The largest database of trusted experimental protocols

Pierce radioimmunoprecipitation assay ripa buffer

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Pierce radioimmunoprecipitation assay (RIPA) buffer is a detergent-based cell lysis and protein extraction buffer. It is designed to solubilize proteins from cells and tissues for further analysis.

Automatically generated - may contain errors

7 protocols using pierce radioimmunoprecipitation assay ripa buffer

1

Western Blot Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples were lysed on ice in Pierce radioimmunoprecipitation assay (RIPA) buffer (Thermo, 89900) containing complete EDTA-free protease inhibitor cocktail (Sigma/Roche, 11836170001) and debris was pelleted. Protein content was determined using Pierce Micro bicinchoninic acid (BCA) Protein Assay kit (Thermo, 23235). Samples were prepared in 4x loading dye (Bio-Rad Laboratories, Hercules, CA), boiled at 95°C for 5 min, and loaded in 4%-15% gradient Mini-Protean TGX Stain-Free precast gels (Bio-Rad). Gels were run at 175V and transferred to a 0.2-μm-pore-size nitrocellulose membrane by the semidry transfer method. Blots were blocked in 1% casein buffer/Tris-buffered saline (TBS) for 3 hours at 4°C. Primary antibodies were diluted in 1% casein and incubated overnight at 4°C. Blots were washed three times with TBS with 0.01% Tween 20 (TBST) and incubated with secondary antibody diluted in TBST for 1 hour at room temperature. Horseradish peroxidase secondary antibodies were diluted 1:10,000. Blots were washed three times with TBST and then incubated with ClarityMax according to manufacturer’s recommendation (Bio-Rad, 1075062) for HRP secondary antibodies. Blots were imaged on a ChemiDoc MP imaging system.
+ Open protocol
+ Expand
2

Syk Protein Detection in Neutrophils

Check if the same lab product or an alternative is used in the 5 most similar protocols
Neutrophils were lysed in Pierce radioimmunoprecipitation assay (RIPA) buffer (Thermo Fisher Scientific) containing protease inhibitors (cOmplete Mini; Roche Diagnostics, Indianapolis, IN) and sodium orthovanadate (New England BioLabs, Ipswich, MA). Proteins were resolved by SDS-PAGE under reduced conditions and transferred onto a polyvinylidene difluoride (PVDF) membrane. Membranes were blocked in Tris-buffered saline–1% Tween (TBS-T)–5% nonfat milk. Total Syk protein was detected with rabbit MAb D3Z1E anti-Syk (Cell Signaling, Danvers, MA) (1:1,000). The blots were subsequently reacted with mouse MAb AC-15 anti-β-actin (Sigma, St, Louis, MO) (1:200,000) to verify equivalent loading levels.
+ Open protocol
+ Expand
3

Western Blot Analysis of Protein Lysates

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed with phosphate-buffered saline (PBS) and then lysed by sonication in Pierce radioimmunoprecipitation assay (RIPA) buffer (Thermo Fisher Scientific) containing cOmplete protease inhibitor cocktail (Sigma-Aldrich, St. Louis, MO). Aliquots of the cell lysates were mixed with sodium dodecyl sulfate (SDS) sample buffer for 5 min on ice. Polypeptides in the samples were separated by SDS-polyacrylamide gel electrophoresis (PAGE) using 5% to 20% gradient SDS-PAGE gels (Fujifilm Wako Pure Chemical, Osaka, Japan) and electroblotted onto polyvinylidene difluoride membranes (Millipore, Bedford, MA). After blocking with SuperBlock (Tris-buffered saline) blocking buffer (Thermo Fisher Scientific), the membranes were incubated overnight at 4°C with primary antibodies diluted in Can Get Signal immunoreaction enhancer solution 1 (Toyobo, Osaka, Japan). The membranes were then washed three times with PBS containing 0.05% Tween 20 (PBS-T) and incubated with horseradish peroxidase-conjugated secondary antibody diluted in Can Get Signal immunoreaction enhancer solution 2 (Toyobo) for 2 h at room temperature. After washing, the membranes were treated with SuperSignal West Femto maximum sensitivity substrate (Thermo Fisher Scientific), and the chemiluminescent signals on the membranes were detected using a ChemiDoc Touch imaging system (Bio-Rad Laboratories, Hercules, CA).
+ Open protocol
+ Expand
4

