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Flow cytometry reagent

Manufactured by BD
Sourced in United States

Flow cytometry reagents are a specialized set of materials used in flow cytometry analysis. They enable the identification, quantification, and characterization of various cell populations and their properties within a sample. These reagents include fluorescent-labeled antibodies, dyes, and other components that facilitate the detection and analysis of cellular characteristics.

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10 protocols using flow cytometry reagent

1

Mechanism-Based Myeloperoxidase Inhibitor Study

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Clozapine was donated by Apotex (Toronto, ON, Canada), and olanzapine was purchased from Toronto Research Chemicals Inc. (Toronto, ON, Canada). Fluperlapine was purchased from MedChemExpress (Princeton, NJ, USA). The mechanism-based myeloperoxidase inhibitor PF-1355 [2-(6-(2,5-dimethoxyphenyl)-4-oxo-2-thioxo-3,4-dihydropyrimidin-1(2H)-yl)acetamide] was kindly provided by Pfizer (New York, NY, USA). Qualified One Shot™ fetal bovine serum (FBS; Gibco, Grand Island, NY, USA) was heat-inactivated at 56 °C for 30 min in-house, as necessary. PMA was purchased from BioShop Canada Inc. (Burlington, ON, Canada). Flow cytometry reagents were obtained from BD Biosciences (Mississauga, ON, Canada), unless otherwise specified. All other reagents were commercially obtained.
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2

Immunological Reagents and Adjuvants

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Cell culture reagents were procured from Sigma-Aldrich (USA) unless otherwise mentioned; ELISA kits were procured from R&D Biosystems. Flow cytometry reagents and antibodies were from BD Biosciences and Santa Cruz, respectively, unless specified. Monophosphoryl Lipid-A and Alhydrogel® adjuvant 2% (alum) were purchased from In vivogen. Montanide ISA720VG, originally procured from SEPPIC, France, was a kind gift from Dr. S. N Singh, Biovet Pvt. Ltd.
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3

Modified Vaccinia Ankara Virus Characterization

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Modified vaccinia ankara virus was generated as previously described. This modified vaccinia ankara virus is a modified vaccinia that contains the full-length ovalbumin protein but lacks lytic ability. Quadrivalent FluMist® was purchased from AstraZeneca (Wilmington, DE). Bleomycin was purchased from App Pharmaceuticals (Schumburg, IL). PMA and Ionomycin were purchased from Sigma-Aldrich (St. Louis, MO). Flow cytometry reagents were purchased from BD Biosciences (Franklin Lakes, NJ). Antibodies utilized were from Biolegend (San Diego, CA), see Supplemental Table 1.
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4

Propolis Evaluation in Cell Culture

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Eagle’s minimum essential medium (EMEM), fetal bovine serum (FBS), trypsin-0.05 % EDTA solution, and antibiotic solution were obtained from Gibco Laboratories (NY, USA). Phosphate-buffered saline (PBS) without Ca2+ and Mg2+, pH 7.4, were supplied by PAA Laboratories GmbH, Gotzis, Austria. Trypan blue, 3-[4,5-dimethylthiazol-2yl]-2,5-diphenyl tetrazolium bromide (MTT), hydrogen peroxide, zinc aspartate, bovine serum albumin (BSA), and dimethyl sulphoxide (DMSO) were purchased from Sigma-Aldrich, Seelze, Germany. Flow cytometry reagents were obtained from BD Biosciences, San Jose, CA, USA. All salts and other cell culture solutions were of cell culture grade (Gibco Laboratories, NY, USA). Sterile and non-toxic plates, flasks, tips, and centrifuge tubes were obtained from Sarstedt, Numbrecht, Germany. Reagents for quantitative determination of zinc were from Merck, Darmstadt, Germany. Antioxidant and polyphenol analyses’ reagents were from Sigma-Aldrich, Seelze, Germany. Raw pure propolis was purchased from Apipol Farma, Myslenice, Malopolskie, Poland. In the present study, a representative mixture of propolis obtained from apiaries located in North Poland was evaluated [16 (link)].
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5

Cytotoxicity and Oxidative Stress Assay

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M199 and RPMI 1640 media, fetal bovine serum (FBS) and antibiotic-antimycotic mix (100X) were purchased from GIBCO/BRL (Grand Island, NY, USA); 0.25% trypsin and tryple express were acquired from INVITROGEN (Waltham, MA, USA. Sterile plastic material for tissue culture was obtained from NUNC (Rochester, NY, USA) and CORNING (Glendale, AZ, USA). Flow cytometry reagents were purchased from Becton Dickinson (Franklin Lakes, NJ, USA). Tumor necrosis factor alpha (TNF-α) was purchased from R&D Systems (Minneapolis, MN, USA). Thymidine [methyl-3H] was supplied by Perkin Elmer (Boston, MA, USA). 2,7-dichlorodihydrofluorescein diacetate (H2DCFDA) was purchased from Molecular Probes, Invitrogen (Carlsbad, CA, USA). Peroxidase-labeled monoclonal antibody against Von Willebrand factor and all the fluorescein isothiocyanate (FITC)-labeled monoclonal antibodies vs. human adhesion molecules were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). TiO2-NPs were acquired from Paris Drugstore (Mexico City, Mexico).
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6

