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5 protocols using piperacillin sodium salt

1

Preparation of Antibiotic Stock Solutions

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C109 was synthesized as previously described (12 (link)). Antibiotic working stock solutions were prepared as follows: C109, 10 mg/ml in dimethyl sulfoxide (DMSO); trimethoprim, 50 mg/ml in DMSO (Sigma); doxycycline hyclate, 25 mg/ml in H2O (Sigma); chloramphenicol, 20 mg/ml in ethanol (EtOH; Sigma), meropenem, 10 mg/ml in DMSO (Sigma); tobramycin sulfate, 10 mg/ml in H2O (Alfa Aesar); ceftazidime, 10 mg/ml in 0.1 M NaOH (Sigma); ciprofloxacin, 10 mg/ml in 0.1 M HCl (Sigma); novobiocin sodium, 10 mg/ml in H2O (Sigma); and piperacillin sodium salt, 10 mg/ml in H2O (Sigma). IPTG and L-rhamnose were obtained from Sigma.
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2

Quantification of Antibiotic Compounds

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Piperacillin sodium salt, tazobactam, cefazolin, ampicillin, and sulbactam, were purchased from Sigma-Aldrich (St. Louis, MO, USA). 2H5-Piperacilline was purchased from Alsachim Lab (Strasbourg, France). Acetonitrile, methanol, water, and formic acid, all of which were LC/MS grade, were purchased from Fisher Scientific (Fairlawn, NJ, USA). Human plasma with lithium heparin were purchased from BioreclamationIVT (Westbury, NY, USA). All chemicals were of the highest purity available from commercial providers.
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3

ATP Reduction in E. coli Exposed to Antimicrobials

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E. coli K12 MG1655 (ATCC 700926) cells (5 × 105 CFU mL−1 mid-log phase in CAMHB) were exposed to various MIC-folds (MIC and 1/4×, 1/2×, 2×, 4×, 8×, 16×, 32× MIC) of arenicin-3 (MIC 0.25 μg mL−1), AA139 (MIC 0.125 μg mL−1), piperacillin sodium salt (Sigma-Aldrich, Cat # P8396; MIC 2 μg mL−1), and colistin sulfate (Sigma-Aldrich, Cat # C4461; MIC 0.03 μg mL−1). ATP was measured using the BacTiter-GloTM Microbial Cell Viability Assay (Promega) following the manufacturer’s instructions. The assay was performed for three biological replicates at 37 °C, with luminescence recorded using a Tecan Infinite M1000 Pro plate reader. The fold reduction of ATP was calculated as: Fold reduction ATP = 1 − (Ltreat − Lmedia/Lcontrol − Lmedia); where Ltreat is the luminescence of treated cells, Lmedia is the luminescence of CAMHB without cells, and Lcontrol is the luminescence of untreated cells. Resultant graphs show mean (n = 7) and std error for each data point, prepared in Prism 8. DMSO was included as a control as piperacillin was solubilized in DMSO, with final assay concentration of 2.5%.
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4

Antibiotic Resistant E. coli Strain Characterization

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For these experiments, we used an Escherichia coli DH5α strain harbouring two plasmids32 (link) (a kind gift from Professor Jeff Gore, MIT, USA). The first plasmid carries a constitutively expressed YFP gene; we used 50 µg/ml of piperacillin sodium salt (Sigma-Aldrich, Germany) for selection. The second plasmid carries the gene encoding TEM-20, with 50 µg/ml of kanamycin sulfate (Sigma-Aldrich) used for selection. All experiments, both in bulk and in droplets, were carried out in LB Lennox medium (Roth, Germany). Antibiotic susceptibility experiments were done with cefotaxime sodium salt (Sigma-Aldrich). Overnight cultures were diluted to the required densities with fresh medium before droplet experiments were begun, and cells were kept at 4 °C until they were encapsulated in droplets.
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5

SH-SY5Y and Primary Neuron Cell Culture

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Human SH-SY5Y cell line was purchased from American Type Culture Collection (ATCC) and maintained as the manufacture's instructions. SH-SY5Y cells were grown in 1: 1 mixture of Eagle's Minimum Essential Medium (ATCC, US) and F12 medium supplemented with 10% fetal bovine serum (FBS, Hyclone, UK) and penicillin/streptomycin (Sigma, US). Human primary neuron cells (ScienCell, US) were maintained in complete Neuronal Medium (ScienCell, US). Piperacillin sodium salt and N-Acetyl-L-cysteine (NAC) were purchased from Sigma and reconstituted in H 2 O.
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