The largest database of trusted experimental protocols

4 protocols using anti prdm16 antibody

1

Histological Analysis of Adipose Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Adipose tissues were fixed in 4% formaldehyde overnight. After paraffin embedding and sectioning at 5 µm, the sections were stained with hematoxylin and eosin (Beyotime) according to standard protocols. For immunohistochemistry, the sections were blocked with 5% BSA in PBS for 1 h, and incubated with anti‐PRDM16 antibody (R&D systems) at 4 °C overnight. The results were imaged with a light microscopy Motic BA600 (Motic Germany GmbH) and a slice scanner Pannoramic MIDI II (3DHISTECH). PRDM16‐Luc SVCs were differentiated into adipocytes and treated with DHT (1 µm, Meilunbio) or DMSO for 24 h. The adipocytes were washed with PBS, fixed in 4% formaldehyde for 10 min, permeabilized in PBST (PBS +0.1% TritonX‐100) for 10 min, blocked in 5% BSA for 30 min on ice, and incubated with Anti‐UCP1 antibody (Abcam) at 4 °C overnight. The 2nd day, after washing for three times, the adipocytes were incubated with fluorescently labeled goat anti‐rabbit IgG (Thermo Fisher Scientific) for 1 h, followed by incubation with BODIPY 493/503 (Thermo Fisher Scientific) plus Hoechst 33342 (Merck) for 20 min. Laser scanning microscopy 800 (ZEISS) with oil‐immersion objective lens was used for confocal imaging.
+ Open protocol
+ Expand
2

Comprehensive Adipogenesis Research Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
FBS (cat# 16000-044), TRIzol reagent (cat# 15596-018), DMEM/F-12
(cat# 11330-032), and DMEM (cat# 11965-092) were purchased from
Invitrogen (Carlsbad, CA, USA). SYBR-Green fluorescent dye (cat# 4368577)
and TaqMan miRNA probes were purchased from Applied Biosystems (Foster City, CA,
USA). Collagenase type II (cat# c6885), oligomycin (cat# 75351), FCCP
(cat# C2920), rotenone (cat# R8875), indomethacin (cat# I-7378),
dexamethasone (cat# D-1756), isobutylmethylxanthine (cat# I-5879),
rosiglitazone (cat# R-2408), T3 (cat# T-2877) and the MystiCq microRNA
qPCR Assay (cat# MIRRM02) were purchased from Sigma (Deisenhogfen,
Germany).
For western blotting, anti-UCP1 antibody (cat# 14670) was purchased from Cell
Signaling Technologies (Danvers, MA, USA), anti-PRDM16 antibody (cat#
AF6295) was purchased from R&D Systems (Tustin, CA, USA)21 (link),
the anti-GAPDH antibody (cat# sc-25778) was purchased from Santa Cruz
Biotechnology (Santa Cruz, CA, USA)38 (link). For immunohistochemistry,
anti-UCP1 antibody (cat# ab10983) was purchased from Abcam (Cambridge, MA,
USA)39 (link). The antibodies used for flow cytometry, including
anti-CD45 (cat# 103121), CD11b (cat# 101207), and F4/80 (cat#
123115)26 (link), were purchased from BioLegend (San Diego, CA,
USA).
+ Open protocol
+ Expand
3

Sumoylation and Ubiquitination Assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the sumoylation assay, HEK293 cells expressing HA-tagged SUMO2 (Addgene, 48967), UBC9 (Addgene, 20082), FLAG-tagged Prdm16, Cbx4, or vector were treated with 10 µM MG132 (Sigma, M7449) for 16 hr. After being immunoprecipitated with anti-HA antibody beads (HC-7) (Santa Cruz Biotechnology, sc-7392 AC), proteins were separated by SDS-PAGE, and an FLAG antibody (Sigma, F7425) was used for western blotting. For the ubiquitination assay, HEK293 cells expressing FLAG-tagged Ubiquitin, HA-tagged Prdm16, Cbx4, or vector were treated with 10 µM MG132 for 16 hr. After being immunoprecipitated with anti-FLAG M2 Affinity Gel (Sigma, A2220), proteins were separated by SDS-PAGE, and an HA antibody (Sigma, 12013819001) was used for western blotting.
For the sumoylation assay in brown adipocytes, preadipocytes were infected with HA-SUMO2 lentivirus and differentiated. The differentiated adipocytes were then infected with Cbx4 adenovirus and treated with 10 µM MG132 for 12 hr. After being immunoprecipitated with anti-HA beads, proteins were separated by SDS-PAGE, and anti-Prdm16 antibody (R&D Systems, AF6295) was used for western blotting.
+ Open protocol
+ Expand
4

Adipocyte and Macrophage Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The MystiCq microRNA qPCR Assay (cat#MIRRM02) and TRIzol reagent (cat#T9424) were purchased from Sigma (Deisenhogfen, Germany). RIPA buffer (cat#P0013B), protease, and phosphatase inhibitor cocktail (cat#P1048) were purchased from Beyotime (Shanghai, China). For western blotting, anti-PRDM16 antibody (cat#AF6295) was purchased from R&D Systems (Tustin, CA, USA), Anti-UCP1 antibody (cat#14670) was purchased from Cell Signaling Technologies (Danvers, MA, USA), and anti-α-tubulin (cat#sc-53646) was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). For flow cytometry, anti-CD11b (cat#101207), anti-CD45 (cat#103121), and anti-F4/80 (cat#123115) were purchased from BioLegend (San Diego, CA, USA). Anti-UCP1 used for immunohistochemistry was purchased from Abcam (Cambridge, MA, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!