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Tcs sp8 system

Manufactured by Leica
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The Leica TCS SP8 system is a confocal microscope designed for high-performance imaging. It features advanced optics, detection systems, and software to enable detailed analysis of samples. The TCS SP8 system provides researchers with a powerful tool for various applications in life science research.

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69 protocols using tcs sp8 system

1

3D Reconstruction of Mitochondria using Confocal Microscopy

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Confocal images were acquired on a Leica TCS SP8 System equipped with a Leica DMi8 inverted microscope, using a Leica HC PL APO CS2 40X/1.30 oil immersion objective. Samples were illuminated with 405 nm laser line for the detection of DAPI signal and 561 nm tuned with light laser for the detection of both Cy3 signal and DIC image. The acquisition software used was the Leica Application Suite X, ver. 3.5.2.18963 (Leica, Wetzlar, Germany). An image format of 1024 × 1024 pixel was used and both optical zoom ×1 and ×2 were used for the samples acquisition.
For three-dimensional reconstruction of mitochondria, 0.5 μm thick Z-stacks were acquired using a Leica TCS SP8 System equipped with a Leica DMi8 inverted microscope; three-dimensional projections were generated using the Leica LAS X software.
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2

Immunofluorescence Staining of Lamin and γH2AX

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Cells were first rinsed with pre-warmed PBS, fixed with 4% paraformaldehyde (PFA, Fisher) for 15 min, washed x3 with PBS, and permeabilized with 0.5% Triton-X (Fisher) in PBS for 10 min. Fixed and permeabilized cells were then blocked with 5% BSA in PBS for a minimum of 1.5 hrs. Samples were then incubated overnight with primary antibody solution in 0.5% BSA solution with gentle shaking at 4 °C. The primary antibodies used were: LMNA (1:500, CST, #4777), LMNB (1:500, Santa Cruz, #sc-6217), and γH2AX (EMD Millipore, #05-636). Samples were then washed x3 in 0.1% BSA in PBS and incubated with the corresponding secondary antibodies at 1:500 dilution for 1.5 hrs at RT (Alexa Fluor 488, 546 and 647 nm; Invitrogen). Immunostained cells on gels or glass coverslips were mounted with mounting media (Invitrogen ProLong Gold Antifade Reagent). Epifluorescence imaging was performed using an Olympus IX71 with a digital EMCCD camera (Cascade 512B, Photometrics) and a 40 × /0.6 NA objective. Confocal imaging was done in Leica TCS SP8 system with either a 63 × /1.4 NA oil-immersion or 40 × /1.2 NA water-immersion objective. Image analysis was done with ImageJ.
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3

FLIM-FRET Analysis of H2B Dynamics

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Stable FLIM cells were generated using lentivirus that expresses PGK-H2B-GFP and PGK-H2B-mCherry, and FACS sorted to produce populations with homogenous expression. For FLIM-FRET experiments, cells were seeded into eight-well chambers (ibidi) and treated with DMSO, 750 nM A23817, or 0.4 U/ml Thrombin for 15 min, before being fixed in 4% PFA for 10 min. Lifetime measurements were taken on a Leica TCS SP8 system, using a white light laser with a repetition rate of 80 MHz and an excitation wavelength of 488 nm. H2B-GFP emission was detected over an emission range of 495–530 nm. Data were fitted using the FLIMfit software tool developed at Imperial College London.
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4

Optimizing Epifluorescence and Confocal Imaging

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Conventional epifluorescence images were taken using an Olympus IX71 microscope with a 40×/0.6-NA objective and a digital EMCCD camera (Cascade 512B; Photometrics), and confocal imaging was done on a Leica TCS SP8 system with a 63×/1.4-NA oil-immersion objective. Fixed samples were either immersed in PBS for epifluorescence or mounted with antifade (Prolong Gold, P10144; Thermo Fisher Scientific) for confocal microscopy at room temperature. All fluorochromes (secondary antibodies) are listed in Immunostaining. Higher-NA lenses give higher-resolution images and should increase foci counts. Only Fig. S2 (B and D) in this study and images in Irianto et al. (2017) (link); Fig. 3 Ci) were taken using the 40×/0.6 NA objective, and control cells consistently show ∼10 γH2AX foci. Other images of γH2AX here and in Irianto et al. (2017) (link) (Fig. 1, C and D) were all taken with a 63×/1.4 NA objective, and control cells consistently show ∼15 γH2AX foci. Raw images were used directly for image quantification, and ImageJ was the only software used for analysis.
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5