Cas9 Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
HEK293T cells expressing Cas9 transiently with or without ASV treatment were harvested and lysed in Pierce radioimmunoprecipitation assay (RIPA) buffer (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 1× HALT protease inhibitor cocktail (Thermo Fisher Scientific) and 5 mM EDTA. Protein concentrations were determined using a Pierce bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific). Approximately 20 μg of protein lysate was separated on a NuPAGE 4%–12% Bis-Tris gel (Invitrogen, Carlsbad, CA, USA) with 1× NuPAGE SDS running buffer, transferred to polyvinylidene fluoride (PVDF) membranes (Bio-Rad, Hercules, CA, USA), and blotted with a mouse anti-GAPDH antibody (1:2,000, GeneTex, Irvine, CA, USA) or a mouse anti-Cas9 antibody (1:1,000, Novus Biologicals, Littleton, CO, USA). After washing, the membranes were incubated in horseradish peroxidase-conjugated anti-mouse immunoglobulin G (IgG; 1:5,000, Thermo Fisher Scientific) at room temperature for 1 h, followed by exposure to enhanced chemiluminescence (ECL) substrate (Thermo Fisher Scientific). Membranes were visualized using a ChemiDoc imaging system (Bio-Rad).
+ Open protocol
+ Expand
5

Western Blot Analysis of Protein Complexes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in Pierce radioimmunoprecipitation assay (RIPA) buffer (Thermo Scientific, USA) supplemented with 50 mM NaF, 1 mM Na3VO4, 1× complete protease cocktail inhibitor (Roche, USA), and 0.2% SDS. The whole-cell lysates were sonicated for 1 min at high intensity and then denatured at 95°C for 5 min. Equal amounts of proteins were loaded onto an SDS-PAGE gel for separation. The specific primary antibodies used for immunoblot were anti-GAPDH (mouse; Sigma, USA), anti-CUL4B (mouse; Sigma, USA), anti-DDB1 (rabbit; Sigma, USA), anti-Flag (mouse; Sigma, USA), anti-HA (mouse; Sigma, USA), anti-DCAF13 (rabbit; Sigma, USA), and anti-PTEN (mouse; Abcam, USA). The western blot signals were recorded using a ChemiDoc MP instrument (Bio-Rad, USA). The images represent three independent replicates.
+ Open protocol
+ Expand
6

Quantifying L-Arg and Arginase I in Wound Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse l-Arg and arginase I concentrations were measured in tissue homogenates via commercially available enzyme-linked immunosorbent assay (ELISA) kits (MBS2600680 and MBS745422; MyBioSource) as per the manufacturer’s instructions. Briefly, approximately 100 mg of tissue was resected from the center of the wound in burned mice at 24 h postinsult (with or without infection) or from the center of the dorsum in noninjured mice. Tissue samples were placed into Precellys 2.8-mm steel bead kit (Peqlab) homogenizing tubes filled with 1 ml Pierce radioimmunoprecipitation assay (RIPA) buffer (Thermo Fisher Scientific) and then processed using a dedicated tissue homogenizer (Bertin Technologies). Homogenates were centrifuged, and the supernatants were collected from each sample. Aliquots of supernatants were then transferred to ELISA plates to measure l-Arg and arginase. Concentrations are normalized to the amount of tissue.
+ Open protocol
+ Expand
7

Western Blot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
The whole cell
lysate was harvested in Pierce radioimmunoprecipitation assay (RIPA)
buffer (ThermoScientific) containing protease and phosphatase inhibitor
cocktails. Protein concentration was measured using the detergent
compatible (DC) protein assay (Bio-Rad). Denatured lysates were separated
on NuPage 4–12% Bis-Tris Midi Protein gels (Novex) and transferred
to 0.45 μm polyvinylidene difluoride membrane (Immobilon) using
a TransBlot Turbo dry transfer machine (Bio-Rad). The membrane was
incubated in blocking buffer (5% non-fat dry milk, Tris-buffered saline
with 0.1% Tween-20) for 1 h at room temperature. The membrane was
then incubated with primary antibody for 1 h at room temperature,
followed by overnight incubation at 4 °C. Chemiluminescent detection
using ECL Prime (Amersham) and signal were visualized by an Odyssey
imaging system (Li-Cor). Primary antibodies were PIKfyve (R&D,
AF7885), LC3A/B (CST, 12741S), GAPDH (CST, 3683S), and vinculin (CST,
18799S). All antibodies were used at dilutions suggested by the manufacturers.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!