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7 protocols using mab1637

1

Immunocytochemical Analysis of Pluripotency and Lineage Markers

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For immunocytochemistry, cells were fixed with 4% paraformaldehyde for 20 min at 4 °C. After washing with PBS, the cells were treated with 0.3% Triton X-100 in PBS for 10 min and blocked with PBS containing 3% bovine serum albumin (Bovogen, BSAS0.1) for 1 h at 25 °C. The cells were then treated with primary antibodies at the following concentrations: OCT4 (1:500, Santa Cruz Biotechnology, Dallas, TX, USA, SC-5279), NANOG (1:500, Abcam, Cambridge, UK, ab80892), EOMES (1:500, Abcam, ab23345), GATA4 (1:200, Abcam, ab84593), tubulin beta III isoform (TUJ1; 1:500, Millipore, Burlington, MA, USA, MAB1637), smooth muscle actin (SMA; 1:500, Abcam, ab7817), SOX17 (1:500, R&D Systems, AF1924), and CDX2 (1:1250, Abcam, ab76541). The following day, the primary antibodies were removed and the cells washed thrice with PBS for 10 min. Finally, the cells were labeled with fluorescence-conjugated secondary antibodies to detect the primary antibodies at the following concentrations: Alexa Fluor 488 (1:500) and Alexa Fluor 568 (1:500). Lastly, they were treated with DAPI or Hoechst in 0.3% Triton X-100 in PBS for 3 min at room temperature and washed.
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2

Immunocytochemistry Protocol for Stem Cell Markers

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For immunocytochemistry, cells were fixed with 4% paraformaldehyde for 20 min at room temperature. After cells were washed with PBS, they were treated with PBS containing 10% normal goat serum and 0.03% Triton X-100 for 45 min at room temperature. The primary antibodies used were anti-Oct4 (Oct4; monoclonal, 1:100, Abcam, sc-9081), anti-nanog (nanog; monoclonal, 1:200, Abcam, ab80892), anti-Sox2 (Sox2; polyclonal, 1:500, Millipore, AB5603), anti-tubulin, beta III (Tuj1; monoclonal, 1:1000, Millipore, MAB1637), anti-SMA (SMA; monoclonal, 1:200, Abcam, ab7817), and Sox17 (Sox17; polyclonal, 1:200, R&D systems, AF1924). For the detection of primary antibodies, fluorescence-labeled secondary antibodies (Alexa fluor 488 or 568; Molecular Probes, Eugene, OR, USA) were used according to the specifications of the manufacturer.
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3

Quantification of Neuronal Markers in Hippocampal and Striatal Cultures

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Polyclonal rabbit chromogranin B (1:500; SySy 25103), monoclonal mouse β3‐tubulin (1:500; Millipore MAB1637), polyclonal chicken MAP2 (1:10,000; Abcam ab5392), monoclonal mouse GFAP (1:1,000; Sigma G3893), monoclonal mouse SMI‐312 (1:5,000; Covance), polyclonal guinea pig VGLUT1 (1:1,000; Millipore AB5905), polyclonal rabbit VGAT (1:500; SySy 131002), and polyclonal rabbit Synapsin I&II (1:1,000; E028).
Alexa Fluor conjugated secondary antibodies were from Invitrogen (1:1,000). Coverslips were washed again and mounted with Mowiol 4‐88 (Sigma, 81381) and examined on a confocal microscope [Nikon A1R with LU4A laser unit or Zeiss LSM 510 confocal microscope using a 40× oil immersion objective (NA = 1.3)]. Z‐stacks (5 steps of 0.5 μm) were acquired, and resulting maximum projection images were used for analysis. A 60× oil immersion objective (NA = 1.4) was used for detailed zooms. To count the number of VGLUT1+ or VGAT1+ neurons in hippocampal or striatal cultures, coverslips were scanned to ensure every neuron was captured. Confocal settings were kept constant for all scans within an experiment.
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4

Immunocytochemistry of Neural Cell Markers

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Cultures were fixed in 10% buffered Formalin (Protocol 23–305-510) for 10 minutes, permeabilized in PBS + 0.2% (v/v) Triton X-100, blocked in PBS + 1% BSA, 0.1% Tween-20 for 30 minutes, and incubated with primary antibodies for 2 hours. Cultures were washed twice with blocking solution and incubated 1 hour with secondary antibodies. 4’,6-diamidino-2-phenylindole (DAPI) was added for five minutes before final washing in PBS-T. Antibodies: STEM121 (Takara; Y40410; 1:500), βIII Tubulin (Millipore; MAB1637; 1:500), NeuN (Abcam; ab177487; 1:1000), Sox10 (R&D Systems; AF2864-SP; 1:100). Appropriate secondary antibodies were purchased from ThermoFisher Scientific and used at 1:500 dilution.
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5

