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5 protocols using mosaic digital micromirror device

1

Visualizing TES-1 Dynamics in Cells

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A tes-1 LCR::mCherry construct was designed and expressed using the procedures described in detail by Winkelman et al.2 (link). Briefly, a synthetic gBlock DNA encoding a mammalian codon-optimized version of the LIM1-3 domain of TES-1 was ordered from IDT (Coralville, Iowa) and cloned into a CMV-driven expression vector that fused the C-terminus of LCR(Tes) to mCherry, and used to transfect zyxin −/− mouse embryo fibroblast cells (MEFs) rescued with stably integrated GFP-zyxin. Transfected MEFs were imaged on an inverted Nikon Ti-E microscope (Nikon, Melville, NY) with a Yokogawa CSU-X confocal scanhead and Zyla 4.2 sCMOS Camera (Andor, Belfast, UK). A 405 nm laser coupled to a Mosaic digital micromirror device (Andor) was used to locally damage stress fibers. Kymography of TES-1(LIM1-3)::GFP was performed using ImageJ as described in 2 (link).
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2

Optogenetic Recruitment Microscopy Protocol

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Glass coverslips were placed in a Chamlide magnetic chamber (Live Cell Instrument, Seoul, Korea) in culture media supplemented with 10 mM HEPES and 30 μl ml−1 Oxyrase (Oxyrase Inc., Mansfield, OH) and maintained at 37 °C. Cells were imaged on an inverted Nikon Ti-E microscope (Nikon, Melville, NY) with a Yokogawa CSU-X confocal scanhead (Yokogawa Electric, Tokyo, Japan) and laser merge module containing 491, 561 and 642 nm laser lines (Spectral Applied Research, Ontario, Canada). Images were collected on either a CoolSNAP HQ2 CCD (Roper Scientific, Trenton, NJ) or Zyla 4.2 sCMOS Camera (Andor, Belfast, UK). Local recruitment using the optogenetic probe was performed using a 405 nm laser coupled to a Mosaic digital micromirror device (Andor). Images were collected using a 60 × 1.49 NA ApoTIRF oil immersion objective (Nikon). All hardware was controlled using the MetaMorph Automation and Image Analysis Software (Molecular Devices, Sunnyvale, CA).
Unless otherwise stated, cells were imaged in the 561 channel every 20 s for 45 min, with the first 15 min used to determine the steady state of the system, the second 15 min to perform local recruitment and the final 15 min to record any recovery. During recruitment, a local region drawn in MetaMorph was illuminated by the 405 nm laser for 960 ms at a power <1 μJ s−1 immediately before the acquisition of each 561 image.
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3

Cellular photoactivation and force measurements

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Cell imaging and activation intended for posterior force measurements was carried out using a Nikon Ti-E microscope, Zyla sCMOS camera (Andor, Belfast, UK), and a Plan Apo VC 60×/1.40 Oil objective (Nikon, Tokio, Japan). The microscope was equipped with an incubator that maintains the temperature at 37°C. Global cellular photoactivation was performed using a LED light source (X-Cite/XLED1, Lumen Dynamics, Canada) coupled to a Mosaic digital micromirror device (Andor). Depending on the experiment done, activation pulses were 10-20-50-100-150-200 ms long using an LED at 460 nm with a power of 256.7 μW (measured at the back focal plane of the objective). For our Apo VC 60× Nikon NA 1.4 objective, the transmission coefficient at 450 nm is 74% (data from Nikon). From this we deduce the energy sent to the cells by dividing the intensity transmitted by the objective by the surface of the digital micromirror device (DMD). The physical size of our DMD is 854 × 480 pixels for our 60× objective and this gives us an irradiance of 52.7 mW/mm2. This finally gives the following energy per pulse sent to the cells of 0.527, 1.054, 2635, 5270, 7905, and 10,540 mJ/mm2 for each pulse of 10, 20, 50, 100, 150, and 200 ms, respectively.
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4

Optoregulation of Cellular Dynamics

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Optogenetic experiments were performed on an inverted Nikon T-E (Nikon, Melville, NY) with a laser merge module with 491, 561, and 642nm laser lines (Spectral Applied Research, Ontario, Canada) with a Yokogawa CSU-X confocal scanning head (Yokogawa Electric, Tokyo, Japan). The Zyla 4.2 sCMOS Camera (Andor, Belfast, UK) collected the images. Optogenetic activation was achieved using a Mosaic digital micromirror device (Andor) attached to a 405nm laser. Images were collected on a 60X 1.2 Plan Apo water (Nikon) objective. MetaMorph Automation and Image Analysis Software (Molecular Devices, Sunnyvale, CA) controlled all hardware. Fix-and-stain and live-cell imaging of CN03 wash-ins were performed on an LSM 980 system with an Airyscan 2 (Zeiss) detector in super resolution-mode with a 63x NA1.4 oil objective (Zeiss). Microscopy software used was the Zen digital imaging suite (Zeiss).
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5

Confocal Microscopy and Optogenetic Recruitment

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Cells were imaged on an inverted Nikon Ti-E (Nikon, Melville, NY) with a Yokogawa CSU-X confocal scanning head (Yokogawa Electric, Tokyo, Japan) and laser merge model with 491, 561, and 642nm laser lines (Spectral Applied Research, Ontario, Canada). Images were collected on a Zyla 4.2 sCMOS Camera (Andor, Belfast, UK). Optogenetic recruitment utilized a Mosaic digital micromirror device (Andor) coupled to a 405-nm laser. A 60× 1.49 NA ApoTIRF oil immersion objective (Nikon) or a 60× 1.2 Plan Apo water (Nikon) objective was used to collect images. MetaMorph Automation and Image Analysis Software (Molecular Devices, Sunnvyale, CA) controlled all hardware.
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