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13 protocols using triad series multimode detector

1

Colorimetric G6PD Activity Assay

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G6PD activity was measured in cell extracts of OVCAR5 parental and OVCAR5 CBPR (2.0 × 106 cells) cells using a colorimetric based assay (MAK015, Sigma Aldrich). Cell pellets was resuspended in 50µL of PBS and diluted 1/10 in assay buffer. All standards and positive controls were prepared according to the manufacturer’s instructions. Absorbance values were measured at 450 nm using Triad series multimode detector after 15 min (Dynex technologies, USA).
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2

ROS Detection with DCF-dAc Fluorescence

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Intracellular ROS were detected using 2,7-dichlorofluorescin diacetate (DCF-dAc), a membrane-permeable tracer that is oxidized by various types of ROS. For this, 100 μM of DCF-dAc was added to cells that had been cultured as described above, and incubated in the dark for 30 min at 37°C. The cells were washed twice with phosphate-buffered saline (PBS). Fluorescence was measured using a fluorescent microplate reader (TRIAD Series Multimode Detector; Dynex Technologies, Inc., VA, USA) with an excitation wavelength of 485 nm and an emission wavelength of 530 nm.
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3

Carboplatin Cytotoxicity and Proliferation Assay

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Cells (5000 cells/well) were plated in 96-well plates in RPMI growth medium. After 24 h, cells were treated with increasing concentrations of carboplatin (Hospira Pty Ltd, 5–200 µM). Cell survival was assessed by MTT assay after 72 h as per manufacturer’s instructions (Sigma Aldrich). Absorbance was read at 595 nm on a microplate absorbance reader (Triad series multimode detector, Dynex technologies, Chantilly, VA, USA). GraphPad Prism (version 8.0.0) was used to calculate the IC50 of carboplatin in both OVCAR5 and OVCAR5 CBPR cells.
For proliferation assay, serial dilution of OVCAR5 parental and OVCAR5 CBPR cells was prepared and seeded at a density ranging from 5 × 102 to 1 × 105 per well in a 96-well plate and incubated overnight. Tetrazolium salt from the Cell Proliferation Kit I (MTT) (Roche Diagnostics, Risch-Rotkreuz, Switzerland) was then added to the wells at a final concentration of 0.5 mg/ml. The microplate was incubated for 4 h before 10 μl of solubilization solution was added into each well to aid complete solubilization of formazan crystals produced by metabolically active cells. Following an overnight incubation, the absorbance reading was taken at 595 nm on an iMark™ microplate absorbance reader (Bio-Rad Laboratories, Hercules, CA, USA).
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4

Quantitative Cell Migration Assay

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Approximately 1 × 106 cells/mL were suspended in MEM media supplemented with 0.1% (v/v) BSA and incubated with 1 μg/mL of fluorogenic calcein-AM (Invitrogen) for 30 min at room temperature in the dark. Cells were then centrifuged at 1,500 rpm for 5 min, washed three times with MEM supplemented with 0.1% (v/v) BSA, and resuspended at the density of 8 × 105 cells/mL with MEM containing 0.1% (v/v) BSA. Afterwards, 4 × 104 cells were suspended in 49 mL of MEM before placing onto the filter (12-µm pore size) of 96-well ChemoTx® chemotaxis system (Neuro Probe), which was pre-coated with Geltrex (Life Technologies). Cells were allowed to migrate from the filter to the bottom compartment containing 29 µL of MEM supplemented with 10% (v/v) FBS at 37°C for 6 h. The non-migrated cells on the top of the filter were gently removed with a paper towel before the fluorescence intensity generated from the calcein-labeled cells in the bottom compartment was measured with excitation and emission wavelength at 485 and 520 nm, respectively, in a Triad series multimode detector (Dynex Technologies).
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5

Motility and invasion assays for ovarian cancer cells

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The ChemoTx® 96-well plate (Neuroprobe, Gaithersburg, MD, USA) was used to assess motility of transfected OVCAR-3 and OV-90 cells. Addition of an even spread of dried 0.6 µL Geltrex (Gibco, Waltham, MA, USA) diluted 1:1 with media (RPMI1640 + 0.1% BSA) on the filter membrane was used to determine invasion. Briefly, cells were labelled with calcein AM (Life Technologies, Mulgrave, VIC, Australia) after 30 min of incubation in the dark on a nutator. Excess calcein AM were removed by washing the cells twice with media (RPMI1640 + 0.1% BSA). Portions of 4 × 104 cells were then pipetted onto each pore of the filter above a microplate containing wells prefilled with chemoattractant (10% FCS) and media (RPMI1640 + 0.1% BSA). Reverse pipetting was employed at every step to prevent bubble entrapment. After a 6-hour, 37 °C incubation, cells that had migrated or invaded the filter were measured using the Triad series multimode detector (Dynex Technologies, Chantilly, VA, USA) at 485–520 nm. Assays were carried out in biological triplicate and had technical replicates to a total of n = 21–24 per cell line per construct transfected. Statistical analysis was carried out on GraphPad Prism 8 first by Shapiro−Wilk test of normality followed by either Mann−Whitney U test (non-normal distribution) or unpaired t-test (normal distribution).
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6