Endothelial and Monocytic Cell Interactions

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EA.hy926 (EAHY) endothelial cells were kindly provided by Professor Cora-Jean S. Edgell (Pathology Department, University of North Carolina, USA) and were previously described by Tseng et al. [40] . Human U937 mononuclear cells were obtained from American Type Culture Collection [41] . EAHY and U937 cells were cultured in Dulbecco's modified Eagle's Medium (DMEM) and RPMI1640, respectively supplemented with 10% fetal bovine serum (FBS), antibiotics and glutamine (Sigma Chemical Company, USA). ELISA kits for PAI-1, uPA and suPAR were purchased from R&D Systems (Minneapolis, MN, USA). PGF ELISA kits were obtained from Cayman Chemical (Ann Arbor, MI, USA). P-cresol and 3-(4,5-Dimethylthiazol-2-yl)-2,5 -diphenyltetrazolium bromide (MTT) were purchased from Sigma (St. Louis, MO, USA). 2′,7′-dichlorofluorescein diacetate (DCFH-DA) was obtained from Molecular Probes (Invitrogen Detection Technologies, Grand Island, NY, USA). Flow cytometry reagents were from Becton Dickinson (Franklin Lakes, New Jersey, USA).
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7

E. coli Growth and Genetic Manipulation

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E. coli K-12 strains (SI Appendix, Table S1) were grown aerobically at 37 °C in LB medium (63 (link)) with shaking at 200 rpm. Colony formation was on LB agar at 37 °C. Bacteriophage P1-mediated transduction (64 ) or CRISPR-based allelic exchange (24 (link)) was used for strain construction. Flow cytometry reagents were purchased from Becton Dickinson. Tryptone, yeast extract, powder for LB broth and agar, and carboxy-H2DCFDA were obtained from Thermo Fisher Scientific. Other reagents, including antimicrobials (ciprofloxacin, oxolinic acid, kanamycin, ampicillin, tetracycline, moxifloxacin, and chloramphenicol), phenol, dimethyl 2-oxoglutarate, cyclic AMP, sodium pyruvate, and DMSO were purchased from Sigma-Aldrich. Gentamicin, amikacin, hydrogen peroxide, chlorhexidine, ethanol, isopropanol, 1-butanol, potassium dichromate, sodium hypochlorite solution (5.2%), hydrogen chloride, and sodium hydroxide were purchased from Sangon Biotech. Meropenem (Shenghuaxi Pharmaceutical) and ceftriaxone (Roche) were from Zhongshan Hospital (Xiamen, China) pharmacy.
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8

Annexin V-APC and PI staining for apoptosis

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Flow cytometry reagents (Becton, Dickinson and Company, USA) were used according to the manufacturer’s protocol. Briefly, ARPE-19 cells were trypsinized and collected in 100μL 1× binding buffer. Then the cells were incubated with the labeling solution (5μL Annexin V-APC and 5μL propidium iodide (PI)) for 20min in the dark. After that, each sample was diluted with 1×binding buffer to 500μL at the cell density of 1×106/mL. The samples were analyzed by a flow cytometry (Beckman CytoFLEX S, Germany).
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9

Molecular Mechanisms of DIM-Induced Effects

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3,3'-Diindolylmethane (DIM) (catalog no. BML-GR207), p-AMPK inhibitor Compound C, intracellular Ca2+ chelator BAPTA-AM, SOCE nonspecific inhibitor 2-APB, Fluo3/AM obtained from Sigma-Aldrich (St. Louis, MO, USA), Mag-Fluo-4/AM (M14206) and lipofectamin 2000 were purchased from invitrogen (Carlsbad, CA, USA). DIM was dissolved in dimethylsulfoxide (DMSO) and prepared into 100mM concentration stock solution, which was stored at 4 °C. 3-[4,5-dimethylthizaol-2-yl]-2,5-diphenyl-2H-tetrazolium bromide (MTT), Hoechst 33342, paraformaldehyde (PFA), bicinchoninic acid (BCA) protein assay kit (P0011) were purchased from beyondtime (Shanghai, China). The flow cytometry reagent was purchased from BD bioscience (San Jose, CA, USA). Primary antibodies against STIM1 (1:1000, abcam), phosptho-AMPK (1:1000, CST), phosptho-ACC (1:1000, CST), Calpain (1:1000, immunoway), phosptho-PERK (1:1000, CST), ATF6 (1:1000, CST), CHOP (1:1000, CST), phosptho-IRE1α (1:1000, abcam), Bcl-2 (1:1000, CST), Bax (1:1000, CST), cleaved-caspase3 (1:1000, CST), LC3B (1:1000, CST), primary antibodies against GAPDH (1:10000) and horseradish peroxidase (HRP)-labeled secondary antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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10

Exploring Cell Signaling Pathways

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Dulbecco’s modified Eagle medium (DMEM) was purchased from Hyclone (MD, USA), primary antibodies anti-phosphory-p38 (1:1000), anti-cleaved caspase3 (1:1000), anti-cleaved PARP (1:1000), anti-Bax (1:1000), anti-p38 (1:1000), anti-caspase 3 (1:1000) were purchased from Cell Signaling Technology (MA, USA). Primary antibodies for PCNA and crystal violet dye were purchased from Bioss Biotechnology (Beijing, China). Primary antibody for β-actin and horseradish peroxidase (HRP)-labeled secondary antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The flow cytometry reagent was purchased from BD Bioscience (San Jose, CA, USA). The p38 MAPK inhibitor SB203580, DIM (catalog no. BML-GR207), BAPTA-AM, A23187, Fluo-3/AM and Hoechst 33342 dye, were purchased from Sigma-Aldrich (St. Louis, MO, USA). SB203580 and DIM were dissolved in dimethyl sulfoxide (DMSO) as stock solution, respectively. The final concentration of DMSO did not exceed 0.1%.
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