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Aktaprime plus chromatography system

Manufactured by GE Healthcare
Sourced in Sweden, Brazil

The AKTAprime plus is a chromatography system designed for protein purification and separation. It is capable of performing various chromatographic techniques, including ion exchange, size exclusion, and affinity chromatography. The system features automated operation, real-time monitoring, and data collection capabilities to support the purification process.

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6 protocols using aktaprime plus chromatography system

1

Endosperm Protein Fractionation and Analysis

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A 700mg aliquot of endosperm was extracted in 1ml of gel filtration buffer containing 10mM HEPES-KOH, pH 7.5, 100mM NaCl, 10 μl ml–1 plant protease inhibitor cocktail (Sigma) and centrifuged at 20 000 g for 10min. The supernatant was filtered through 0.45 μm cellulose acetate to remove large particles and injected into a 500 μl sample loop, prior to fractionation by gel permeation chromatography (GPC) using Superdex 200 resin packed in a 10/300 column connected to an AKTAprime plus chromatography system (GE Healthcare) at 4 °C. The column was equilibrated with 10mM HEPES-KOH, pH 7.5, 100mM NaCl, and fractions eluted at 1ml min–1. Fractions of 2ml were collected and concentrated 25-fold using an Amicon Ultra 50K centrifugal filter unit (Merck Millipore) following the manufacturer’s instructions. Concentrated samples were mixed with one-third volume of native-PAGE sample buffer (0.625M TRIS-HCl, pH 7.0, 50% glycerol, 0.2% bromophenol blue). A 7.5 μl aliquot was applied per lane to the native (non-denaturing) PAGE (see next section). The residual samples were further supplemented with one-third volume of SDS–PAGE sample buffer (0.1M TRIS-HCl, pH 6.8, 10% SDS, 12% β-mercaptoethanol, 20% glycerol, 0.2% bromophenol blue), boiled, and 5 μl per lane subjected to 7.5% acrylamide SDS–PAGE (height 6cm, width 8.5cm, and thickness 1mm) at 25 mA, and western blotting.
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2

Purification of BmooMPα-I Metalloproteinase

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A 50 mg sample of the B.moojeni venom was used to purify the metalloproteinase BmooMPα-I. The sample was resuspended in 1 mL of 50 mM ammonium bicarbonate buffer pH 8.0. The mixture was centrifuged at 13,000× g for 5 min, and then the supernatant was applied to a CM-SEPHAROSE FF column. The run was performed in the Akta Prime Plus Chromatography system (GE, Uppsala, Sweden) using a gradient (0–100%) of ammonium bicarbonate 500 mM pH 8.0 at a flow of 1 mL/min. The elution was monitored at 280 nm, and the fractions containing the BmooMPα-I were manually collected, lyophilized, and stored at −70 °C.
The isolated fraction, obtained by ion-exchange chromatography, was reconstituted in 0.1% Trichloroacetic acid. The mixture was applied to a C-18 column (Supelco). The reverse-phase chromatography was performed under a concentration gradient (0–70%) of acetonitrile 99.9% at a 1 mL/min flow in the Akta Prime Plus Chromatography system. Elution was monitored at 280 nm, and fractions were manually collected
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3

Extraction and Purification of Purple Corn Anthocyanins

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Purple corn pericarp was extracted using a dry milling procedure [35 ]. An ASE 300 Accelerated Solvent Extraction System (Thermo Scientific) was used to extract anthocyanin from purple corn pericarp, using only water as solvent. Corn pericarp (about 10 g) was added to a stainless steel cell with cellulose filter. The cell was preheated for 5 min and heated up to 50°C for extraction; static solvent extraction time was 5 min. The pressure in the cell during extraction was 1500 psi. The amount of water to flush through the cell following the static heating step was 100% of the cell volume. Extraction cycle to perform the static heating and flushing steps was five times. Cells were purged with nitrogen for 60 s at the end of the extraction. After freeze-drying, the extracts were passed through a Sephadex® LH-20 resin column (25 x 1.7 cm) using only water as eluent in an AKTAprime plus chromatography system (GE Healthcare, Milwaukee, WI). The volume of the water extracts was reduced by 60% in a rotational evaporator, freeze-dried, and kept at -20°C until further use. The resulting powder was called purple corn anthocyanin-rich water extract (PCW).
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4

