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17 protocols using dexamethasone (dex)

1

Immunomodulatory Effects of LPC in Pneumocystis Pneumonia

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Healthy C57BL/6 female mice were purchased from Vital River Laboratory Animal Technology Co., Ltd. (Beijing China) and housed in specific pathogen-free conditions. Mice were randomly grouped into four groups as described previously. DEX-induced immunocompromised mice were given drinking water dissolving 4 mg/L DEX (Sigma) and 0.5 g/L tetracycline (Solarbio) consecutively for 2 weeks before Pneumocystis inoculation. Mice were continuously fed DEX before being sacrificed (6 (link), 7 (link)). To explore the function of LPC, the DEX-treated mice were intranasally administered LPC (MedChemExpress) 5 μg each time on day 8, day 10 and day 12 post Pneumocystis infection. The experimental protocol was approved by the Capital Medical University Animal Care and Use Committee.
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2

Cellular Inflammation Assays with Compounds

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RAW264.7, HeLa, 3T3, HePG2, MG-63, PC3, 293T and A549 cell lines were purchased from the Cell Bank of the Chinese Academy of Science Type Culture Collection (China). Cells were cultured according to the supplier’s instructions.
LPS from Escherichia coli O55:B5 (Sigma-Aldrich, USA; # L-2637) and recombinant human tumor necrosis factor-alpha (TNF-ɑ) (Sangon Biotech, China; # C600021) were used to induce inflammation. Progesterone, aldosterone, PMA, Azd9567 and Dex were purchased from MCE (Medchem Express, USA), and and all the tested compounds were bought from Chemdiv and the compounds are listed in Supplementary Table S1. pGL4.36[luc2P MMTV Hygro] (GenBank accession no. FJ773214) was purchased from Promega. pCMV-GR11 (Addgene, USA; # 89105), pCMV-hAR (Addgene, USA; # 89078), and pcDNA3-PRB (Addgene, USA; # 89130) were gifts from Elizabeth Wilson. pNF-κB-luc (Beyotime Biotechnology, China; #D2206) was purchased from Beyotime. pCMV-hMR was constructed by cloning MR fragment into the plasmid of pCMV-hAR by the technology of seamless cloning (Vazyme, China; # C112-1). AP-1-luc was constructed by cloning five copies of AP-1 promoter into the BmtI and BglII sites of pNF-κB-luc. ARR3tk promoter was cloned into the HindIII and XhoI sites of PGL4.18 vector (GenBank accession no. DQ188838) (Promega, USA).
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3

Macrophage and HeLa Cell Signaling Assay

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Hela (CLS Cat# 300194/p772_HeLa) and RAW264.7 (CLS Cat# 400319/p462_RAW‐2647) (a murine macrophage cell line) cells were grown in high‐glucose DMEM supplemented with glutamine, penicillin, streptomycin, and 10% FBS (Gibco). pCMV‐GR11 (Addgene, #89105) was a gift from Elizabeth Wilson. pGL4.36[luc2P MMTV Hygro] and NF‐κB‐Luc were purchased from Promega and Beyotime, respectively. Five copies of the AP‐1 promoter were cloned into the BmtI and BglII sites of pNF‐κB‐luc. LPS was from Escherichia coli O55:B5 (Sigma Aldrich; L‐2637). Recombinant human tumor necrosis factor‐alpha (TNF‐α) was purchased from Sangon Biotech. Phorbol myristate acetate (PMA), AZD9567, and DEX were purchased from MedChemExpress (MCE), and all the tested compounds were bought from TargetMol.
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4

