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2 protocols using isotype igg antibody

1

RNA Immunoprecipitation of Myosin-10

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RIP was conducted using the EZ-Magna RIP RNA-Binding Protein Immunoprecipitation kit (Millipore) according to the manufacturer’s instruction (Sigma,17701). Briefly, 1 × 106 hiPSC-CMs were resuspended in 50 μl of RIP lysis buffer with protease inhibitor cocktail and RNase inhibitor. For each sample, 5 μg anti-human MYH10 antibody (1:400, Abcam, ab230823) was added and 1 μg isotype IgG antibody (1:200, Cell Signaling, 5415S) was used as the control. RIP–qPCR results were calculated as fold enrichment from specific antibody versus non-specific IgG (1:200, Cell Signaling, 5415S).
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2

Chromatin Immunoprecipitation Protocol

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Cells were harvested in IP lysis buffer (Thermo Fisher Scientific, 87788), containing protease and phosphatase inhibitors. Lysates were cleared by centrifugation at 10,000 g and protein concentrations were quantified with Pierce BCA (Thermo Fisher Scientific, 23225). Antibodies were coupled to protein A/G magnetic beads (Thermo Fisher Scientific, 26162) for 1 h at 4°C. 500 µg protein lysate was then incubated with 50 μl beads–antibodies complex overnight at 4°C. After repeated washing, proteins were eluted in NuPAGE LDS Sample buffer (Novex, NP0007) at 70°C in 10 min, followed by simple western analysis (Peggy Sue).
Co‐IP was performed using following antibodies: EZH2 (Active Motif, 39933, 1:100), POL2‐S2p (Active Motif, 61083, 1:100), POL2‐K7m (Active Motif, 65691, 1:100) and SUZ12 (Cell Signalling, 3737, 1:100). An isotype IgG antibody (Cell Signaling, 2729S) was used as a negative control.
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