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Rabbit anti gapdh

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Rabbit anti-GAPDH is a primary antibody that specifically recognizes the glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein. GAPDH is a housekeeping gene that is commonly used as a loading control in Western blotting and other immunoassays.

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13 protocols using rabbit anti gapdh

1

Integrin-Mediated Cellular Adhesion Analysis

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Mouse anti-paxillin (BD 610052); rat anti-active integrin β1 (9EG7; BD 553715); rabbit-anti-Tom20 (Santa Cruz sc-11415); mouse-anti-MYH1/2 (Santa Cruz sc-53088); rabbit anti-fibronectin (Santa Cruz sc-9068); rabbit anti-GAPDH (GeneTex GTX100118); rabbit anti-β-actin (GeneTex GTX100313); rabbit anti-integrin β1 (GeneTex GTX128839); rabbit anti-paxillin (GeneTex GTX125891); rabbit anti-pY397-FAK (GeneTex GTX129840); rabbit anti-kinesin-1 (Abcam AB167429); rabbit anti-GFP (Abcam AB290); mouse anti-α-tubulin (Sigma T5168); mouse anti-MYH2 (Thermo Fisher 14-6503-80); rabbit anti-FAK (Thermo Fisher AHO0502); Alexa Fluor 488 phalloidin (Thermo Fisher A12379); Alexa Fluor 568 phalloidin (Thermo Fisher A12380); Alexa Fluor 488-anti-rabbit IgG (Thermo Fisher A11034); Alexa Fluor 488-anti-mouse IgG (Thermo Fisher A11029); Alexa Fluor 488-anti-rat IgG (Thermo Fisher A11006); Alexa Fluor 568-anti-rabbit IgG (Thermo Fisher A11036); Alexa Fluor 568-anti-mouse IgG (Thermo Fisher A11031); DAPI (Thermo Fisher D1306); Mitotracker Red (Thermo Fisher M7512); HRP-AffiniPure mouse anti-rabbit IgG (Jackson ImmunoResearch 211-032-171); and HRP-AffiniPure goat anti-mouse IgG (Jackson ImmunoResearch 115-035-174).
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2

Immunoblotting of Cellular Proteins

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Cells were collected, washed with PBS, and then lysed in cell disruption buffer (Ambion) containing inhibitors of phosphatases and proteases (PhosphoSTOP and Complete, Roche). Proteins were separated by SDS/PAGE in 4–20% Tris-HEPES gradient gels (BioRad), and transferred to nitrocellulose membranes (GE Healthcare). The membranes were saturated with 3% bovine serum albumin prepared in TBS (50 mM TRIS-Cl, pH 7.5, 150 mM NaCl)-0.01% Tween-20 and then incubated overnight with the following antibodies: mouse anti-OPA1 (BD Biosciences, 1:1000), mouse anti-G6PD (Santa Cruz Biotechnology, 1:1000), rabbit anti-phospho-4EBP (Cell Signaling Technology, 1:1000), rabbit anti-non phospho-4EBP (Cell Signaling Technology, 1:1000), rabbit anti-PARP (Cell Signaling Technology, 1:1000) and rabbit anti-GAPDH (GeneTex International Corp., 1:10000). Membranes were then washed twice and incubated for 1 h with an HRP-conjugated anti-mouse or anti-rabbit antibody (Thermo Fisher Scientific, 1:5000). Chemiluminescent signals were detected using Lite Ablot Turbo (EuroClone) and a Cambridge UVITEC imaging system.
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3

Western Blot Analysis of Protein Targets

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Cultured cells were harvested and resuspended in lysis buffer (20 mM Tris/Cl pH 8.0, 150 mM NaCl, 5 mM EDTA, 1% NP-40, 2% SDS). For extract preparation from flies or embryos, whole animals were homogenized in lysis buffer, followed by extensive centrifugation. Protein concentration of cleared lysates was determined using the BioRad protein assay reagent. Equal amounts of total protein were subjected to western blotting using the following antibodies: rabbit anti-Ssx (1:1000, described above), mouse anti-HA (1B8, Sigma Aldrich, 1:1000), monoclonal mouse anti-Sxl (M18, developed by P. Schedl, obtained from the Developmental Studies Hybridoma Bank (DHSB), created by the NICHD of the NIH and maintained at The University of Iowa, Department of Biology, Iowa City, IA52242), polyclonal rabbit anti-Sxl (15 (link), a gift from M. Hentze), mouse anti-beta-tubulin (E7, deposited to the DSHB by M. Klymkowsky), rabbit anti-GAPDH (GeneTex, 1:1,000), HRP-coupled anti-rabbit and anti-mouse light chain-specific secondary antibodies (1:10 000, Jackson Immuno Research). Detection occurred by using Clarity Western ECL substrate and the ChemiDoc Touch Imaging System (BioRad).
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4

