The largest database of trusted experimental protocols

5 protocols using phastgel ief 3 9

1

Protein Characterization by SDS-PAGE and IEF

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein concentration was determined with a Quick Start Bradford protein assay kit (Bio-Rad Laboratories, Hercules, CA, USA). The apparent molecular mass of the enzymes was determined by SDS-PAGE in a 10–15 % polyacrylamide gel gradient as described by Laemmli. 17) A BenchMark Ladder (Invitrogen, Carlsbad, CA, USA) provided the standard protein markers. The molecular mass of the native enzyme was determined by native-PAGE in an 8–25 % polyacrylamide gel gradient as described by Davis. 18) The HMW marker kit (GE Healthcare, Chicago, IL, USA) provided the standard protein markers. The p I for thyroglobulin (669 kDa), ferritin (440 kDa), catalase (232 kDa), lactate dehydrogenase (140 kDa), and albumin (66 kDa) in the protein marker mix were 4.5, 4.5, 5.4, 5.0, and 4.9, respectively. The apparent p I of the enzyme was determined by isoelectric focusing on a Phastgel IEF 3–9 using the Phastsystem (GE Healthcare, Chicago, IL, USA). The proteins were stained with Rapid CBB KANTO (Kanto Chemical Co. Inc., Chuo-ku, Japan).
+ Open protocol
+ Expand
2

Protein Characterization by SDS-PAGE and IEF

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein concentration was determined using Quick Start Bradford Protein Assay (Bio-Rad, USA). The apparent molecular mass of the enzymes was determined using SDS-PAGE in 10–15 % gradient polyacrylamide gels as described by Laemmli.11) (link) Benchmark Ladder (Invitrogen) was used as standard protein markers. The molecular mass of the native enzymes was determined using native-PAGE in 8–25 % gradient polyacrylamide gels as described by Davis.12) HMW Marker Kit (GE Healthcare) was used as standard protein markers. The pI values of thyroglobulin (669 kDa), ferritin (440 kDa), catalase (232 kDa), lactate dehydrogenase (140 kDa), and albumin (66 kDa) present in the protein marker are 4.5, 4.5, 5.4, 5.0, and 4.9, respectively. The apparent pI of the enzymes was determined using isoelectric focusing on a Phastgel IEF 3–9 and the Phastsystem (GE Healthcare). Proteins were stained using Rapid CBB KANTO (Kanto Chemical, Japan).
+ Open protocol
+ Expand
3

Protein Purification Protocol with Q-Sepharose

Check if the same lab product or an alternative is used in the 5 most similar protocols
Q-Sepharose FF, dextran (T20, T40, T70, and T500), and PhastGel IEF 3-9 were obtained from GE Healthcare (Uppsala, Sweden). A prestained protein PAGE ruler was obtained from Fermentas (Waltham, MA, USA). An oligosaccharide kit, an IEF protein mix 3.6–9.3, bovine serum albumin, crystal violet, (CV), and Coomassie brilliant blue R250 and G250 were purchased from Sigma-Aldrich (St. Louis, MO, USA). All other reagents were purchased from Sinopharm Chemical Reagent Corporation (Shanghai, China) and were of the highest analytical grade.
+ Open protocol
+ Expand
4

Isoelectric Point Determination

Check if the same lab product or an alternative is used in the 5 most similar protocols
Calculation of isoelectric point (pI) was carried out using the Protean module 8.1.4 of DNASTAR Lasergene (USA). Isoelectric focusing (IEF) was carried out using a pre-casted gel with PhastGel IEF 3–9 (17-0543-01; GE Healthcare) and PhastSystem (GE Healthcare, Uppsala, Sweden). The protein bands were visualized by PhastGel Blue R (17-0518-01, GE Healthcare) staining.
+ Open protocol
+ Expand
5

Protein Sequencing and Isoelectric Focusing

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein samples for sequencing were electrotransferred onto a PVDF membrane (Immobilon-P) according to the protocol outlined by Matsudaira [51 (link)]. The NH2-terminal amino acid sequence of the excised band was determined using an Applied Biosystems model 491A sequencer (Foster City, CA, USA) located in the Korea Basic Research Institute (Daejeon, Korea).
Isoelectric focusing (IEF) was carried out using a precasted gel with PhastGel IEF 3–9 (17-0543-01; GE Healthcare) on a PhastSystem (GE Healthcare), as described elsewhere [52 (link)]. The protein bands were visualized by PhastGel Blue R (17-0518-01, GE Healthcare) staining. The range of isoelectric point (pI) for the migrated bands was compared with known pI standard proteins, Serva Liquid Mix (Cat. 39212-01, Invitrogen, Carlsbad, CA, USA) containing amyloglucosidase (pI = 3.6), β-Lactoglobin (pI = 5.1), myoglobin (pI = 6.6), and ribonuclease A (pI = 9.3).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!