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21 protocols using easysep mouse naive cd4 t cell isolation kit

1

Splenic cDC2 and OT-II Isolation

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Cell isolation from spleen was performed as above but FACS buffer without sodium azide was used for all functional and RNA profiling experiments. For sorting of cDC2 CD11c+ cells were enriched from splenic single-cell suspensions by positive selection using anti-CD11c magnetic beads and LS columns (Miltenyi) according to the manufacturer’s instructions. For OT-II cell isolation, the spleen was mechanically disrupted through a 70 µm strainer and washed once with FACS buffer without sodium azide. OT-II cells were then enriched from total splenocytes using the EasySep™ Mouse Naive CD4+ T Cell Isolation Kit (Stemcell Technologies) according to the manufacturer’s instructions. Erythrocytes were not lysed prior to OT-II cell enrichment, following the manufacturer’s recommendations.
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2

Lentiviral Transduction of Activated Mouse CD4+ T Cells

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On day 1, HEK293T cells were transfected with 1 μg of vector plus 0.5 μg of pCL-Eco plasmid (Naviaux et al., 1996 (link)) using X-tremeGene 9 DNA transfection reagent (Roche). On day 2, the media was exchanged with 1 ml fresh T cell media. CD4+ T cells were isolated from the spleens of B6 mice using an EasySep Mouse Naive CD4+ T cell isolation kit (Stemcell Technologies) and cultured in 96-well plates coated with anti-CD3 antibody (10 μg/ml; BD Biosciences) at a density of 1–2 × 106 cells per well in 0.1 ml of T cell media with soluble anti-CD28 antibody (10 μg/ml; BD Biosciences). On day 3, the activated T cells were transferred to 24-well plates at a density of 1–2 × 106 cells per well, washed, and then resuspended in virus-containing supernatants from the HEK293T cell cultures. Polybrene was added to a final concentration of 8 μg/ml. The cell–virus mixture was then centrifuged at 3,500 rpm for 90 min at 32°C to achieve transduction. Following transduction, cells were cultured in 96-well plates coated with anti-CD3 antibody (1 μg/ml) at a density of 5 × 105 cells per well in T cell media with soluble anti-CD28 antibody (1 μg/ml). On the following day, cells were washed and cultured in fresh 96-well plates in T cell media with IL-2 (20 ng/ml) until ready for further analysis.
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3

Mouse CD4 T Cell Activation Assay

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Mouse CD4 T cells were CD4 MACs-purified or purified using the EasySep Mouse naive CD4 T cell Isolation Kit (STEMCELL Technologies) from spleen and lymph nodes and cultured in TCM ± platebound anti-CD3 and anti-CD28 (0.5 µg/ml each) in a 96-well U-bottom plate. Cell-free supernatants were assessed for IL-2 cytokine production by standard sandwich ELISA using purified rat anti-mouse IL-2 capture antibody (JES6-1A12, BD) and biotin rat anti-mouse IL-2 detection antibody (JES6-5H4, BD; 2 µg/ml of each).
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4

Dendritic Cell-Mediated Activation of Naive CD4+ T Cells

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2 × 104/well of DCs were plated in 96 well round-bottom plates in RPMI (Thermo Scientific) supplemented with 10% FBS, 5 ng/ml GM-CSF and stimulated with either C. albicans or polystyrene beads overnight. The next day, DCs were pulsed with 500 nM Ova 323–339 peptide (Anaspec) for 2 h and then co-cultured with 2 × 105 of naïve Rag1−/− or Rag2−/− OT-II TCR transgenic CD4+ T cells for 3 days. Naïve CD4+ T cells were isolated from spleens and axillary, brachial, inguinal, and mesenteric lymph nodes from Rag−/− OT-II TCR transgenic mice and purified by using an EasySep mouse naive CD4+ T cell isolation kit (Stem Cell Technologies). For co-cultures with wild-type naïve CD4+ T cells, 1 ×106 DCs were plated in non-tissue culture treated 12-well-plates and stimulated with either yeast of hyphal form of C. albicans overnight. The next day, 2 ×104 of DCs were transferred to each well of 96 well round-bottom plates and pulsed with 500 nM Ova 323–339 peptide for 2 h and then co-cultured with 2 ×105 of wild-type naïve CD4+ T cells.
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5

