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Microtof q hybrid quadrupole time of flight mass spectrometer

Manufactured by Bruker
Sourced in United States

The MicroTOF-Q is a hybrid quadrupole time-of-flight mass spectrometer manufactured by Bruker. It combines a quadrupole mass analyzer with a high-resolution time-of-flight mass analyzer, enabling accurate mass measurements and high-sensitivity detection of a wide range of analytes.

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5 protocols using microtof q hybrid quadrupole time of flight mass spectrometer

1

LC-MS Protocol for Metabolite Analysis

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For LC–MS, the LaChromUltra (Hitachi Europe Ltd., UK) HPLC system coupled to a microTOF-Q hybrid quadrupole/time-of-flight mass spectrometer (Bruker Daltonics, Bremen, Germany) was used, equipped with an electrospray ionization (ESI) source.
2 μL of the sample was separated with the SeQuant® ZIC®-pHILIC 5 µm Polymeric column (150 × 2.1 mm) (Merck, Darmstadt, Germany). Eluent A (20 mM NH4HCO3, pH 9.3, adjusted with aqueous ammonia solution) and eluent B (acetonitrile) were applied at a flow rate of 0.2 mL min−1 by use of following gradient: 0 min B: 90%, 30 min B: 25%, 37.5 min B: 25%, 40.0 min B: 80%.
The ESI source was operated in negative ionization mode. The temperature of the dry gas and the capillary was set to 180 °C. The scan range of the MS was set to 200–1000 m/z.
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2

UHPLC-QTOF Analysis of Metabolites

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The UHPLC analysis was performed using an Acquity UHPLC System (Waters) equipped with a HSS T3 column (100 × 1.0 mm, particle size 1.8 μm; Waters). The analysis was carried out by applying the following binary gradient at a flow rate of 150 μL min−1: 0–1 min, isocratic 95% A (water/formic acid, 99.9/0.1 [v/v]), 5% B (acetonitrile/formic acid, 99.9/0.1 [v/v]); 1–16 min, linear from 5 to 95% B; 16–18 min, isocratic 95% B; and 18–20 min, isocratic 5% B.14 (link) The injection volume was 3.1 μL (full loop injection). Eluted compounds were detected from m/z 90 to 1000 using a MicroTOF-Q hybrid quadrupole time-of-flight mass spectrometer (Bruker Daltonics) equipped with an Apollo-II electrospray ion source in negative and positive (deviating values in brackets) ion modes using the following instrument settings previously reported.15 (link)
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3

Phytochemical Profiling of Plant Extracts

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Samples of air-dried and ground plant material (0.5 g leaves) were extracted with ethanol–water (50:50, v/v) in a water bath at 60–70 °C. The extract was purified using a C16 Diapack cartridge and dissolved in 70% ethanol. Mass spectrometric analysis was carried out at the Novosibirsk Institute of Organic Chemistry SB RAS (Novosibirsk, Russia). HPLC-MS analysis was performed using an Agilent 1200 liquid chromatograph (Agilent Technologies, USA) and a micrOTOF-Q hybrid quadrupole-time-of-flight mass spectrometer (Bruker, Germany) with API-ES. Positive ions were identified in the range of 100–3000 m/z. Chromatographic separation was carried out at 30 °C using a Zorbax SB-C18 column (2.1 mm × 150 mm, inner diameter 3.5 µm) with a ZorbaxSB-C8 guard column (2.1 mm × 12.5 mm, inner diameter 5 µm). The composition of the mobile phase changed in a linear gradient from 15:85 (v/v) methanol (phase A) and 2% formic acid in water (phase B) to 100:0 (v/v) in 30 min, then in isocratic mode from 30 to 45 min. The volume of the injected sample was 10 µL. UV detection was carried out at four wavelengths/bandwidths: 255/16, 270/16, 320/16, 340/32 nm. Mass detection operating parameters were as follows: dryer gas flow (nitrogen) 8 L/min, nitrogen temperature 230 °C, nebulizer pressure 1.6 bar.
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4

High-Resolution Mass Spectrometry Analysis

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Samples were analyzed by direct infusion mass spectrometry with a maXis hybrid quadrupole time-of-flight mass spectrometer (Bruker Daltonics, Billerica, MA, USA), a micrOTOF-Q hybrid quadrupole time-of-flight mass spectrometer (Bruker Daltonics, Billerica, MA, USA), an OrbiTrap Elite mass spectrometer (Thermo Scientific, USA), a Fourier transform ion cyclotron resonance mass spectrometer (Apex Ultra, Bruker Daltonics, USA), and with an IFunnel Q-ToF mass spectrometer 6550 (Agilent Technologies, USA) equipped with an electrospray ion sources. Details are described in the supplementary material [see Additional file 2]. The resultant metabolite ion masses were pooled and processed using Matlab version R2010a (MathWorks, Natick, MA, USA). This and all other calculations were performed using Matlab software.
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5

UPLC-MS Profiling of Metabolites

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Chromatographic separations were performed using[13 (link)] an Acquity UPLC system (Waters) equipped with a HSS T3 column (100- 1.0 mm, particle size 1.8 μm; Waters). The following elution binary gradient was used at a flow rate of 150 μL min-1:0–1 min, isocratic 95% A (water/formic acid, 99.9/0.1 v/v), 5% B (acetonitrile/formic acid, 99.9/0.1 v/v); 1–16 min, linear from 5–95% B; 16–18 min, isocratic 95% B; 18–20 min, isocratic 5% B. Eluted compounds were detected from m/z 100 to 1000 using a MicroTOF-Q hybrid quadrupole time-of-flight mass spectrometer (BrukerDaltonics) equipped with an Apollo-II electrospray ion source in negative ion modes using the following instrument settings: nebulizer gas, nitrogen, 1.6 bar; dry gas, nitrogen, 6 l min–1, 190-C; capillary, 5500 V (+4000 V); end plate offset, 500 V; funnel 1 RF, 200 Vpp.
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