 9 mutant (GNMTS9A) or GNMT threonine 7 mutant (GNMTT7A), were placed on cover slides, treated with 10 μM BaP or 0.1% DMSO, fixed with solution I (4% paraformaldehyde and 400 mM sucrose in PBS) at 37 °C for 30 min, fixed with solution II (fixing solution I plus 0.5% Triton X-100) at room temperature for 15 min, and fixed with blocking buffer (0.5% BSA in PBS) at room temperature for 1 h. After washing with PBS, the slides were allowed to react with various primary antibodies at 4 °C overnight. Rabbit anti-GNMT antiserum-R54 (1:200 dilution), FITC-conjugated and Rhodamine-conjugated anti-rabbit IgG were used as secondary antibodies. After four rinses with PBS, slides were mounted and observed using a confocal fluorescence microscope (TCS-NT, Hilden, Germany). DNA was stained with Hoechst H33258 (Sigma–Aldrich) to localize cell nuclei.
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7

Immunofluorescent Staining of VE-Cadherin and Claudin-5

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A protocol similar to that of phalloidin labeling was used, but 0.1% Triton-X 100 was prolonged to 8 minutes. This was followed by 0.1M phosphate buffer wash (45mins), 10% donkey serum (1 hour), and a goat anti-VE-cadherin primary antibody (1:50, 1 hour; sc-6458, Santa Cruz Biotechnology, Santa Cruz, CA) or a rabbit anti-claudin-5 primary antibody (1:50, 1hour; SAB4200538, Sigma-Aldrich, St. Louis, MO). This was followed by a 0.1M PB wash (45 minutes), and then secondary antibodies with Hoechst (H 33258, 1:1000, Sigma-Aldrich, St. Louis, MO) in 0.1M PB was perfused (1 hour) before the final wash with 0.1 M PB (45 minutes). Secondary antibodies used in this study were donkey anti-goat IgG
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