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32 protocols using cxcl9

1

Transwell Migration Assay for Treg Cells

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For migration studies, 5 × 105 purified CD4+ T cells in complete RPMI 1640 medium were added to the top chambers of a 96 well Transwell plate with a pore size of 5 μm (Corning Costar, Acton, MA). Mouse recombinant chemokines CXCL9, CXCL10, CXCL11, and CCL21 (Peprotech, Rocky Hill, NJ) were diluted in complete RPMI 1640 medium and added to the bottom chamber of the Transwell plate to a final concentration of 200 μM for CXCL9 and CXCL11 and 100 μM for CXCL10 and CCL21. As a control, complete RPMI 1640 medium alone was added to the bottom chamber. After incubation for 4 h at 37°C in 5% CO2, the cells were collected from the bottom chamber and counted in a hemocytometer. The chemotaxis index was calculated by dividing the number of cells that migrated in response to chemokines by the number of cells in the bottom chamber containing medium alone.
To identify the population of cells that had migrated to each chemokine, cells were collected from individual bottom chambers and surface stained with FITC-conjugated CD4 mAb followed by intracellular staining with APC-conjugated Foxp3 mAb as previously described. Cells were analyzed by FACS and the percentage of CD4+Foxp3+ Tregs in the migrated cell population was determined.
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2

Activating Skin TRM Cells In Situ

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Skin TRM in VacV-immunized hosts were activated in situ with 50μg transdermal injection of indicated peptides at the immunization site as described [34 (link)]. Single cells suspension from the ears is obtained 6 hours later and stained for surface and intracellular antigens/cytokines in the absence of BFA. When stated, 3μg of CXCL9 and CXCL10 (Peprotech) was added to the site of peptide injection as previously described [64 (link)].
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3

Chemokine-Induced Migration of Mesenchymal Stem Cells

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We assessed the influence of chemokines on cell migration of MSCs using the CytoSelectTM 96-well cell migration assay (Cell Biolabs), according to the manufacturer’s instructions44 (link)–46 (link). Feeder tray wells were filled with 150 µl of medium in the presence of seven chemokines (CCL19, CCL21, CCL25, CXCL9, CXCL10, CXCL11, and CXCL12; Peprotech; all chemokines were used at a concentration of 100 ng/ml). Migration assays were run for 8 h at 37 °C in a 5% CO2 incubator. The cells were treated with a fluorescent dye (CyQuant®) and measured at 480 nm using a SpectraMax M2 Plate Reader (Molecular Devices).
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4

Multiplex Cytokine Profiling of CBMC Supernatants

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Mediator production in cell‐free CBMC supernatants was assessed via Bio‐Plex Pro Human 27‐plex immunoassay which measures IL‐1β, IL‐1RA, IL‐2, IL‐4, IL‐5, IL‐6, IL‐7, IL‐8, IL‐9, IL‐10, IL‐12p70, IL‐13, IL‐15, IL‐17, IFNγ, TNF, FGF‐2, G‐CSF, GM‐CSF, PDGF‐BB, VEGF‐A, CCL2, CCL3, CCL4, CCL5, CCL11, and CXCL10 (BioRad) and CXCL10, IL‐1Ra, VEGF (BioRad), IFNγ, and IFNα (eBioscience) Simplex assays. Samples were read using a Bio‐Plex 200 system (BioRad) and analyzed with Bio‐Plex Manager 6.0 software (BioRad). For statistical analysis, samples at or below the limit of detection were assigned the limit of detection value for the assay. Levels of pre‐formed, cell‐associated mediators were determined from freeze‐thaw lysates of CBMC. ELISA using commercial, matched antibody pairs was used to measure CCL8 (R&D Systems, Minneapolis, MN), CXCL9 and CXCL11 (both Peprotech).
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5

CXCL9 and CXCL10 Quantification

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CXCL9 and CXCL10 were performed according to the manufacturer’s instruction (PeproTech, London, UK).
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6

Expression of Inflammatory Mediators

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The microarray data12 (link) are accessible in the Gene Expression Omnibus database (accession number GSE54181). Plots were generated using the webtool R2: microarray analysis and visualization platform (http://r2.amc.nl).
Total RNA was isolated using the NucleoSpin RNA II kit (Machery-Nagel, Leiden, The Netherlands) according to the manufacturer’s instructions. Total RNA (0.5–1.0 μg) was reverse transcribed using the SuperScript III First Strand synthesis system from Invitrogen. TaqMan PCR was performed using the TaqMan Universal PCR Master Mix and pre-designed, pre-optimized primers and probe mix for CCL2, RANTES (CCL5), IL-8 (CXCL8), CXCL9 and GAPDH (Applied Biosystems, Foster City, USA). Threshold cycle numbers (Ct) were determined using the CFX PCR System (Bio-Rad, Veenendaal, The Netherlands), and the relative quantities of complementary DNA per sample were calculated using the ΔΔCt method using GAPDH as the calibrator gene.
Enzyme-linked immunosorbent assays (ELISAs) for CCL2, RANTES, IL-8 and CXCL9 were performed according to the manufacturer’s instruction (PeproTech, London, UK).
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7