IF Visualization of Nuclear-Cytoplasmic Hlc

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IF was used to visualize the nuclear-cytoplasmic distribution of the wild-type and mutant Hlc. IF was performed as previously described (15 (link),30 (link),31 (link)). In brief, after treatment with fixative solution (75% methanol (v/v) and 25% glacial acetic acid (v/v)), fixed cells were permeabilized with 0.1% Triton X-100 (v/v) in TBST buffer (Tris-Buffered Saline Tween-20 pH 7.6: 0.242% Tris–HCl (w/v), 0.8% NaCl (w/v) and 0.05% Tween-20 (v/v)) at room temperature for 10 min and incubated with the indicated primary antibody in the presence of 5% bovine serum albumin (w/v; Beyotime, ST025) at 4°C overnight. After incubation with the fluorophore-conjugated secondary antibody, 1 μg/ml DAPI (Beyotime, C1002) was used to stain nuclei for 5 min before confocal microscopy analyses. Fluorescence signals were detected using the Leica TCS SP8 system and quantified using Image J. Line profiles were analyzed using Image-Pro Plus 6.0. These antibodies were used in IF: anti-Hlc (raised against amino acids 545–560 of the endogenous Drosophila Hlc), anti-FLAG (Beyotime, AF519), Alexa Fluor 555-labeled anti-mouse IgG (Beyotime, A0460) and Alexa Fluor 555-labeled anti-rabbit IgG (Beyotime, A0453).
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6

Subcellular Localization and Overexpression of LcASC

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The subcellular localization analysis was carried out as described in previous work [25 (link)]. In brief, the full sequence of LcASC ORF was amplified with specific primers for sASC-F/R, as shown in Table S1. The whole CDS region of LcASC was inserted into the pEGFP-N1 plasmid to construct a eukaryotic expression vector. pEGFP-N1-LcASC and pEGFP-N1 were extracted with a small amount of the plasmid extraction kit (TIANMO, China). Large yellow croaker kidney cell lines were inoculated onto a 24-well cell culture plate and cultured until cells adhered to 80–90%. The pEGFP-N1-LcASC and pEGFP-N1 were transfected into the kidney cells for 24 h by the electron-transfected method, and the cells were then fixed and stained. Finally, the cells were observed with laser scanning confocal observation (Leica TCS SP8 system, Berlin, Germany) under two channels of DAPI excitation light and GFP excitation light.
For overexpression, the whole CDS region of LcASC was inserted into the pcDNA3.1 vector and transfected into HEK 293T cells using the Lipo8000 TM transfection reagent. After 24 h post-transfection, the cells were harvested for Western blot to examine the expression level of the LcASC protein.
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7

Epifluorescence and Confocal Microscopy Imaging

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Conventional epifluorescence images were taken using an Olympus IX71 microscope with a 40×/0.6 NA objective and a digital electron-multiplying charge-coupled device camera (Cascade 512B; Photometrics). Confocal imaging was done on a Leica TCS SP8 system with a 63×/1.4 NA oil-immersion objective.
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8

Confocal Imaging of Photosynthetic Complexes

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Confocal images were recorded on an (inverted) confocal Leica TCS SP8 system equipped with a 63 × 1.20 NA water immersion objective. Chloroplasts were freshly isolated, and Chls were excited at 633 nm with a pulsed laser (40 MHz) and an intensity of 100 nW. The fluorescence was detected at 650–680 nm (PSII-maximum) and 710–750 nm (PSI-maximum) with internal hybrid detectors. The total image size was 9.2 * 9.2 μm, with 128*128 pixels.
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9

Probing Nuclear Dynamics via Transwell Assay

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For migration through transwells (Corning Inc.), cells were seeded at 300,000 cells/cm2 onto the topside of the filter membrane and left to migrate in normal culture condition for either 9 or 24 hours. For experiments involved CDK1i, cells were exposed to 9 µM CDK1i and DMSO for 1 hour prior to the seeding onto Transwells. Transwell membrane was fixed in 4% formaldehyde (Sigma) for 15 minutes, followed by permeabilization by 0.25% Triton-X (Sigma) for 10 minutes, blocked by 5% BSA (Sigma) and overnight incubation in various primary antibodies: lamin-A/C (Santa Cruz), lamin-B (Santa Cruz) and cGas (Cell Signalling). Finally, the primary antibodies were tagged with the corresponding secondary antibodies for 1.5 hours (ThermoFisher). DNA was stained with 8µM Hoechst 33342 (ThermoFisher) for 15 minutes. Confocal imaging was performed on a Leica TCS SP8 system using a 63×/1.4 NA oil-immersion lens.
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10

Multicolor Fluorescent Imaging of Mitochondria and Plasma Membrane

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Cells were plated for 24 h at a density of 1.5 × 104 cells/well and then treated with pmOGT-HaloTaq or pHaloTaq as described in the cell culture and treatment section. 48 h after transfection, the medium of the cells was replaced for 30 min with medium containing cell-permeable HaloTaq® Coumarin Ligand (PromegaTM). The medium was then replaced for 30 min with an equal volume of fresh, warm culture medium containing the cell-permeant dye Mito TrackerTM Red FM (Thermo ScientificTM), which accumulates in active mitochondria in living cells. To remove excess dye from the cells, the monolayers were washed twice with fresh warm culture medium for 15 min. DiOC18(3), which intercalates into the plasma membrane, was used to stain living cells. The fluorescence emission signals were recorded at 25 °C and 63× magnification using a Leica TCS SP8 system.
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