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Ipp version 6

Manufactured by Media Cybernetics
Sourced in United States

IPP version 6.0 is a software product developed by Media Cybernetics. It is a digital image processing platform that provides tools for analyzing and manipulating digital images. The software supports a variety of image file formats and offers a range of image processing functions, including image enhancement, segmentation, and measurement.

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4 protocols using ipp version 6

1

Apoptosis Assessment of Rat Disc Organ Culture

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Rat disc organ culture was carried out as we previously described (35 (link)). Ex vivo, discs were pretreated with 100 μM RV for 24 h or 2 mM NAC for 12 h or 100 μM PTIO for 12 h, then treated with or without 1 mM SNP for 18 h. Then the harvested discs were fixed in 4% paraformaldehyde, and then decalcified with EDTA for 2 weeks. After embedding with paraffin, 5-μm thick serial mid-sagittal sections of discs were made for slides. Mid-sagittal sections of discs were analyzed for apoptosis using in situ cell death detection kit according to manufacturer's instructions. DAPI staining was conducted for indication of total cells. TUNEL-positive apoptotic cells and DAPI-positive total cells of NP area on mid-sagittal sections of discs were identified by fluorescent microscope (IX71; Olmypus), and apoptosis rate was calculated as the percentage of numbers of TUNEL-positive cells to the numbers of total cells using IPP version 6.0 software (Media Cybernetics). The quantitative analysis was performed on three ×200 fields/section (three sections/disc and three discs for each kinds of treatment).
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2

Mitochondrial Membrane Potential Imaging

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Mitochondrial membrane potential was measured with TMRM staining. NP cells were incubated with 100 nM TMRM at 37°C in dark for 30 min, washed with PBS 3 times and covered with fresh medium. NP cells were subsequently imaged using microscope (IX71, Olmypus). The excitation wavelength for TMRM was 549 nm. Three images (×200) of each kind of treatment were obtained for quantitative analysis of fluorescence intensity of the TMRM using IPP version 6.0 software (Media Cybernetics, Bethesda, MD, USA). The fluorescence intensity of the TMRM was expressed as mean density in IPP version 6.0 software.
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3

Quantifying Muscle Collagen Changes

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After the nerve samples were removed, the animals were sacrificed and the gastrocnemius muscles were rapidly and completely resected from the injured and normal sides and weighed. The wet weight ratio of gastrocnemius muscle was calculated by comparing the weight of the gastrocnemius muscle on the left (experimental) side to that on the right (normal) side. Then, the gastrocnemius muscle samples of the injured side were fixed in 4% paraformaldehyde at 4 °C overnight, embedded in paraffin, cut into 5-mm sections, and stained with Masson’s trichrome. The images were captured by an E600 microscope (Nikon, Tokyo, Japan) at a magnification of 200x and the collagen fiber percentage was quantitatively analyzed using IPP version 6.0 software (Media Cybernetics).
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4

Histological Evaluation of Cartilage Degeneration

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After the macroscopic observation, the specimens were embedded in paraffin and cut into 5 μm sections. These sections were stained with haematoxylin and eosin and with safranin O for evaluation. The degenerative changes were graded by 2 blinded observers using the histological grading scale proposed by Masuda et al [31] (link) (Table 2).
Type II collagen expression was detected using a mouse monoclonal antibody (1∶200; Abcam, Cambridge, MA) and a horseradish peroxidase-conjugated anti-mouse antibody (1∶50; Dako, Denmark), followed by colour development with diaminobenzidine tetrahydrochloride (DAB, Dako). The results of type II collagen staining were quantified in mean density with the IPP version 6.0 software (Media Cybernetics, Bethesda, MD, USA).
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