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1

Volatile Compounds in Fruit Products

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All analyses were performed in triplicate (n = 3). The results obtained were subjected to statistical analysis using STATISTICA 13.3 software (Statsoft, Inc., Tulsa, OK, USA) and expressed as mean ± standard error of the mean. Either a one- or two-way analysis of variance was performed. The significance of the differences between the means was estimated based on Tukey’s post-hoc test at p < 0.05.
The effect of the fruit pre-treatment method on the content of volatile compounds in the finished product was investigated using the Principal Component Analysis (PCA). The PCA was used for those groups of volatiles whose individual components were most highly correlated. It was performed using STATISTICA 13.1 software (Statsoft, Inc., Tulsa, OK, USA).
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2

Triplicate Experiments with ANOVA Analysis

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In current studies, all experiments were triplicated and each run was measured in three technical repetitions. Mean values and standard deviations were then calculated by Statistica 13.3 (Statsoft, Tulsa, OK, USA). Prior to analyse difference between tested groups a one-way ANOVA significance test was performed using Statistica 13.3 (Statsoft, USA), comparing only two groups each time.
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3

Relative Gene Expression Analysis

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The results are shown as the arithmetic means ±SD from three independent biological replicates. The results were evaluated with two-way analysis of variance (ANOVA) (factors: infection and duration of infection). A post hoc Tukey’s test was implemented to determine significant differences between means at p < 0.05 (Statistica 13.3; StatSoft Inc., Tulsa, OK, USA). The gene transcript level of each gene was tested in three biological replicates and three technical repetitions. The specificity of amplified PCR products was verified by melting curve analysis. For statistical analysis, the calculation of reaction efficiency was performed using LinRegPCR software version 2020.0.0.0.3 (http://LinRegPCR.nl), whereas the relative gene expression levels and statistical significance of their differences were estimated by Relative Expression Software Tool 2009 (REST 2009) (http://rest.gene-quantification.info/) as described previously [30 (link)] and confirmed using Student’s t-test and Fisher’s F-test (Statistica 13.3; StatSoft Inc.).
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4

Sous-Vide Cooking Effects on Meat Quality

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The data were analyzed as a completely randomized design using a 2-way ANOVA concerning the time of sous-vide cooking (4, 6, and 12 h) and temperature of sous-vide cooking (60°C, and 80°C) as a factorial design (3 × 2) (written in the table as a-f), according to the following linear model: Yij = μ + Ai + Bj + (AB)ij + eij, where Yij = value of trait (the dependent variable); μ = overall mean; Aj = effect of time of sous-vide cooking; Bj = effect of temperature of sous-vide cooking; (AB) = interaction, and eij = random observation error, using Statistica®13.3 software (Statsoft Inc., 2019 ). Moreover, it was made also 2-way ANOVA concerning the heat treatment (time x temperature) of sous-vide cooking and kind of meat (with and without skin) as a factorial design (6 × 2) (written in the tables as x-y), according to the following linear model: Yij = μ + Ai + Bj + (AB)ij + eij, where Yij = value of trait (the dependent variable); μ = overall mean; Aj = effect of heat treatment (time × temperature); Bj = effect of kind of meat (with skin and without skin); (AB) = interaction, and eij = random observation error, using Statistica 13.3 software (Statsoft Inc., 2019 ). The statistical significance of the differences between the averages of the groups was calculated using Tukey's test and was at a level of P≤0.05. The tables present the average values and their standard deviation.
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5

Comparative Analysis of Propolis Antioxidant Profiles

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Statistical analysis was performed in Statistica 13.3 software (StatSoft Power Solutions, Inc./Dell, Round Rock, TX, USA). Analyses include Pearson-correlation tests (between DPPH, FRAP, ORAC, TPC and TFC) and principal component analysis. Principal component analysis was performed in the matrix correlation model. DPPH, FRAP, ORAC, TPC, and TFC were used as variables. All data was normalized before PCA.
Comparison and classification of propolis chemical compositions were performed by cluster analysis based on Pearson correlation and complete linkage clustering by Statistica 13.3 software (StatSoft Power Solutions, Inc./Dell, Round Rock, TX, USA). Matrix consisted of normalized UV peak areas (see Section 2.3).
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6

