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5 protocols using ab22651

1

Immunohistochemical Labeling of Brain

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Immunohistochemical labeling of embryonic/postnatal brain sections or isolated cortical cells was performed as described earlier (Higginbotham et al., 2013 (link); Yokota et al., 2009 (link)). The following primary antibodies were used: acetylated tubulin (mouse, T6793, Sigma-Aldrich), α-tubulin (mouse, T6199, Sigma-Aldrich), BLBP (rabbit, ab32423, Abcam), BrdU (mouse, 347580, Becton Dickinson), Ctip2 (rat, ab18465, Abcam), Cux1 (rabbit, sc-13024, Santa Cruz Biotechnology), GABA (rabbit, A2052, Sigma-Aldrich), GFAP (rabbit, Z0334, DAKO), GFP (chicken, ab13970, Abcam), laminin (rabbit, L9393, Sigma), MEMO1 (rabbit, ab124901, Abcam), NeuN (mouse, MAB377, Chemicon), phospho-Vimentin (mouse, ab22651, Abcam), Pou3f2 (mouse, sc-393324, Santa Cruz Biotechnology), PTPRZ1 (rabbit, HPA015103, Sigma-Aldrich), PV (mouse, MAB1572, Millipore), RC2 (mouse IgM, Developmental Studies Hybridoma Bank, University of Iowa), RFP (rabbit, 600-401-379, Rockland), SST (rat, MAB354, Millipore), Tbr1 (rabbit, ab31940, Abcam), Tbr2 (rat, 14-4875, eBioscience), Tuj1 (mouse, 1409, STEMCELL technologies) and tyrosinated tubulin (rat, ab6160, Abcam). Appropriate Cy2, Cy3 or Alexa dye-conjugated secondary antibodies (Jackson ImmunoResearch, Molecular Probes) were used to detect primary antibody binding. DAPI (Sigma-Aldrich, D9542) was used as a nuclear counterstain.
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2

Immunohistochemical analysis of neural progenitor cells

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Upon completion of timelapse imaging, brain slices were fixed in 4% PFA in PBS overnight at 4 °C and then transferred to PBS. Slices were subjected to boiling citrate-based antigen retrieval solution for 20 min and permeabilized and blocked in blocking buffer (PBS plus 0.1% Triton X-100, 10% serum, and 0.2% gelatin) for 1 h. Primary antibodies were diluted in blocking buffer and applied to slices for 36 h at 4 °C. Slices were washed with PBS plus 0.5% Triton X-100 and then incubated in secondary antibodies diluted in blocking buffer for 3–5 h. Images were acquired on a Leica TCS SP5 X laser confocal microscope. Primary and secondary antibodies used: goat anti-SOX2 (Santa Cruz Biotechnology, sc-17320, 1:250), rabbit anti-TBR2 (Abcam, ab23345, 1:100), chicken anti-GFP (Aves Labs, GFP-1020, 1:1,000), rabbit anti-FOXG1 (Abcam, ab18259, 1:250), mouse anti-pVIM (Abcam, ab22651, 1:250), mouse anti-phosphohistoneH3 (Abcam, ab14955, 1:200), AlexaFluor 488, 546, 594, or 647-conjugated donkey anti-goat, -rabbit, -mouse IgG (Invitrogen, 1:500), and AlexaFluor 488 donkey anti-chicken IgY (Jackson ImmunoResearch, 703-545-155, 1:500).
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3

Western Blot Analysis of Vimentin and β-catenin

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Cells were lysed in RIPA buffer (Beyotime) on ice for 5 min to collect total protein. After protein concentration examination by a bicinchoninic acid kit (Thermo Fisher Scientific), an equal amount of protein sample (30 µg) was run on 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and loaded onto polyvinylidene fluoride membranes. The membranes were treated with nonfat milk at 20°C for 2 h and then hybridized with the primary antibodies (all diluted at 1:1,000) against Vimentin (ab22651, Abcam), β-catenin (ab231305, Abcam) and GAPDH (ab8245, Abcam) for 12 h at 4°C, and then hybridized with the secondary antibody (1:10,000, #7076, CST) for 1 h at 20°C. The protein bands were developed using the enhanced chemiluminescence kit (Thermo Fisher Scientific), and the protein quantification was conducted using an Image-Pro® Plus Software. GAPDH was used as the endogenous reference [25 (link)].
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4

Shear stress-induced Jagged1 and vimentin signaling

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For shear stress experiments with imaging as readout, HUVEC were seeded into collagen IV coated 6-channel slides from ibidi (μ-slide VI 0.4, #80606) at 106 cells/ml. The next day HUVEC were exposed to 1 Pa shear stress for 24 hours or kept as a static control. Afterwards the cells were washed twice with PBS and fixed in 4% PFA for 20 minutes. Fixed cells were permeabilized with 0.1% Triton X-100 in PBS for 15 minutes and blocked with 4% donkey serum in PBS for 30 minutes. The cells were stained for Jagged1 (H-66, Santa Cruz) and S55 phospho-vimentin (ab22651, Abcam) overnight at 4 °C. Secondary antibodies (A21206 and A21146, ThermoFisher) were incubated for 45 minutes at RT. The nuclei were stained with DAPI (Sigma) for 5 minutes. After a final washing step with PBS Mowiol was injected into the channels as a mounting medium. The cells were imaged with a Zeiss Axiovert 200 M, using a 40x/0.95 objective.
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5

Comprehensive Immunohistochemical Antibody Panel

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The antibodies to EMX2 (ab94713; 1:50), FOXG1 (ab18259; 1:400), p-VIM (ab22651; 1:120), SOX2 (ab79351; 1:500), SATB2 (ab51502; 1:50), CTIP2 (ab18465; 1:250), TBR1 (ab31940; 1:500) and CUX1 (ab54583; 1:200) were from Abcam. The antibodies to OCT3/4 (sc5279; 1:22) and LIFR (sc-515337; 1:100) were from Santa Cruz. The antibody to PAX6 (supernatant, 1:22) was from DSHB. The antibodies to SOX1 (AF3369; 1:40), SOX2 (AF2018; 1:100) and OLIG3 (MAB32456; 1:450) were from R&D. The antibodies to NR2F1 (ABE1425; 1:500), DCX (AB2253; 1:500) and LMX1A (AB10533; 1:1,000) were from Millipore. The antibodies to SP8 (HPA054006; 1:50) and MEF2C (HPA005533; 1:100) were from Atlas Antibodies. The antibodies to CASP3 (cat. no. 9661; 1:500) and TCF7L2 (cat. no. 2569; 1:500) were from Cell Signaling. The antibody to TTR (AHP1837; 1:500) was from Bio-Rad. The antibodies to HOPX (HPA030180; 1:500), PTPRZ1 (HPA015103; 1:500) and EMX1 (HPA006421; 1:50) were from Sigma-Aldrich. Secondary Alexa Fluor antibodies 488, 546 and 647 (1:700) were obtained from Invitrogen.
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