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Dulbecco s phosphate buffer saline pbs

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Dulbecco's Phosphate Buffer Saline (PBS) is a widely used buffer solution in biological research and laboratory applications. It is a balanced salt solution that maintains the pH and osmolarity of cell culture and biochemical experiments. PBS is a key component in various laboratory techniques, such as cell washing, dilution, and preservation.

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9 protocols using dulbecco s phosphate buffer saline pbs

1

Titanium Surface Sterilization and Cell Seeding

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To sterilize the titanium samples, they were autoclaved in water steams at 121 °C and a pressure of 1.5 atmospheres. Then, the samples were placed into the wells of 4-well plates (Nunc, USA). FetMSCs and MG-63 cells were seeded (1 × 105 in 20 µL of DMEM/F12 nutrient medium) on the surface of the samples and maintained for 24 h in CO2. After incubation, the cells were washed with Dulbecco’s phosphate buffer saline (PBS) (Sigma-Aldrich, Burlington, MA, USA) and fixed in 2.5% glutaraldehyde in phosphate buffer (pH = 7.2, Sigma-Aldrich, Burlington, MA, USA). After 3 days, the samples were washed in a phosphate buffer and successively dehydrated in 30, 50, 70, 90, 96% and absolute ethanol for 30 min each. The final drying was carried out 3 times for 15 min using Leica EM CPD300 at the CO2 critical point. Finally, the Au coatings with a thickness of about 10 nm were deposited with Leica EM SCD500. The evaluation of the cells’ morphology was performed using a Tescan MIRA3 LMU scanning electron microscope (TESCAN, Brno–Kohoutovice, Czech Republic).
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2

Liposome Preparation and Optical Analysis

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Liposomes were prepared using the ethanol injection method. Lipids were weighed and dissolved in absolute ethanol and subsequently injected into calcium-free Dulbecco’s phosphate buffer saline (PBS; Sigma-Aldrich) preheated to 65 °C reaching a final lipid concentration of 50 mM. The liposomes were extruded five times using a high-pressure Lipex extruder (Northern Lipids, Canada) through 400, 200, and 100 nm polycarbonate-etched membrane (Whatman, Newton, MA, USA) at 65 °C.
For the absorbance measurements, liposomes were diluted 50-fold and measured in a UV-star 96-well microplate (Greiner bio-one, Germany) using the Infinite 200PRO multimode reader (TECAN, Switzerland) controlled with the i-control 1.10 software. Based on the absorbance data, a Lorentzian function was fitted for each of the phospholipids using the curve fitting toolbox in Matlab (version 2021b). The Lorentzian function Eq. (2) is: L=a/((xb)2+c)+d Where the constants a, b, c, and d denote the Lorentzian amplitude, center, width, and offset respectively, and x denotes the Lorentzian variable - photon energy.
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3

MEA Electrode Characterization by EIS

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Electrochemical impedance spectroscopy (EIS) measurements were performed with a Novocontrol Technologies Alpha-A High Performance Frequency Analyzer (Novocontrol Technologies GmbH & Co. KG, Montabaur, Germany). Impedance spectra between 100 Hz and 10 MHz were recorded at 200 distinct frequencies in total, applying a sinusoidal voltage of 10 mV amplitude. For the MEA electrode characterization, EIS was performed in a three-electrode arrangement using one MEA electrode as a working electrode (WE), a platinum wire as a counter electrode (CE), and a commercial Silver/Silver-Chloride (Ag/AgCl) (Dri-Ref short, World Precision Instruments, Inc., Sarasota, FL, USA) electrode as reference electrode (RE). These measurements were carried out in Dulbecco’s phosphate buffer saline (PBS) (purchased from Sigma-Aldrich Chemie GmbH, Munich, Germany).
To identify the optimum AC frequency for the electroporation pulse, we determined the normalized impedance, which describes the contribution of the cell layer to the total impedance. Hereby, two EIS measurements were conducted: one without the cells and one after 24 h, when the cells completely adhered to the MEA. These measurements were performed in cell culture medium and all 60 electrodes of the MEA were short-circuited to reduce the total impedance of the WE.
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4

