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2 protocols using mouse monoclonal antibody

1

Western Blot Methodology for Protein Detection

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Western blots were conducted essentially as previously described (Burnette, 1981 (link); Dalia et al., 2015 (link)). Briefly, samples were prepared for western blots by growing strains to mid-log in 20 μg/mL carbenicillin and 100μM IPTG. Cells were then spun and cell free supernatants were collected and boiled in SDS PAGE sample buffer. The cell pellets were then washed and resuspended with an equal volume of 0.5X IO and then boiled in SDS PAGE sample buffer. Samples were electrophertically separated on 10% polyacrylamide gels and transferred to a nitrocellulose membrane. FLAG-tagged proteins were probed using rabbit polyclonal α-FLAG antibodies (Sigma), while RpoA was probed using a mouse monoclonal antibody (Biolegend). Blots were developed using IRDye 800CW labeled α-rabbit or α-mouse secondary antibodies as appropriate and imaged using a LI-COR Imaging system.
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2

Western Blot Analysis of IRF-3 Activation

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A western blot analysis was performed as described previously [18 (link)]. Cell lysates were resolved by SDS-PAGE and transferred to a low-fluorescence PVDF membrane (Azure Biosystems, Dublin, CA, USA). Individual proteins were labelled with specific antibodies and visualized by chemiluminescence and SuperSignal® West Femto Maximum Sensitivity Substrate (Thermo Scientific, Waltham, MA, USA) or by near infrared fluorescence using Azure Biosystems c600. IRF-3 was detected with a mouse monoclonal antibody (BioLegend, San Diego, CA, USA, dilution 1:1,000) and a peroxidase-conjugated goat anti-mouse antibody (Sigma Co., St. Louis, MO, USA, dilution 1:10,000); phosphorylated IRF-3 was detected with a rabbit monoclonal antibody (Cell Signaling Technology, Danvers, MA, USA) and a IR 700-conjugated goat anti-rabbit antibody (Azure Biosystems, Dublin, CA, USA, dilution 1:10,000); β-actin was detected with a rabbit polyclonal antibody (Abcam, Cambridge, UK, dilution 1:2,500) and peroxidase-conjugated goat anti-rabbit antibody (MP Biomedicals-Cappel, Solon, OH, USA, dilution 1:10,000); PARP-1 was detected with a rabbit polyclonal antibody (Santa Cruz Biotechnology, Dallas, TX, USA, dilution 1:500) and peroxidase-conjugated goat anti-rabbit antibody (MP Biomedicals-Cappel, Solon, OH, USA, dilution 1:10,000).
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