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Apoptag peroxidase kit

Manufactured by Merck Group
Sourced in United States

The ApopTag-peroxidase kit is a laboratory tool designed for the detection and quantification of apoptosis in tissue samples. It utilizes a terminal deoxynucleotidyl transferase (TdT) enzyme to incorporate modified nucleotides at the DNA breaks associated with apoptosis, which are then detected using a peroxidase-conjugated antibody. This kit provides a reliable and sensitive method for the assessment of programmed cell death in various biological systems.

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23 protocols using apoptag peroxidase kit

1

Evaluating Germ Cell Apoptosis in Testis

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Assessing of apoptotic germ cell was performed in testicular sections by the terminal deoxynucleotidyl transferase (TdT)-mediated deoxy-UTP nick end labeling (TUNEL) technique [29 (link)] using an ApopTag-peroxidase kit (Chemicon International, Inc., Temecula, CA). Enumeration of the apoptotic germ cell population and Sertoli cell nuclei with distinct nucleoli was quantified at stages I-IV (early stages), stages VII-VIII (middle stages), and stages XI-XII (late stages) of the seminiferous epithelial cycle by using an Olympus BH-2 microscope (New Hyde Park, NY). Stages were identified according to the criteria proposed by Russell et al for paraffin sections [30 (link)]. The rate of germ cell apoptosis was expressed as the number of apoptotic germ cells per Sertoli cell (apoptotic index, AI) [29 (link)].
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2

Evaluating CRT0066101 in Xenograft Tumor Model

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All animal experiments were approved by the Institutional Animal Care and Use Committee of the University of Pittsburgh. HCT116 cells (<70% confluent) were harvested, and 5×106 cells in 0.1 mL of medium were implanted subcutaneously on the back of athymic nude female mice. When the tumor size reached approximately 100 mm3, mice were randomized into the following groups (5 mice per group): (A) control (vehicle; 5% dextrose); (B) 40 mg/kg, (C) 80 mg/kg and (D) 120 mg/kg CRT0066101 (dissolved in 5% dextrose) administered orally once daily. Therapy was administered for 3 weeks, and animals were sacrificed on day 21 after treatment with CRT0066101. Tumor volume was measured as V = 1/2ab2, in which “a” and “b” represents length and width of tumor (22 (link)). Tumor volumes were monitored 3 times per week. At the time the animals were euthanized, half of the tumor tissue was fixed with formalin and paraffin-embedded for immunohistochemistry. The other half was snap-frozen in liquid nitrogen and stored at −80°C. Tissue slides were processed by the Department of Pathology Development Laboratory and the Tissue and Research Pathology Services at the University of Pittsburgh for Ki-67 (#9027; Cell Signaling), in situ TUNEL staining (APOPTAG Peroxidase kit; Chemicon), p-ERK (#4370; Cell Signaling), and M30 (#12140322001; Roche).
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3

In Situ Detection of Apoptotic Cells in Liver

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In situ detection of cells with DNA strand breaks was performed in formalin-fixed, paraffin-embedded liver sections by the terminal deoxynucleotidyl transferase (TdT)-mediated deoxy-UTP nick end labeling (TUNEL) technique [17 (link), 25 (link)] using an ApopTag-peroxidase kit (Chemicon International, Inc., San Francisco, CA, USA). The rate of hepatocellular apoptosis was expressed as the percentage of the TUNEL-positive apoptotic nuclei per total (apoptotic plus non-apoptotic) nuclei present within a reference area of 62,500 μm2 [17 (link), 25 (link)].
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4

TUNEL Assay for Muscle Cell Apoptosis

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In situ detection of cells with DNA strand breaks was performed on paraformaldehyde-fixed, paraffin-embedded muscle sections by the terminal deoxynucleotidyltransferase-mediated deoxyuridine triphosphate nick end labeling (TUNEL) technique, using an ApopTag-peroxidase kit (Chemicon International, Inc., San Francisco, CA) [37 (link),43 (link)]. Counting of terminal deoxynucleotidyltransferase-mediated deoxyuridine triphosphate (DNT-DUT) nick end labeling-positive nuclei was carried out using an American Optical Microscope with a 40X objective and a pair of 10X eyepieces. A square grid fitted within one eyepiece provided a reference of 62,500 μm2. The rate of muscle cell apoptosis was expressed as the percentage of the terminal (DNT-DUT) nick end labeling-positive apoptotic nuclei per total nuclei (apoptotic plus nonapoptotic) present within the reference area.
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5

Quantification of Germ Cell Apoptosis

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Detection of apoptotic cell was performed in Bouin’s’-fixed, paraffin-embedded testicular sections by the terminal deoxynucleotidyl transferase (TdT)-mediated deoxy-UTP nick end labeling (TUNEL) technique [37 (link)] using an ApopTag-peroxidase kit (Chemicon International, Inc., Temecula, CA). Enumeration of the Sertoli cell nuclei with distinct nucleoli and apoptotic germ cell population was quantified at stages I–IV (early stages), stages VII–VIII (middle stages) and stages XI–XII (late stages) of the seminiferous epithelial cycle using an Olympus BH-2 microscope (New Hyde Park, NY). Stages were identified according to the criteria proposed by Russell et al for paraffin sections [38 (link)]. The rate of germ cell apoptosis (apoptotic index, AI) was expressed as the number of apoptotic germ cells per Sertoli cells [37 (link)].
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6

