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8 protocols using irdye 800 labeled goat anti rabbit igg

1

Western Blot Analysis of Apoptosis Regulators

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Cells were lysed in M-PER buffer (Thermo Scientific) containing protease/phosphatase inhibitor cocktail (Roche). After assessing protein concentration by BCA assay (Pierce), equal amounts of protein for each sample were loaded into 4–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes, and immunoblotted with antibodies against Ikaros, Helios, cleaved Caspase-3, and Actin (Cell Signaling); and eRF3/GSPT1 (Abcam). Membranes were detected on an Odyssey detection system (LI-COR Biosciences) after incubation with IRDye®800-labeled goat anti-rabbit IgG and IRDye®680-labeled goat anti-mouse IgG (LI-COR) secondary antibodies.
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2

Protein Expression Analysis by Western Blot

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Cells were lysed in M-PER buffer (Thermo Scientific) containing protease/phosphatase inhibitor cocktail (Roche). Protein concentration was measured using a BCA assay (Pierce). Equivalent amounts of each sample were loaded on 4–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes, and immunoblotted with antibodies against CDK4, CDK6, β-catenin, active β-catenin, phospho-S536-p65, total p65, and Actin (Cell Signaling); pS172-NFAT2 (R&D); and NFAT2 (Invitrogen). IRDye®800-labeled goat anti-rabbit IgG and IRDye®680-labeled goat anti-mouse IgG (LI-COR) secondary antibodies were purchased for LI-COR, and membranes were detected on an Odyssey detection system (LI-COR Biosciences).
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3

Western Blot Analysis of Cellular Proteins

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Cells were lysed in RIPA buffer (Pierce) containing protease/phosphatase inhibitor cocktail (Thermo Scientific). Protein concentration was measured using a BCA assay (Pierce). Equivalent amounts of each sample were loaded on 4%–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes, and immunoblotted with antibodies directed against Npm1 (sc-271737, SantaCruz), Pgk1 (PA5–28612, ThermoFisher), Pdk2 (PA5–28612, ThermoFisher), VINC (4650s, CST), and β-actin (Ab8227, Abcam). IRDye 800-labeled goat anti-rabbit IgG and IRDye 680-labeled goat anti-mouse IgG secondary antibodies were purchased from LI-COR Biosciences, and membranes were subjected to an Odyssey detection system (LI-COR Biosciences).
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4

Western Blot Analysis of Apoptosis Regulators

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Cells were lysed in M-PER buffer (Thermo Scientific) containing protease/phosphatase inhibitor cocktail (Roche). After assessing protein concentration by BCA assay (Pierce), equal amounts of protein for each sample were loaded into 4–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes, and immunoblotted with antibodies against Ikaros, Helios, cleaved Caspase-3, and Actin (Cell Signaling); and eRF3/GSPT1 (Abcam). Membranes were detected on an Odyssey detection system (LI-COR Biosciences) after incubation with IRDye®800-labeled goat anti-rabbit IgG and IRDye®680-labeled goat anti-mouse IgG (LI-COR) secondary antibodies.
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5

Immunoblotting Analysis of Chromatin Regulators

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Cells were lysed in RIPA buffer (Pierce) containing protease/phosphatase inhibitor cocktail (Thermo Scientific). Protein concentration was measured using the BCA assay (Pierce). Equivalent amounts of each sample were loaded on 4%–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes, and immunoblotted with antibodies directed against Cas9 (MA1–202, ThermoFisher), Asf1a (2990s, Cell Signaling Technology), Asf1b (PA5–67639, Invitrogen), γH2AX (9718s, CST) and β-actin (Ab8227, Abcam). IRDye 800-labeled goat anti-rabbit IgG and IRDye 680-labeled goat anti-mouse IgG secondary antibodies were purchased from LI-COR Biosciences, and membranes were detected with an Odyssey detection system (LI-COR Biosciences).
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6

Sts-1 Western Blot Analysis

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For Sts-1 Western blot analysis, cells were lysed in M-PER buffer (Thermo Scientific) containing protease/phosphatase inhibitor cocktail (Roche). Protein concentration was measured using a BCA assay (Pierce). Equivalent amounts of each sample were loaded on 4–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes, and immunoblotted with antibodies against Sts-1 (Proteintech #19563–1-AP) and β-Actin (Cell Signaling #3700). IRDye®800-labeled goat anti-rabbit IgG and IRDye®680-labeled goat anti-mouse IgG (LI-COR) secondary antibodies were used and detected on an Odyssey CLxsystem.
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7

Sts-1 Western Blot Analysis

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For Sts-1 Western blot analysis, cells were lysed in M-PER buffer (Thermo Scientific) containing protease/phosphatase inhibitor cocktail (Roche). Protein concentration was measured using a BCA assay (Pierce). Equivalent amounts of each sample were loaded on 4–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes, and immunoblotted with antibodies against Sts-1 (Proteintech #19563–1-AP) and β-Actin (Cell Signaling #3700). IRDye®800-labeled goat anti-rabbit IgG and IRDye®680-labeled goat anti-mouse IgG (LI-COR) secondary antibodies were used and detected on an Odyssey CLxsystem.
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8

Western Blot Analysis of Protein Targets

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Cells were lysed in M-PER buffer (Thermo Scientific) containing protease and phosphatase inhibitor cocktail (Roche). Lysate concentrations were measured and normalized using a BCA assay (Pierce). Equal amounts of lysates were loaded onto 4–12% Bis-Tris gels (Invitrogen), transferred to nitrocellulose membranes (BioRad), and blocked with Intercept blocking buffer (LI-COR). Membranes were then incubated with primary antibodies against ERK5 (Cell Signaling, #3372S), AURKA (Cell Signaling, # 14475S), BRD4 (Fortis Life Sciences, # A301-985A-M), and Actin (Cell Signaling, # 3700S) overnight at 4 °C, followed by incubation with IRDye®800-labeled goat anti-rabbit IgG and IRDye®680-labeled goat anti-mouse IgG (LI-COR) secondary antibodies for detection on an Odyssey CLx System.
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