The largest database of trusted experimental protocols

4 protocols using d3r6y

1

Caspase-3 and NF-κB Immunostaining in DBA/2J Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
A time course of immunostaining of Caspase-3 and NF-κB was carried out on DBA/2J mice. The time point selected was 4 weeks. After dewaxing, the cochlear tissues were subjected to heat induced antigen retrieval in citrate buffer (0.01 mol/L, pH 6.0), washed three times in 1 × PBS at room temperature for 5 min, and permeabilized with 3% H2O2 for 10 min. The slides were then blocked with 3% bovine serum albumin (BSA) and 3% goat serum at 37°C for 1 h and stained with rabbit anti-cleaved Caspase-3 antibody (1:250 dilution) (D3R6Y, Cell Signaling Technology Inc., Danvers, MA, United States) or NF-κB antibody (1:50 dilution) (P65, Santa Cruz Biotechnology Inc., Santa Cruz, CA, United States) at 4°C overnight. Following a thorough wash with 1 × PBS for 5 min, the sections were immersed in Goat anti-rabbit IgG(H + L) HRP (1: 400 dilution) (Sparkjade, China)and Goat anti-mouse IgG(H + L) HRP (1: 400 dilution) (Absin, China) at 37°C for 30 min, and then counterstained with 4 Detection Kit (ZLI-9018 DAB kit, ZSGB-BIO, China) for 15 min and with Harris hematoxylin (Sigma, China) for 1 min at room temperature. The slides were sealed using neutral gum and examined under a scanning confocal microscope.
+ Open protocol
+ Expand
2

Western Blot Analysis of Cochlear Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cochlear tissue was ground with Radioimmunoprecipitation assay (RIPA) buffer (Beyotime, Jiangsu, China) containing phosphatase inhibitors (Roche, Basel, Switzerland) and phenylmethylsulfonyl fluoride (PMSF) (Beyotime). Total protein samples were separated by electrophoresis in 15% SDS polyacrylamide gels (Servicebio, China) and electrotransferred to a nitrocellulose membrane (Millipore, Billerica, MA, United States). The membrane was subsequently blocked with 5% non-fat milk for 1 h. Afterward, the membrane was incubated at 4°C overnight with the following primary antibodies: anti-NF-κB (1:2000 dilution) (P65, Santa Cruz Biotechnology Inc., Santa Cruz, CA, United States), anti-Caspase-3 (1:1000 dilution) (D3R6Y, Cell Signaling Technology Inc., Danvers, MA, United States).
Next day, the membrane was washed three times with Tris-buffered saline-Tween 20 (TBST) buffer, incubated with corresponding horseradish peroxidase-conjugated secondary antibody for 1 h at room temperature and then washed with TBST buffer three times. The immunoreactive proteins on the blots were visualized using the ECL reagent (Sparkjade Biotechnology, China) and detected using a chemiluminescence imaging system (ChemiScope 6200 Touch; Clinx Science Instruments Co., Ltd., Shanghai, China). The protein bands were quantified by detecting the gray values using ImageJ software.
+ Open protocol
+ Expand
3

Comprehensive Immunoblotting Techniques

Check if the same lab product or an alternative is used in the 5 most similar protocols
Standard techniques were used for protein quantification, separation, transfer, and blotting in KLE and HEC-1A cells. Primary antibodies immunoblotting antibodies were used: ERRα (1: 500, ab76228, Abcam, London, UK), ERRα (1:500, E1G1J, Cell Signaling Technology, Massachusetts, USA), NLRP3 (1:500; 19,771-1AP, Proteintech, Wuhan, China), HIF-1α (1:500; 20,960-1AP, Proteintech, Wuhan, China), cleaved GSDMD (1:500; #36,425, Cell Signaling Technology, Massachusetts, USA), GSDMD (1:500, E9S1X, Cell Signaling Technology, Massachusetts, USA), GSDME (1:500, 84005S, Cell Signaling Technology, Massachusetts, USA), Caspase1 (22,915–1-AP, Proteintech, Wuhan, China), Caspase-1 (YT5743, Immunoway, USA), Caspase-1 (1:500, D7F10, Cell Signaling Technology, Massachusetts, USA), Caspase-3 (1:500, D3R6Y, Cell Signaling Technology, Massachusetts, USA), IL-18 (1:500,10,663–1-AP, Proteintech, Wuhan, China), cleaved-IL-1β (1:500, D3A3Z, Cell Signaling Technology, Massachusetts, USA), β-actin (1:2000, YM3028l, Immunoway, USA), β-tublin (1:2000, YM3030, Immunoway, USA), and GAPDH (1:2000; YM3029, Immunoway, USA).
+ Open protocol
+ Expand
4

Thiazolyl Hydrazone Derivatives Synthesis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The thiazolyl hydrazone derivatives of 1-indanone were synthesized at the University of Karachi, Pakistan (27 (link)). Irinotecan hydrochloride was procured from Alfa Aesar (Haverhill, MA). Dulbecco’s modified Eagle’s medium (DMEM, IX), fetal bovine serum (FBS), phosphate buffered saline (PBS), and trypsin 0.25% were acquired from Hyclone (Waltham, MA). Monoclonal antibodies D97JR (selective against ALDH1A1), E7K2Y (against CD44), D14E12 (against NF-κB p65), E4Z1Q (against topoisomerase I), D3R6Y (against procaspase-3), 44D4 (against IkBα), 16H1 (against GAPDH), D5C9H (against TBP), and secondary anti-rabbit/mouse HRP linked antibody were bought from Cell Signaling (Danvers, MA). A-11005 (alexafluor 594 secondary antibody against NF-κB) and DAPI (catalog # D3571), which stains the nucleus, were purchased from Invitrogen (Waltham, MA). The NF-κB p65, Bcl-2, and 18 S TaqMan gene expression and superscript IV reverse transcription kits were purchased from Fisher Scientific (Waltham, MA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!