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3 protocols using alexa fluor 488 conjugated donkey anti rabbit igg

1

Antibody Characterization for Protein Detection

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The rabbit monoclonal antibodies (mAb) against phospho-eIF2α (Ser51) and eIF2α were purchased from Cell Signaling Technology (Beverly, MA, USA). Mouse mAb against beta-actin was obtained from Medical and Biological Laboratories (MBL, Nagova, Japan). Antibodies against TIA1 (goat polyclonal), G3BP1 (rabbit polyclonal), TIAR (goat polyclonal), and eIF3η (goat polyclonal) were purchased from Santa Cruz Biotechnology, Inc (Santa Cruz, CA, USA). Rabbit mAb against NF-κB p65 and phospho-NF-κB p65 were purchased from Cell Signaling Technology. Mouse mAb against PRRSV nucleocapsid (N) protein was prepared by our laboratory. Alexa Fluor 594-conjugated donkey anti-goat IgG, Alexa Fluor 594-conjugated donkey anti-rabbit IgG, Alexa Fluor 488-conjugated donkey anti-rabbit IgG, Alexa Fluor 488-conjugated donkey anti-mouse IgG, and Alexa Fluor 647-conjugated donkey anti-mouse IgG were also obtained from Santa Cruz Biotechnology, Inc. Horseradish peroxidase (HRP)-conjugated goat anti-rabbit, HRP-conjugated goat anti-mouse, and HRP-conjugated donkey anti-goat were purchased from Medical and Biological Laboratories (MBL).
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2

Immunofluorescence analysis of IRF3 and NF-κB localization

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IFAs were performed to examine the subcellular localization of endogenous IRF3 and NF-κB subunit p65 in LLC-PK1 or HEK-293T cells. Cells seeded on microscope coverslips in 24-well plates were transfected with the indicated expression plasmid when the cells reached approximately 80% confluence. After 24 h, the cells were mock-infected or infected with SEV for 6 h. The cells were fixed with 4% paraformaldehyde for 15 min and then permeated with methyl alcohol for 10 min at room temperature. After three washes with PBST, the cells were sealed with PBST containing 5% bovine serum albumin (BSA) for 1 h, followed by incubation separately with a rabbit polyclonal antibody against IRF3 (1:200) or against p65 (1:200) or a mouse anti-HA antibody (1:200) for 1 h at room temperature. The cells were then treated with secondary antibodies Alexa Fluor 594-conjugated donkey anti-mouse IgG and Alexa Fluor 488-conjugated donkey anti-rabbit IgG (Santa Cruz Biotechnology) for 1 h at 37 °C, followed by treatment with 4ʹ, 6-diamidino-2-phenylindole (DAPI) (Beyotime, China) for 15 min at room temperature. After the samples were washed with PBST, fluorescent images were visualized and examined with a confocal laser scanning microscope (Fluoviewver. 3.1; Olympus, Japan).
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3

Rv2029c Interacts with TLR2 in Macrophages

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WT, TLR2−/−, and TLR4−/− peritoneal mouse macrophages isolated as described above were cultured overnight and then incubated with Rv2029c (10 μg/ml) for 2 h at 37°C. Following treatment, cells were fixed with 4% paraformaldehyde (PFA) for 15 min and permeabilized in 0.1% Triton X-100 (PBST) for 15 min. After blocking with 5% BSA in PBS containing 5% goat serum and 0.1% Tween-20 for 2 h, cells were treated with anti-TLR2 (1:200) and anti-His (1:500) antibodies overnight at 4°C, followed by an Alexa Fluor®568-conjugated donkey anti-mouse IgG (Santa Cruz Biotechnology) or an Alexa Fluor®488-conjugated donkey anti-rabbit IgG (Santa Cruz Biotechnology) secondary antibody for 2 h in the dark. Cells were then stained with 0.5 g/ml DAPI (Santa Cruz Biotechnology) for 5 min at room temperature. After washing, the cells were mounted onto slides using ProLong® Gold Antifade Mountant (Thermo Fisher Scientific) and observed using a 60 × oil objective on a Zeiss LSM 710 confocal laser microscope (Carl Zeiss). Images were acquired using LSM710Meta software and processed using image J (1.4.4).
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