Quantifying Cardiomyocyte Apoptosis via TUNEL

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Visualization of apoptotic CMs was achieved in formalin-fixed, paraffin-embedded ventricular sections by the TUNEL technique (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)) using an ApopTag-peroxidase kit (Chemicon International, Inc., San Francisco, CA). Slides were counterstained with methyl green for detection of non-apoptotic nuclei. We also performed TEM to confirm the apoptotic nature of the cell death and the identity of the dying cardiomyocytes (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)). Quantitation of CM nuclei (both apoptotic and non-apoptotic) was carried out using an unbiased 2-dimension rule (Cruz-Orive and Weibel, 1990 ) as described previously (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)). For each ventricle at least 10 grid fields were examined. The rate of CM apoptosis was expressed as the percentage of the TUNEL-positive apoptotic nuclei per total nuclei (apoptotic plus non apoptotic) present within the reference area (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)).
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7

Assessment of Apoptosis in Intestinal Tissue

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Propidium iodide (PI; 10 mg/mL; Sigma) was diluted in 0.9% NaCl and 0.2 mg/kg was administered 2 h before killing by intraperitoneal injection in a total volume of not more than 100 μL. TBI mice were killed at 2 d after 9.25 Gy. The Ilea from control and TBI mice were fixed in 2% paraformaldehyde for 1 hour, cryoprotected in 30% sucrose in PBS overnight and then shock frozen in liquid nitrogen cooled isopentane. 7 micron cryostat section were cut and mounted on superfrost slides (Fisher). TUNEL (Terminal deoxynucleotidyl transferase mediated dUPT nick end labeling) staining was conducted as described [26 (link)]. In brief, TUNEL staining was conducted with the ApopTag Peroxidase Kit or ApopTag Fluorescein In Situ Apoptosis Detection Kit (Cat# S7101 or S7110, Chemicon International, Temecula, CA). Sections were then counterstained with Dapi and were mounted directly in Gelvatol and coverslipped. Imaging was with a Nikon A1 confocal microscope with a 20x 0.75 NA objective. Three channels were imaged using 405nm (Dapi) 488nm (TUNEL) and 561nm (PI) lasers. Imaging of each channel was sequential to avoid channel bleed through. To derive an overview of labelling a motorized scanning stage was use to collect several images which were stitched using NIS Elements.
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8

Quantifying Cardiomyocyte Apoptosis via TUNEL

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Visualization of apoptotic cardiomyocyte was achieved in formalin-fixed, paraffin-embedded ventricular sections by the TUNEL technique [15 (link), 24 (link)] using an ApopTag-peroxidase kit (Chemicon International, Inc., San Francisco, CA). Slides were counterstained with methyl green for detection of non-apoptotic nuclei. Enumeration of CM nuclei (both apoptotic and non-apoptotic) was determined within a reference area using an unbiased 2-dimension rule [28 (link)] as described previously [12 (link), 24 (link)]. For each mouse, at least 50 grid fields were counted. The rate of apoptosis was expressed as the percentage of the TUNEL-positive nuclei per total nuclei (apoptotic and non-apoptotic) present within the reference area [12 (link), 24 (link)].
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9

Quantifying Cardiomyocyte Apoptosis via TUNEL

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Visualization of apoptotic CMs was achieved in formalin-fixed, paraffin-embedded ventricular sections by the TUNEL technique (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)) using an ApopTag-peroxidase kit (Chemicon International, Inc., San Francisco, CA). Slides were counterstained with methyl green for detection of non-apoptotic nuclei. We also performed TEM to confirm the apoptotic nature of the cell death and the identity of the dying cardiomyocytes (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)). Quantitation of CM nuclei (both apoptotic and non-apoptotic) was carried out using an unbiased 2-dimension rule (Cruz-Orive and Weibel, 1990 ) as described previously (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)). For each ventricle at least 10 grid fields were examined. The rate of CM apoptosis was expressed as the percentage of the TUNEL-positive apoptotic nuclei per total nuclei (apoptotic plus non apoptotic) present within the reference area (Sinha-Hikim et al., 2017 (link); Sinha-Hikim et al., 2011a (link)).
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10

TUNEL Assay for Muscle Cell Apoptosis

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In situ detection of cells with DNA strand breaks was performed on paraformaldehyde-fixed, paraffin-embedded muscle sections by the terminal deoxynucleotidyltransferase-mediated deoxyuridine triphosphate nick end labeling (TUNEL) technique, using an ApopTag-peroxidase kit (Chemicon International, Inc., San Francisco, CA) [37 (link),43 (link)]. Counting of terminal deoxynucleotidyltransferase-mediated deoxyuridine triphosphate (DNT-DUT) nick end labeling-positive nuclei was carried out using an American Optical Microscope with a 40X objective and a pair of 10X eyepieces. A square grid fitted within one eyepiece provided a reference of 62,500 μm2. The rate of muscle cell apoptosis was expressed as the percentage of the terminal (DNT-DUT) nick end labeling-positive apoptotic nuclei per total nuclei (apoptotic plus nonapoptotic) present within the reference area.
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