Inflammatory Signaling in Cardiac Cells

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H9c2 cells were obtained from Bioresource Collection and Research Center (Hsinchu, Taiwan). Human peripheral blood mononuclear cells (PBMCs) were obtained from healthy volunteers of our laboratory. Normal human cardiac fibroblasts (NHCFs) were obtained from Lonza Group (Walkersville, MD, USA). Protein array kits were purchased from R & D System (Minneapolis, MN, USA). Isoproterenol (ISO) and sulforhodamine B (SRB) were purchased from Sigma-Aldrich, Inc. (St. Louis, MO, USA). Hematoxylin and Eosin (HE) staining and trichrome staining were performed under the help of Rapid Science Co., Ltd. (Taichung, Taiwan). Recombinant human TNF-α, TGF-β, CXCL9, and CCL20 were purchased from Peprotech (Rocky Hill, NJ, USA).
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8

Transwell Migration of T Cells

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Migration of T cells was assessed by using transwell permeable supports with 5-μm polycarbonate membrane (Costar, 3387). To determine cell migration in response to soluble factors, the lower chamber was loaded with 0.1% FBS, 200 ng/ml CCL21 (Peprotech, 250-13), 200 ng/ml CCL19 (Peprotech, 250-27B), 150 ng/ml CXCL9 (Peprotech 250-18) or 50 ng/ml CXCL10 (Peprotech, 250-16) in T-cell medium. T cells were incubated for 2 (naïve) or 3 hours (activated) at 37°C and migrated cells in the bottom chamber were collected and counted by flow cytometry using Precision Count Beads™. According to the experimental requirements, activated T cells were pre-treated for 1 hour with 10 μg/ml anti-CCR7 (R&D, 4B12), 250 μg/ml anti-CXCR3 (Biolegend, CXCR3-173), 100 μM Rac1 inhibitor NSC23766 or the appropriate isotype or vehicle control.
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9

Chemokine-Induced CD4 T Cell Migration

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Isolated CD4 T cells or human PBMC cells were suspended at a density of 1 × 106 cells/ml in RPMI1640 + 10 mM HEPES + 0.1% BSA. After 1 h of serum-starvation, 50 μl of the cell suspension were added to 5 μm pore size 96 well inserts (Corning, Acton, MA, USA). The lower wells contained either 250 μl medium alone (RPMI1640 with 10 mM HEPES and 0.1% BSA) or medium plus CCL19, CCL21, CCL4, SDF-1α, CXCL9, CXCL10, and CCL5 (all 100 ng/ml, Peprotech). In some cases, apyrase grade VII (20 units/ml, Sigma-Aldrich) or carbenoxolon (5 μM, 30 min pretreatment, Cayman Chemicals) was added together with agonists. Cells were allowed to transmigrate for 3 h at 37 °C and 5% CO2, then transwell plates were kept on ice for 20 min and centrifuged at 180 × g for 3 min. Inserts were discarded, and the number of cells transmigrated compared to input was determined by flow cytometry. “% input” was calculated as (number of transmigrated CD4 T cells/number of CD4 T cells added to the upper well) × 100.
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10

Murine Myeloma Cell Culture Protocol

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5TGM1 and 5T33 multiple myeloma cell lines were kindly provided by Dr. Yoneda, (University of Texas, San Antonio, TX) and maintained in RPMI 1640 medium supplemented with 10% FBS, 2 mmol/L glutamine, 55 μmol/L β-mercaptoethanol and antibiotics. Cell lines were periodically authenticated by morphologic inspection, verified to be mycoplasma free, and were passaged for no more than 4 to 6 weeks from thawing.
Recombinant mouse IL-12, CXCL9, CXCL10 and human CXCL12, were from Peprotech EC (London, U.K.). Mouse IL-18 and IL-15 were from R&D systems. BSA, Carboxyfluorescein succinimidyl ester (CFSE), PKH26, Brefeldin A, Monensin and 7-Aminoactinomycin D (7-AAD) were from Sigma-Aldrich (St. Louis, MO, USA). Cytofix/Cytoperm TM Fixation/Permeabilization Kit was from BD Biosciences (San Diego, CA, USA).
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