Metabolic and Behavioral Responses to Nutritional Status

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Results are presented as mean ± SEM. Differences in body weight, body length, food intake, body composition and density of AgRP fibers were analyzed using a mixed model (SAS/Stat 14.1, SAS Institute Inc., Cary, USA). Data of ghrelin levels and mRNA expression were analyzed using two-way ANOVA (factors: age and nutritional status), followed by planned comparisons (Statistica 13, StatSoft) and corrected by Holm-bonferroni correction. For oral glucose tolerance tests and metabolic changes, Repeated Measures ANOVA was used (Statistica 13, StatSoft). Significance was accepted at the 5% level.
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7

Antioxidant and Sensory Effects of Oyster Mushrooms

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All tests and experiments were conducted three times, and the results are presented as the average value ± the standard deviation (SD). Statistical analyses of the data were carried out using the Statistica 13.1 software (StatSoft Polska, Krakow, Poland). A significance level of p < 0.05 was used, and the analysis involved employing a one-way analysis of variance along with Tukey’s post hoc test [76 ].
The impact of the addition of oyster mushrooms on the antioxidant activity, oxidative changes, and selected sensory evaluation parameters in the final product was examined using Principal Components Analysis (PCA). The PCA was used for groups in which individual characteristics were most strongly correlated. The Statistica 13.1 program (StatSoft Polska, Krakow, Poland) was used for execution.
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8

Antioxidant and Sensory Effects of Oyster Mushrooms

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All tests and experiments were conducted three times, and the results are presented as the average value ± the standard deviation (SD). Statistical analyses of the data were carried out using the Statistica 13.1 software (StatSoft Polska, Krakow, Poland). A significance level of p < 0.05 was used, and the analysis involved employing a one-way analysis of variance along with Tukey’s post hoc test [76 ].
The impact of the addition of oyster mushrooms on the antioxidant activity, oxidative changes, and selected sensory evaluation parameters in the final product was examined using Principal Components Analysis (PCA). The PCA was used for groups in which individual characteristics were most strongly correlated. The Statistica 13.1 program (StatSoft Polska, Krakow, Poland) was used for execution.
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9

DART-TOF/MS Analysis and PCA for Metabolite Profiling

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All results were expressed as the mean values ± standard deviation. Statistical analysis was performed using software STATISTICA 13.1 (StatSoft Inc., Tulsa, OK, USA). Analysis of the variance (ANOVA) and Fisher’s least significant difference (LSD) with the significance defined at p < 0.05 were used for data analysis.
For grouping the data obtained by DART-TOF/MS analysis according to the m/z for a given abundance threshold, a macro was created in Excel 2016 (Microsoft). A detailed description of the work in the macro is described elsewhere [65 (link)]. The created table was ranked according to m/z descending, and thus, the assembled matrix was used for the principal component analysis (PCA) using STATISTICA 13.1 (StatSoft, Inc.). For statistical processing using PCA, 1000 of the most significant masses were taken in both positive and negative modes. The threshold (minimum abundance) for masses in positive mode was 5000 and in negative mode was 70,000.
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10

Statistical Analysis of Enzymatic Protein Hydrolysis

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The software Statistica 13.4 (Statsoft Inc.) and GraphPad Prism (version 8.03, for Windows, GraphPad Software, La Jolla, CA, United States) were used for all statistical analysis. Data were tested for normality and homogeneity of variance using a Kolomogorov-Smirnov test and Shapiro-wilk test, respectively. Data from protein DH% from enzyme extract standardisation were transformed to arcsin (x1/2) before statistical analysis. Enzymes dilution (DH%) data were subjected to two way full-factorial ANOVA followed by Duncan’s Multiple Range Test at significance level of 95% using SAS 9.4 (SAS Institute Inc.) software for Windows (SAS, 2013, Institute, Cary NC). In vitro amino acid solubility data were subjected to two-way analysis of variance (ANOVA) with diet and enzyme effect as two factors. One-way ANOVA was performed to analyze any significant difference between diets for each enzyme, followed by Tukey’s multiple comparison. The in vivo digestibility data were analysed using t-test to compare between test diet and reference diet. For all statistical tests, p-values < 0.05 were considered significant, and all the results are expressed as mean ± standard deviation. Figures and graphs were obtained by using GraphPad Prism (version 8.03, for Windows, GraphPad Software, La Jolla, CA, United States).
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