Th17 Cell Polarization from Naive CD4+ T Cells

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Naive CD4+ T cells from WT mice were extracted by magnetic bead negative selection using the EasySep™ mouse naive CD4+ T cell isolation kit (Catalog # 19765, Stem Cell Technology, Vancouver, Canada). Extracted Naive CD4+ T cells were cultured in 10% FBS + RPMI 1640 medium with 100 U/mL of penicillin and streptomycin and induced in plates cultured with 2 mg/mL anti-CD3 (05112–25–100, Biogems, NJ, USA) and 2 mg/mL anti-CD28 (10312–25–100, Biogems). The conditions for Th17 cell polarization in vitro: IL-6 (10 ng/mL, 78052, Stem Cell Technology), TGF-β1 (5 ng/mL, 100-21C-10, PeproTech, NJ, USA), IL-23 (25 ng/mL, 200-23-10, PeproTech), IL-1β (10 ng/mL, 78035, Stem Cell Technology). After naive CD4+ T cells were stimulated, cells were collected, and Th17 cells were quantified by flow cytometry.
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6

Treg Suppression Assay Protocol

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Naive CD4+ T cells were purified from WT and RGC-32−/− spleen cells using an EasySep mouse naive CD4 T cell isolation kit (Stemcell Technologies). Cells were then cultured under Treg differentiating conditions for 72 h. Treg differentiation was tested by induction of Foxp3 by FACS analysis. CD4+CD25+ Tregs were purified using a mouse Treg isolation kit II (Stemcell Technologies). For the suppression assay, 5 × 104 purified CD4+CD25+ Tregs were cultured in triplicate with 5×104 or 2.5 ×104 purified CD4+CD252 T effectors (T responder) and 1 µg/ml anti-CD3 mAb in a 96-well round-bottom plate. T cell–depleted splenocytes from C57BL/6 mice (4×105) irradiated with 3000 Gy were used as APCs. Proliferation of the T responder cells was determined by [3H]thymidine incorporation. Percentage suppression of T responder proliferation was calculated using the formula: 100 × [(cpm of T responder cells alone 2 cpm of T responder cells cocultured with Tregs)/cpm of T responder cells alone].
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7

Isolation and Activation of Naive CD4 T Cells

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For human samples, naive CD4 T cells were isolated from previously frozen PBMCs using the EasySep Human Naive T cell isolation kit II (STEMCELL Technologies, Inc., Vancouver, Canada) according to the manufacturer’s instructions. Naive CD4 T cells were then stimulated with Dynabeads Human T-Activator CD3/CD28 (ThermoFisher Scientific) according to the recommended concentration for 2 to 3 days. Recombinant human IL-2 (Peprotech) was added at a final concentration of 100 IU/ml. For mouse samples, naive CD4 T cells were isolated from spleens and lymph nodes of standard laboratory diet- and WD-fed ApoE−/− mice using the EasySep Mouse Naive CD4 T cell isolation kit (STEMCELL Technologies, Inc.). Naive CD4 T cells were stimulated in αCD3-coated plates (2 μg/ml) and soluble αCD28 (1 μg/ml) was added to these wells for 2 days. All cells were cultured in RPMI with 10% FCS, L-glutamine, penicillin and streptomycin, and β-mercaptoethanol (for mouse cells). For the proliferation assays, isolated naive CD4 T cells were labeled with CTV (ThermoFisher) according to the manufacturer’s instructions, prior to stimulation. The percentage of cells divided was calculated using FlowJo v. 10.0.08 (Tree Star, Ashland, OR).
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8