Collagen-Coated Dishes Enhance Myoblast Growth

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We tested different surface treatments: gold coating, standard (SPD) and type I collagen coated petri dishes (CCPD), and we observed that CCPDs lead to greater C2C12 myoblast lengths, widths and areas. In this study, we chose type I collagen for myoblast adhesion because this protein is one of the major insoluble fibrous protein found in the in vivo extracellular matrix (ECM). Type I collagen aqueous solution (3 mg/ml) from bovine skin and tendon BioReagent (Sigma Aldrich) was diluted in ultra-pure water to get 100 μg/ml. Petri dishes were incubated three hours with this solution (8 μg/cm2) at 37 °C to allow proteins to bind, dried overnight at RT under clean atmosphere and rinsed with Dulbecco’s Phosphate Buffer Saline (PBS, Sigma) before use.
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5

Evaluating Mitochondrial Potential in Sperm

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The lipophilic cationic dye 5,5′, 6,6′-tetrachloro-1,1′, 3,3′-tetraethylbenzimidazolyl carbocyanine iodide (JC-1)
was used for assessing mitochondrial membrane potential (14) . Sperm concentration was re-diluted with Dulbecco's Phosphate Buffer Saline (PBS; Sigma-Aldrich, USA) to a concentration of 1 x 10 6 sperm/mL, from where 288 μL were taken and dispensed in a cytometry tube preheated at 37 ºC. Then, each sample was stained with 12 μL de JC-1 (153 μM, T-3168; Thermo Fisher) and incubated for 10 min at 37 °C. Finally, 300 μL of PBS were added to the mix in order to obtain a concentration of 0.5 x 10 6 sperm/mL. Flow cytometry analysis was performed using 488 nm excitation with bandpass lters FL1 (525±30 nm) and FL2 (590±40 nm) for green and red emission, respectively. In healthy sperm, the dye is taken up by the mitochondria, where form aggregates that exhibit intense red/orange uorescence. In contrast, in dysfunctional (possibly apoptotic) sperm, due to alterations in the membrane potential, the dye remains as a monomer and the mitochondria appears uorescent green. Consequently, the mitochondrial potential was expressed as the percentage of red (ΔΨm High ) or green (ΔΨm Low ) over total (13, 15) .
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6

Gadolinium-Loaded Liposome Preparation

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Gd liposomes were prepared as described before.48 (link) Briefly, a lipid mixture of hydrogenated soybean phosphatidylcholine (HSPC; Avanti Polar Lipids, Alabaster, AL, USA), cholesterol (Sigma-Aldrich, Rehovot, Israel) and 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-methoxy-polyethylene glycol 2000 (DSPE-PEG2000; Avanti Polar Lipids, Alabaster, AL, USA), in molar percentages of 56:39:5 was dissolved in pure ethanol at 70°C. The lipid mixture was injected into a Dulbecco's Phosphate Buffer Saline (PBS; Sigma-Aldrich, St. Louis, USA)solution containing 167 mg/ml of Gd-DTPA Diethylenetriaminepentaacetic acid gadolinium(III) dihydrogen salt hydrate (Gd; Sigma-Aldrich, Rehovot, Israel) to obtain a final lipid concentration of 50 mM. The liposomes were downsized to 80 nm using a Lipex extruder (Northern Lipids, Vancouver, Canada) at 65°C through 400, 200, 100, 80 and 50 nm Nuclepore polycarbonate membranes (Whatman, Newton, MA, USA). Free Gd-DTPA was removed using dialysis in a 12-14 kDa membrane (Spectrum Laboratories, Inc., USA) against PBS (1:1000 volume ratio) at 4°C and exchanged three times. Average liposome size was measured using Zetasizer Nano ZSP (Malvern Instruments, UK) in disposable polystyrene cuvette after liposomes were diluted 1:100 in PBS and Cryo-TEM was performed as described previously.48 (link)
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7