Dexamethasone Preconditioning and Oxidative Stress

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Dex and H 2 O 2 solution were purchased from Sigma-Aldrich. Dex was dissolved into PBS and then diluted with PBS to obtain the desired concentration. H 2 O 2 solution was diluted with sterile water. Yohimbine hydrochloride (YOH) was purchased from MedChem Express, and was dissolved into dimethylsulfoxide (DMSO), YOH (1 μM) was administrated 10 min before the administration of Dex, while Dex (10 μM) was given 120 min before the H9C2 cells were subjected to H 2 O 2 exposure (Dex preconditioning) according to our preliminary experiments and other studies [16, (link)20, (link)22] (link). Antibodies that were purchased from Cell Signaling Technology included anticleaved caspase3 (#9661), anti-receptor-interacting serine/ threonine-protein kinase 1(RIPK) (#3493), anti-receptor interacting protein kinase 3 (RIPK3) (#95702) and anti-GAPDH (#5174) antibodies. Anti-heme oxygenase-1 (HO-1) antibodies (ab13248) were obtained from Abcam. HRPlabeled Goat Anti-Rabbit IgG (H + L) and HRP-labeled Goat Anti-Mouse IgG (H + L) were obtained from beyotime (Shanghai, China).
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5

Dexamethasone Modulates Intracerebral Hemorrhage in Mice

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Thirty-six adult male C57BL/6 mice were divided into six groups according to a computer-based randomization in experiment 1 (n = 12) as follows: 1) sham + vehicle, 2) ICH + vehicle, and 3) ICH + Dex. Autologous blood injection in the basal ganglia was used to establish a mild ICH model in mice. Based on previous studies (Gu et al., 2011 (link); Liang et al., 2017 (link)) and our preliminary experiments, 25 μg/kg of Dex (Jiangsu Hengrui Medicine Co., Ltd., Jiangsu, China) was administered using intraperitoneal injection post-ICH daily for 3 days. Mice in sham + vehicle and ICH + vehicle groups received an equal volume of saline via intraperitoneal injection (Figure 1A).
Twenty-four adult male C57BL/6 mice were divided into two groups according to a computer-based randomization in experiment 2 (n = 12) as follows: 1) ICH + Dex + GSK and 2) ICH + Dex + vehicle. GSK1016790A (GSK, 1 μmol/2 μl, HY-19608, MedChemExpress, United States), an agonist of TRPV4, was dissolved in 10% dimethyl sulfoxide (DMSO) (D8418, Beyotime, China) and 90% corn oil (HY-Y1888, MedChemExpress, United States), and injected into the left lateral ventricle (stereotaxic coordinates: 1.0 mm lateral to the midline, 0.3 mm posterior to the bregma, and 2.5 mm below the skull) 30 min before Dex administration. Vehicle was administered with an equivalent volume of DMSO plus corn oil as a control (Figure 1B).
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6

Insulin Resistance and Inflammation in C2C12 Cells

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C2C12 cells were treated with dexamethasone (DEX; catalogue no.: HY-N2609) and TNF-α (catalogue no.: HY-P1825), both obtained from MedChemExpress (Monmouth Junction, NJ, USA), to induce insulin resistance and inflammation, respectively. All cell experiments were conducted in a blinded fashion.
miR-193b mimic/inhibitor transient transfections were also conducted in C2C12 cells. miR-193b mimic and inhibitor sequences have been described in a previous study [24 (link)]. The miR-193b mimic was a duplex RNA, with the sense sequence 5′-aacuggcccacaaaguccc-3′ and the antisense sequence 5′-gacuuugugggccaguuuu-3′. Nontargeting negative control sequences (sense 5′-uucuccgaacgugucacgutt-3′, antisense 5′-acgugacacguucggagaatt-3′) were used as controls. The inhibitor of miR-193b (5′-gggacuuugugggccaguu-3′) was a single RNA sequence that was exactly complementary to miR-193b. A nontargeting negative control sequence (5′-caguacuuuuguguaguacaa-3′) was used as a control. Transient transfections were performed using Lipofectamine 3000 (Invitrogen), according to the protocol provided by the manufacturers.
After treatment, cells were harvested for myosin immunostaining (see below), or PCR analysis of miR-193b, PDK1 and Dnmt1 expression, and western blotting for analysis of PDK1, Akt, p-Akt, Myh, mTOR and p-mTOR content, as described above (see ESM Methods and ESM Table 1).
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7