Multiplex Immunofluorescence Staining

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Cells were fixed for 20 min at room temperature with 4% paraformaldehyde, washed with PBS, and blocked for 45 min at room temperature with PBS containing 10% normal goat serum and 0.03% Triton X-100. Cells were then probed with primary antibodies against Oct4 (Oct4; monoclonal, 1:100, Abcam sc-9081), Nanog (Nanog; monoclonal, 1:200, Abcam ab80892), tubulin beta III (Tuj1; monoclonal, 1:1000, Millipore MAB1637), SMA (SMA; monoclonal, 1:200, Abcam ab7817), and Sox17 (Sox17; polyclonal, 1:200, R&D systems AF1924). Finally, cells were labeled with secondary antibodies conjugated to Alexa Fluor 488 or 568 (Molecular Probes, Eugene, OR, USA), following specifications of the manufacturer.
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6

Immunocytochemical Characterization of Neuronal Cells

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The NPCs and neurons grown on cover slips were fixed in 4% paraformaldehyde in 1x PBS for 1 hr at 4°C and washed twice with 1x PBS. The fixed cells were incubated in 0.3% Triton X 100 for 30 min to 1 hr, and treated with 50 mM NH4Cl in 1x PBS for 15 min followed by a 1x PBS wash. The cells were blocked for 1 hr at RT in blocking buffer (5% goat serum and 0.4% Triton X 100 in PBS). Primary antibodies diluted in the Blocking buffer were applied to the cells and incubated overnight at 4°C. After PBS washing (3x 10 min), the secondary antibodies, goat anti-mouse or/and goat anti rabbit conjugated with Alexa Fluor 488 or Alexa Fluor 633 (1: 1500) in blocking buffer were applied and incubated for 1 hr at RT. Following 1x PBS washes (3x 10 min), the cells were mounted with VECTASHIELD mounting medium containing DAPI (Vector H1200). The signals were observed under Zeiss Apotome fluorescence microscope. The antibodies used: rabbit anti-nestin (1:125; Millipore, AB5922), rabbit anti-sox2 (1: 100; Millipore, AB5603), rabbit anti-Map2 (1:200; Millipore, AB5622), mouse anti-α-synuclein (1:10; Invitrogen, 18-0215), mouse anti-synaptophysin (1:100; Millipore, MAB5258), rabbit anti-Tyrosine hydroxylase (1:100; Chemicon, AB152), mouse anti-Tuj1 (1:100; Millipore, MAB1637), mouse anti-Lamp1 conjugated with Cy5 (1:100; Abcam, ab25222), and rabbit anti-human GCase (1:100) [45 (link)].
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7

Immunocytochemistry for Neural Cell Markers

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Cells were washed three times with sterile PBS and then fixed using 4% PFA for 20 min. After washing, cells were blocked 0.3% Triton-X and 1% goat serum in PBS for 1 h. Primary antibodies specific for Synapsin1 (1:500; ab254349; Rabbit; Abcam, Cambridge, MA, USA), NeuN (1:500; ab104225; Rabbit; Abcam, Cambridge, MA, USA), Beta-III Tubulin (1:500; MAB1637, Mouse; Kenilworth, NJ, USA), MAP2 (1:1000; Chicken; ab5392; Abcam, Cambridge, MA, USA), TBR1 (1:200; ab183032; Rabbit; Abcam, Cambridge, MA, USA), GFAP (1:500; ab4674; Chicken; Abcam, Cambridge, MA, USA), and Ki67 (1:500; ab245113; Mouse; Abcam, Cambridge, MA, USA) were incubated overnight. After washing, secondary antibodies (chicken 555, rabbit 488, mouse 647; Abcam, Cambridge, MA, USA) were incubated for 2 h. This was followed by 10 min of DAPI Staining Solution in PBS (1:1000, ab228549, Abcam, Cambridge, MA, USA) after which point slides were cover-slipped with ProLong Gold Antifade Mountant (Thermo Fisher Scientific, Waltham, MA, USA) mounting media and allowed to dry for 48 h.
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