Production and Purification of Recombinant Kunitz Domain Proteins

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The recombinant protein rSmKI-1 and its fragments, Kunitz (KI) domain (N-terminal Arg22–Thr82) and C-terminal tail (C-terminal Gli79–Glu146), were produced as previously described (10 (link)). Briefly, plasmids containing the sequence for rSmKI-1 or KI-domain or C-terminal tail from SmKI-1 were transformed into E. coli Rosetta™ (Merck KGaA, Darmstadt, Germany) competent cells. Cells transformed were cultured in selective medium and gene expression was induced by 1 mM isopropylthiogalactoside (IPTG). After induction, the bacterial cells were harvested and recombinant proteins were recovered as inclusion bodies and solubilized. Each protein was purified by affinity chromatography on a Ni-Sepharose column (Hitrap chelating 5 mL) using an AKTA prime Plus chromatography system (GE Healthcare, São Paulo, Brazil) according to the manufacturer’s protocol. Fractions containing proteins used in this study were determined through SDS/PAGE-20% and then, dialyzed against PBS pH 7.0. The recombinant proteins were quantified using the BCA kit (Pierce, Waltham, MA, USA). To evaluate the amount of endotoxin present, the samples were submitted to Limulus Amebocyte Lysate QCL-1000™ (Lonza) assay. Protein samples show less than 1 endotoxin unit (EU)/mg.
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5

Purification of Soluble Seed Proteins

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Soluble proteins were extracted from 700 mg of de-hulled developing seeds using 1.5 volumes of a buffer containing 10 mM Hepes-KOH (pH 7.5), 100 mM NaCl, and 10 μL/mL protease inhibitor (Sigma), as described previously (Crofts et al., 2015 (link)). After centrifugation, supernatants were filtered through a 0.45-μm syringe filter and 500 μL was loaded onto Superdex 200 gel filtration chromatography column (Φ16 mm × 410 mm) connected to an AKTAprime plus chromatography system (GE Healthcare), at 1 mL/min with 10 mM Hepes-KOH (pH 7.5), 100 mM NaCl. Then, 2-mL fractions were collected and concentrated to 80 μL using Amicon Ultra cartridges with 30-kDa cut-off (Merck). Concentrated fractions were supplemented with 40 μL of 3× native polyacrylamide gel electrophoresis (PAGE) sample buffer containing 0.625 M Tris-HCl (pH 7.0), 0.2% bromophenol blue, and 50% glycerol, or 3× sodium dodecyl sulfate (SDS) PAGE sample buffer containing 0.1 M Tris-HCl (pH 6.8), 10% SDS, 12% β-mercaptoethanol, 0.2% bromophenol blue, and 20% glycerol. Gel filtration experiments were performed at least twice and reproducible results were obtained. One representative result of western blot or native-PAGE gel is shown.
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6

Purification and Characterization of Purple Corn Anthocyanins

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After ANC processing, the extract from purple corn was passed through an Amberlite® XAD7HP resin column in an AKTA prime plus chromatography system (GE Healthcare, Milwaukee, WI) eluting with 30% aqueous ethanol. Different fractions were collected from the 280 nm chromatogram. They were analyzed using previously reported conditions [36 (link)] in a Hitachi HPLC System (Hitachi High Technologies America, Inc., Schaumburg IL) equipped with a diode array multi-wavelength detector. A Grace Prevail C18 (5 μm, 250 × 4.6 mm, Columbia, MD) column was used to compare with pure standards. The resulting fractions were called semi-purified cyanidin-3-O-glucoside from purple corn (C3G-P), and semi-purified condensed forms from purple corn (CF-P). C3G-P and CF-P were analyzed by tandem mass spectrometry using conditions previously described [36 (link)] on a Waters quadrupole time-of-flight (Q-Tof) Ultima equipped with an electrospray ionization (ESI) interface and controlled by MassLynx V4.1 software (Waters Corp., Milford, MA, USA). A Sunfire® C18 column (150 mm × 2.10 mm, 3.5 μm, Waters Corp., Milford, MA, USA) was utilized for separation. According to the MS2 analysis, the molecular mass of the condensed forms was 899 g/mol. Such mass value was used to calculate the concentration of CF-P in molarity units.
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