Pharmacological Compounds in Cell Culture

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LiCl (Sigma, 203637) was used at 25 mM. FH‐535 (Tocris, 4344) and ICG‐001 (Tocris, 4505) stocks were diluted in dimethyl sulfoxide (DMSO, Sigma) and used at the indicated concentrations. Vincristine (Pfizer, 1 mg ml−1) and dexamethasone (Fortecortin, 4 mg ml−1) were kindly provided by Hospital del Mar. L‐Asparaginase was obtained from MedChemExpress (HY‐P1923).
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8

Xenograft Model of NSCLC Tumors

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The H1944 or A549 cells were trypsinised and resuspended in PBS at a density of six (H1944) or two (A549) million cells/50 µl and mixed with an equal volume of BME (#3533-005-02, Sigma-Aldrich) NOD-scid-γ (NSG) mice (±7 weeks old) were anesthetised before injection of six million cells subcutaneously into one of the flanks. Once the tumour size reached between 100 and 300 mm3 the mice were treated with 4 mg/kg dexamethasone (D2915-100MG, Sigma-Aldrich; dissolved in water), 75 (H1944) and 20 (A549) mg/kg Linsitinib (HY-10191, MedChemExpress; dissolved in 25 mM tartaric acid), 25 mg/kg GSK1838705A (MedChemExpress; dissolved in 20% sulfobutyl ether β-cyclodextrin (ISP; pH 3.5)), combination, or vehicle by I.P. injections (dexamethasone) and orally (IGF-1R inhibitors) on a daily basis. Tumour volume was monitored by calliper measurements every 2 days. Mice were kept under standard temperature and humidity conditions in individually ventilated cages, with food and water provided ad libitum. The NKI Animal Experiments Committee approved all in vivo experiments (project number 9139 and 9907).
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9

Cochlear hair cell protection strategies

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HEI-OC-1 cells were cultured at 33°C with 10% CO2 in DMEM containing 1.0 g/L of glucose, 10% FBS, and 1% N-2 (Gibco, New York, NY, United States). The middle cochlea basilar membranes were then dissected from P3 rats and laid onto a glass sheet (coated with ornithine and laminin) that had been placed in a dish. The HEI-OC-1 cells, and the HCs, were cultured with different concentrations of dexamethasone (0.5, 5 μM) for 24 h, or with 0.5 nM rapamycin, or 5 mM 3-Ma, for 6 h before exposure to H2O2. HEI-OC-1 cells were then treated with H2O2 (2, 5, and 10 mM) while the HCs were treated with H2O2 (0.5, 0.8, 1 mM) for 1 h. Both cell types were then allowed to recover in culture medium for another 24 h, together with corresponding concentrations of dexamethasone, rapamycin, or 3-MA. The dexamethasone, rapamycin, and 3-MA were all obtained from Med Chem Express (NJ, United States).
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10

Quantifying Reactive Oxygen Species in Plants

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ROS detection by luminol-based chemiluminescence assay was performed as previously described, with some modifications (Liang et al., 2013) . Leaf disks (0.2 cm 2 ) were obtained from the seventh to ninth leaves of 4week-old plants and incubated overnight with water in a 96-well plate. The following day, 600 μM luminol (Merck KGaA) was added along with the indicated elicitors, including LPS (L9143, Merck KGaA), flg22 (GenScript, Nanjing, China), 3-OH-C10:0 (Bide Pharmatech Ltd., Shanghai, China), and dexamethasone (MedChemExpress, Monmouth Junction, NJ, USA). The chemiluminescent signal was immediately recorded using a Photek camera (HRPCS5, Photek, East Sussex, UK). When bacteria were used for the luminol-based assay, the bacterial cells were freshly diluted to the desired concentration as previously described (Smith and Heese, 2014) . HRP (Merck KGaA) was exogenously applied for the luminol-based assay at 20 mg L -1 (w/v).
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