Isolation and Activation of Murine Regulatory T Cells

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Dexmedetomidine (Sigma-Aldrich, SML0956); Dorsomorphin (Compound C) (Selleck, S7306); Cell Counting Kit8 (MCE, HY-K0301); Human lymphocyte separation solution (GE Healthcare, FICOLL-PAQUE PLUS, 17,144,003); EasySep™ Mouse Naive CD4+ T Cell Isolation Kit (Stem cell, 19,765); IL-2 (Peprotech, 212–12); TGF-β1 (Peprotech, 100–21); Anti-Mouse CD3 antibody (eBioscience, 16–0032-86), Anti-Mouse CD28 antibody (eBioscience, 16–0281-85); Anti-Mouse CD25 antibody (eBioscience, 16–0251-38); CD4 Monoclonal antibody (GK1.5), FITC (eBioscience, 11–0041-82); Rat IgG2b kappa Isotype Control (eB149/10H5), FITC (eBioscience, 11–4031-82); CD25 Monoclonal Antibody (PC61.5), PE-Cyanine7 (eBioscience, 25–0251-82); Rat IgG1 kappa Isotype Control (eBRG1), PE-Cyanine7 (eBioscience, 25–4301-82); HELIOS Monoclonal Antibody (22F6), PE (eBioscience, 12–9883-42); Armenian Hamster IgG Isotype Control (eBio299Arm), PE (eBioscience, 12–4888-81); FOXP3 Monoclonal Antibody (FJK-16 s), APC (eBioscience, 17–5773-82); Rat IgG2a kappa Isotype Control (eBR2a), APC (eBioscience, 17–4321-81). Since the antibodies used in immunohistochemistry, immunofluorescence, and western blotting experiments are not identical, information on these antibodies will be described in the corresponding methods section.
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9

Differentiation of Murine Regulatory T Cells

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Naïve mouse CD4+ T cells were isolated from spleens of 8–10 week-old B6.Cg-Foxp3tm2Tch/J (“FoxP3 eGFP”) reporter mice (Jackson Laboratories) using EasySep Mouse naive CD4+ T cell isolation kit (StemCell Technologies) following the manufacturer’s protocol. These mice co-express enhanced green fluorescent protein (eGFP), which is restricted to the T cell lineage, primarily to the CD4+ T cell population. Naïve CD4+ T cells were polarized to CD4+ FoxP3+ using 30 ng/ml human transforming growth factor beta (TGF-β) (eBioscience) in the presence of Dynabeads™ Mouse T-Activator CD3/CD28 (Thermo Fisher Scientific) with a 1:1 bead to cell ratio and 300 international units/ml (IU/ml) of recombinant human interleukin 2 (rhIL-2) (NIH, Bethesda, MD) for 5 days. Human TGF-β was used to polarize murine Tregs as mouse and human TGF-β share 99% sequence homology with high cross-species activity (39 (link), 40 (link)). Human IL-2 was used as human IL-2 efficiently stimulates mouse IL-2 receptor, whereas mouse IL-2 does not elicit efficient binding to human IL-2 receptors (41 (link), 42 (link)).
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10

Differentiation of Naive CD4+ T Cells

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Spleen cells were excised from mice and single-cell suspensions of splenocytes were prepared in RPMI 1640 by teasing the organ through a sterile nylon mesh. Naive CD4+ T cells were purified using an EasySep mouse naive CD4+ T cell isolation kit (Stemcell Technologies, Vancouver, BC, Canada) and cultured with plate-bound anti-CD3 (5 µg/ml; Bio X Cell), anti-CD28 (5 µg/ml; Bio X Cell), and cytokines used alone, including IL-12 (R&D Systems), IFN-γ (R&D Systems), IL-1 (R&D Systems), IL-4 (R&D Systems), IL-6 (Cell Signaling Technology), IL-23 (eBioscience), and TGF-β (Invitrogen), or in combination with Abs (Bio X Cell) for Th17-promoting (2.5 ng/ml TGF-β, 20 ng/ml IL-6, 10 µg/ml anti–IFN-γ, 10 µg/ml anti–IL-4, 10 µg/ml anti–IL-2), Th1-promoting (10 ng/ml IL-12, 5 µg/ml anti–IL-4), Th2-promoting (10 ng/ml IL-4, 5 µg/ml anti–IFN-γ), or regulatory T cell (Treg)–promoting (5 ng/ml TGF-β, 5 µg/ml anti–IFN-γ, 5 µg/ml anti–IL-4) conditions. In some experiments, naive CD4+ T cells were cultured in Th17-promoting conditions and IL-21 (20 ng/ml; eBioscience) or IL-23 (50 ng/ml) was added to cultures after 24 h. Cells were harvested after 48 h for real-time PCR analysis and after 72 h for cytokine expression by flow cytometry as previously described (23 (link)).
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