Quantifying Cellular Alkaline Phosphatase

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After culturing cells according to the above method and washing with PBS, a tartrate-resistant acid phosphatase (TRAP) assay was performed according to the manufacturer’s instructions (Sigma Chemical Co.). AP assay buffer was added to the cells and incubated at 37°C for 2 h. The AP stop buffer was added to stop the reaction, and the absorbance was read at 410 nm with a TRIAD Series Multimode Detector (Dynex Technologies Inc.).
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7

OVCAR-5 Cell Motility Assay

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OVCAR-5 cell motility was assessed using a ChemoTx® 96-well plate (Neuroprobe, Gaithersburg, MD, USA), as previously described [29 (link)]. Briefly, cells were labelled with calcein AM (1 µg/mL, Life Technologies, Mulgrave, VIC, Australia) for 30 min in the dark on a nutator. Excess calcein AM was removed by washing with media (RPMI1640 + 0.1% BSA). A concentration of 40,000 cells/50 µL were loaded onto uncoated 12 µm filter inserts. The cells were allowed to migrate for 6 h to the bottom well with chemoattractant (10% FBS) and media (RPMI 1640 + 0.1% BSA). Migrated cells were measured using the Triad series multimode detector (Dynex Technologies, Chantilly, VA, USA) at 485–520 nm. Assays were carried out in biological quadruplicate in 2–3 independent experiments.
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8

Nitrite Assay for NO Production

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Nitrite accumulation in the culture medium was considered to be an indication of NO production as described previously (Green et al. 1982 (link)). RAW 264.7 cells were seeded in 96-well plates at 1 × 104 cells per well overnight. Cells were stimulated for 48 h with LTA from probiotic Bacillus strains at three concentrations (0.1, 1 and 10 µg/mL). 0.8 mL of Griess reagent (0.5 % sulfanilic acid, 1.4 % acetic acid, and 0.008 % naphtylethylenediamine) was mixed with culture supernatants. The optical density was determined at 535 nm (Libra S12, Biochrom, UK) by comparison with a NaNO2 standard curve. A negative control with 5 mM sodium acetate buffer (pH 4.7) and two positive controls with commercial LPS from Escherichia coli K12 (InvivoGen, France) and commercial LTA from S. aureus (InvivoGen) were used.
LTA cytotoxicity was assessed by adding 3-[4,5-dimethylthiazol-2yl]-2,5-diphenyltetrazolium bromide solution (MTT, Sigma-Aldrich, USA) at a final concentration of 0.5 mg/mL in each well for 3 h at 37 °C in a humidified atmosphere containing 5 % CO2. Afterwards, supernatants were removed and formazan crystals were dissolved with 200 µL DMSO. Absorbance was measured with a microplate spectrophotometer at 595 nm (TRIAD series Multimode Detector, Dynex, USA) and compared to controls (data not shown).
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9

Intracellular ATP Content Assay

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WRL68 cells were seeded in a 25 cm2 flask at a density of 1.0 x 106 cells/flask and allowed to grow for 24 h. The cells were then treated with H2O2 for 30 min and post-incubated for 2 h in fresh medium (Fig 1). After this, the cells were recovered, centrifuged at 300 g for 10 min and washed with PBS. Intracellular ATP was extracted using the boiling water procedure described by Yang and coworkers [34 (link)]: 400 μl of boiling water was added to each cellular pellet, which was subsequently vortexed and incubated for 5 min; the resulting suspension was centrifuged at 12000 g for 5 min. ATP content in the supernatant was determined using the Adenosine 5’-triphosphate (ATP) Bioluminescent Assay Kit (Sigma, cat # FLAA-1KT) according to the manufacturer’s instructions. Luminescence was measured from 96-well plates using a microplate reader (TRIAD series multimode detector, Dynex Technologies, Chantilly, VA) and the quantity of ATP was calculated using a standard curve. Proteins were measured using the Bradford method (Biorad). ATP content was expressed as nmol per mg of total protein.
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10

Quantifying Cytotoxicity in C6 Cells

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C6 cells were transfected with control-plasmid and SIP-plasmid for 2 hours prior to treatment with 500 μM MPP+ for 24 hours. Then, we used the LDH in vitro toxicology assay kit (TOX-7, Sigma-Aldrich, St. Louis, MO, USA) to measure the amount of cytoplasmic LDH released into the culture medium. A TRIAD Series Multimode Detector (Dynex Technologies Inc., Chantilly, VA, USA) was used to detect the absorbance at 490 nm. The calculated value was the relative intensity of absorbance compared to the control cells.
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