Collagenase-Loaded Liposomal Delivery

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Collagenase type-I (Sigma-Aldrich, St. Louis, MO, USA) was encapsulated in 100-nm liposomes. A lipid mixture of 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC; Avanti Polar Lipids, Alabaster, AL, USA), cholesterol (Sigma-Aldrich) and 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-methoxy-polyethylene glycol 2000 (PEG-DSPE; Avanti), at three different molar ratios of: 95:0:5, 80:15:0 and 56:39:5, respectively, were dissolved in absolute ethanol. The lipid solution was added to calcium free Dulbecco's Phosphate Buffer Saline (PBS; Sigma-Aldrich) solution containing 2mg/ml collagenase to reach a lipid concentration of 50mM, at 50°C. The liposomes were downsized using a Lipex extruder (Northern Lipids, Vancouver, Canada) five times through each 400, 200 and 100-nm polycarbonate etched membrane (Whatman, Newton, MA, USA) at 40°C with a maximal working pressure of 10bar. The non-encapsulated protein was removed by dialysis using a 1000kDa cutoff membrane (Spectrum Labs, CA, USA) against PBS solution (1:1000 vol ratio); the external PBS was replaced after 1, 3 and 24 hours, at 4°C. Liposomes were sized using a Zetasizer NanoZSP (Malvern Instruments, Worcestershire, UK) using disposable polystyrene cuvettes after diluting the samples 1:100 in PBS.
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8

Quantifying Pancreatic Beta-Cell Mass and Proliferation

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Pancreata from WT and BKO mice fed two weeks on CD and HFD were dissected, fixed in 10% formalin neutral buffered solution and paraffin embedded. Three-micrometer-thick pancreatic sections from 3 different levels (>150 μm apart) for each pancreas were deparaffinized, rehydrated, boiled in citrated buffer (10 mM; pH = 6.0) only in case of Ki67 staining, permeabilized with 1% Triton X-100 (Sigma–Aldrich) in Dulbecco's phosphate buffer saline (PBS; Sigma–Aldrich) and blocked with 5% Donkey serum in PBS. Samples were incubated overnight with polyclonal guinea pig anti-insulin (1:500; Dako, Glostrup, Denmark) and mouse-anti glucagon (1:1000; Sigma–Aldrich) or rabbit anti-Ki67 (1:200; Thermo Fisher Scientific, Waltham, MA, USA). As secondary antibodies, Alexa Fluor 488 anti-guinea pig (1:250; Jackson I.R., Newmarket, UK), 555 anti-mouse (1:250; Invitrogen, Carlsbad, CA, USA) and 455 anti-rabbit (1:400, Dako) were used. Hoechst 33342 (Sigma Aldrich) was used to stain nuclei. Images were taken with Leica TCS SPE confocal microscope and the analysis performed using Fiji (ImageJ) version 2.1 [28 (link)]. Total β-cell mass was calculated by multiplying their fractional area per pancreas weight. The percentage of proliferating β-cells was calculated as the percentage (%) of Ki67-positive β-cells with respect to total β-cells.
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9

Evaluating Mitochondrial Potential in Sperm

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The lipophilic cationic dye 5,5′, 6,6′-tetrachloro-1,1′, 3,3′-tetraethylbenzimidazolyl carbocyanine iodide (JC-1)
was used for assessing mitochondrial membrane potential (14) . Sperm concentration was re-diluted with Dulbecco's Phosphate Buffer Saline (PBS; Sigma-Aldrich, USA) to a concentration of 1 x 10 6 sperm/mL, from where 288 μL were taken and dispensed in a cytometry tube preheated at 37 ºC. Then, each sample was stained with 12 μL de JC-1 (153 μM, T-3168; Thermo Fisher) and incubated for 10 min at 37 °C. Finally, 300 μL of PBS were added to the mix in order to obtain a concentration of 0.5 x 10 6 sperm/mL. Flow cytometry analysis was performed using 488 nm excitation with bandpass lters FL1 (525±30 nm) and FL2 (590±40 nm) for green and red emission, respectively. In healthy sperm, the dye is taken up by the mitochondria, where form aggregates that exhibit intense red/orange uorescence. In contrast, in dysfunctional (possibly apoptotic) sperm, due to alterations in the membrane potential, the dye remains as a monomer and the mitochondria appears uorescent green. Consequently, the mitochondrial potential was expressed as the percentage of red (ΔΨm High ) or green (ΔΨm Low ) over total (13, 15) .
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