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5 protocols using human vegf a165

1

Recombinant Human WARS Isoforms Expression

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Human plasma fibronectin (R&D Systems, 1918-FN-02M, 3 µg/ml), human NRP1-Fc (R&D Systems, 10455-NI-050), human VE-Cadherin-Fc (R&D Systems, 938-VC-050) and human IgG1-Fc (R&D Systems, 110-HG-100); recombinant human VEGF-A165 (R&D Systems, 293-VE).
For the expression and purification of recombinant human WARS isoforms, DNA encoding human FL-WARS, mini-WARS, or T2-WARS with a N-terminal His6-SUMO tag was cloned into pET-28a (+) vector (Novagen). WARS expression was induced in E. coli BL21(DE3) cells with 1 mM isopropyl beta-d-thiogalactopyranoside. Following cell lysis, WARS was purified using Ni-NTA beads (Qiagen). The N-terminal His6-SUMO tag was cleaved with sumo protease ULP1. The resulting tag-free WARS proteins were further purified using HiLoad 16/60 Superdex 200 prep grade column (GE Healthcare).
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2

VEGF Binding Affinity Measurement

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The binding affinities of nVEGFi and aflibercept were measured by a human VEGF ELISA kit (Novus Biologicals) to detect residual unbound human VEGF in mixtures of nVEGFi or aflibercept (0.05–400 pM) with human VEGF-A165 (R&D Systems) (at a final concentration of 10 pM) and incubated at RT overnight. VEGF concentration (pM) was plotted as a function of increasing anti-VEGF molecule concentration (pM).
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3

Investigating Molecular Mechanisms in Cancer

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EHT1864 was purchased from Tocris, NSC23766 was purchased from Selleckchem, FAK14 was purchased from Sigma, Sunitinib and Pazopanib were purchased from LC Laboratories, human VEGFA165 was purchased from R&D Systems and the function-blocking Neuropilin-2 antibody was provided by Genentech (11 (link)). Immunoblotting antibodies were acquired as follows: Actin (A2066, Sigma), TAZ (560235, BD Biosciences), YAP/TAZ (8418S, Cell Signaling Technologies), pS89 TAZ (sc-17610, Santa Cruz Biotechnology), pS127 YAP (4911A, Cell Signaling Technologies), Neuropilin-2 (sc-7242, Santa Cruz Biotechnology), β2-chimaerin (CHN2) (HPA018989, Sigma), pT1079 LATS1 (8654S, Cell Signaling Technologies), LATS1 (9153S, Cell Signaling Technologies), VEGF (sc-152, Santa Cruz Biotechnology), Rac1 (610650, BD Biosciences), Pan-TEAD (13295S, Cell Signaling Technologies), pS518 Merlin (9163S, Cell Signaling Technologies), Merlin (6995S, Cell Signaling Technologies), HA-Tag (3724S, Cell Signaling Technologies), GST (sc-138, Santa Cruz Biotechnology) and Myc-Tag (2278S, Cell Signaling Technologies).
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4

Quantifying VEGF Ligand Binding by MSD

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A MSD high bind 96-well plate was coated with 2 μg/ml human VEGF-A165 (purified as described above), VEGF-A121, VEGF-B167, VEGF-C, VEGF-D, or mouse VEGF-164 (all from R&D Systems) in PBS, and the sealed plates were incubated overnight at 4 °C. The following day the plates were washed with Tris wash buffer (MSD) and blocked with 3% BSA in PBS for 1 h at room temperature. Plates were washed as described above before the addition of standard concentrations of VEGF dual dAb diluted in 0.1% BSA in PBS and incubated at room temperature for 2 h. Plates were washed again before the addition of the detection reagent (in-house sulfo-TAG-labeled goat anti-human IgG, Fc-specific; Sigma) at 1 μg/ml in 1% BSA in PBS and incubated at room temperature for 1 h. Plates were washed, and 2× Read Buffer T (MSD) was added before being read on a SECTOR 6000 MSD imager. GraphPad Prism was used to fit curves using a sigmoidal dose response (variable slope) model and to calculate the EC50 values, (with S.D. calculated over the mean) from n = 3 experiments.
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5

Antibody Reagents for VEGFR Signaling

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The following antibodies were used for immunoblotting throughout this study: rabbit anti-Flag (#2368; Cell Signaling Technology) and goat anti-VEcad (C-19; Santa Cruz Biotechnology, Inc.). Total and phospho-VEGFRs were detected with rabbit anti-VEGFR2 (#2479; Cell Signaling Technology), goat anti-HsVEGFR3 (AF349; R&D Systems), goat anti-MmVEGFR3 (AF743; R&D Systems), rabbit anti-VEGFR2pY1175 (#2478; Cell Signaling Technology), rabbit anti-VEGFRpY1054/9 (44-1047G; Invitrogen), and rabbit anti-VEGFR3pY1230/1 (CY1115; Cell Applications). Other phospho-antibodies used for immunoblotting include rabbit anti-SFKpY416 (#6943; Cell Signaling Technology), rabbit anti-p85pY458 (#4228; Cell Signaling Technology), rabbit anti-AktpS473 (700392; Invitrogen), and rabbit ant-p65pS536 (#3033; Cell Signaling Technology). Anti–VCAM-1 was obtained from Abcam (ab134047). Loading control antibodies include rabbit anti–β-Actin (N-21; Santa Cruz Biotechnology, Inc.), rabbit anti-p85 (06-497; EMD Millipore), goat anti-HA (#ab9134; Abcam), rabbit anti–β-Catenin (#9562; Cell Signaling Technology), rabbit anti-GFP (A11122; Invitrogen), and mouse anti-Tubulin (DM1A; Sigma-Aldrich). Human VEGF-A165 was obtained from R&D Systems (293-VE-010).
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