Protein Extraction and Western Blot Analysis

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For protein extraction from S2R+ cells, cell lysates were extracted in lysis buffer (50 mM TrisCl, pH 7.6, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100) with protease inhibitor cocktail (Roche) and phosphatase inhibitor cocktail (Roche). For protein extraction from adult flies, one-day-old flies were collected, and proteins were extracted in lysis buffer with protease inhibitor cocktail (Roche) and phosphatase inhibitor cocktail (Roche). Protein concentrations of the cleared lysate after two times centrifugation (13,000 r.p.m.) at 4 °C were measured, and the same amount of proteins was used for western blot analysis.
For immunostaining of western blots, following antibodies were used: mouse anti-V5 (1:5000, Invitrogen R960-25), mouse anti-Myc (1:1000, Santa Cruz sc-47694), rabbit anti-CCT4 (1:20,000) (this study), rat anti-CCT1 antibody (1:1000, Abcam ab90357), rat anti-Rheb (1:500) [48 (link)], and mouse S6K (1:1000) [40 (link)], rabbit phospho-S6K (1:1000, Cell signaling 9209), rabbit phospho-S6 (1:5000) [49 (link)], rabbit anti-Histone 3 (1:10,000, Millipore 05-928), rabbit anti-GAPDH (1:5000, GeneTex 100118), rabbit anti-Akt (1:1000, Cell Signaling 4691), rabbit anti-phospho-Akt (1:1000, Cell Signaling 4054), mouse anti-Tubulin (1:5000, Sigma T5168), guinea pig anti-TOR (1:2000) [50 (link)], rat anti-TOR (1:2000) [51 (link)].
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5

Western Blotting of SARS-CoV-2 Proteins

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Western blotting was performed as previously described (Wu et al., 2009 (link)). In brief, cell lysates were harvested in 1X RIPA buffer (Merck Millipore) containing 1X proteinase inhibitor (Merck Millipore) and 1X phosphatase inhibitor (Calbiochem). Protein samples were added to 4X SDS loading dye and denatured for 10 min at 95°C. Proteins were separated on 10% SDS-PAGE gels and transferred to polyvinylidene difluoride (PVDF) membranes. Membranes were blocked with 5% milk in 1X TBST prior to incubation with primary antibodies at 4°C overnight. Membranes were then reacted with a secondary antibody. Antigen-antibody complexes were visualized using Western Lightning Plus-ECL (PerkinElmer). The antibodies used for western blot analysis were as follows: rabbit anti-SCoV/SARS-CoV-2 (COVID-19) spike (generated by our laboratory), rabbit anti-SCoV/SARS-CoV-2 nucleocapsid (generated by our laboratory), mouse anti-SARS-CoV/SARS-CoV-2 (COVID-19) spike [1A9] (Genetex, GTX632604), rabbit anti-integrin alpha V (Genetex, GTX54357), rabbit anti-GAPDH (Genetex, GTX100118), mouse anti-HA (LTK BioLaboratories), horseradish peroxidase-conjugated mouse IgG (Genetex, GTX213111-01) and rabbit IgG (Genetex, GTX213110-01).
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6

Antibodies for Renal Protein Analysis

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The following primary antibodies were used: anti-AQP2 (7661AP) was kindly provided by Prof. Sebastian Frische; immunofluorescence (IF) and immunoblotting (IB) 1:1,000; rabbit anti-Ki67 (#4203–1, Epitomics, Cambridge, United Kingdom) IF 1:500; anti-B1/2 H+ATPase (#sc-55544, Santa Cruz, Dallas, TX, United States) IF and IB 1:1,000; rabbit anti-NKCC2 (#AB3562P, Millipore, Dramstad, Germany) IF and IB 1:1,000; rabbit anti-β1 integrin (#04-1109, Millipore, Dramstad Germany) IB 1:1,000; rabbit anti-ENaC alpha (SPC-403, StressMarq, Victoria, BC, Canada) IB 1:1000; mouse anti-β-Actin (#A2066 Sigma, Milan, Italy) IB 1:20,000; rabbit anti-GAPDH (#10018 GeneTex, Hsinchu City, Taiwan) IB 1:20,000. The following secondary antibodies were used: goat anti mouse Alexa Fluor 488 IF 1/800 (Invitrogen, CA, United States) goat anti-rabbit Cy3 (A10520, Invitrogen, CA, United States) IF 1:500; anti-mouse HRP conjugated (NA931V GE Healthcare, Little Chalfont, United Kingdom) IB 1:2,000; anti-rabbit HRP conjugated (NA934V GE Healthcare, Little Chalfont, United Kingdom) IB 1:2,000.
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7

Immunoblot Assay for OLA1 Protein

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After cells were transfected with the indicated siRNA duplexes for 42 h, cells were lysed with RIPA buffer and 200 μg cell lysates were used for the immunoblot assay. To perform the immunoblot assay, OLA1 was detected using rabbit anti-OLA1 antibodies (Abcam Inc., Cambridge, UK) and GAPDH (internal loading control) using rabbit anti-GAPDH (Genetex Inc., Irvine, CA, USA), and they were visualized by chemiluminescence (Genetex Inc., Irvine, CA, USA) and imaged with a ChemiDoc-It® 815 Imager (Analytik Jena, An Endress + Hauser Company, Jena, Germany) after incubation with HRP-conjugated secondary antibodies (Genetex Inc., Irvine, CA, USA).
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8

Small Molecule Inhibitors in Cell Signaling

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Small molecule inhibitors are as follows: everolimus, dasatinib, duvelisib, alisertib, ibrutinib, idelalisib, sorafenib, metformin, and entospletinib (Selleckchem, Houston, TX; further information in Additional file 1: Table S1). All chemicals were from Sigma-Aldrich (St. Louis, MD) unless otherwise noted. Primary antibodies are as follows: rabbit anti-ATF-4 (#11815), -ATF-6 (#65880) and –β-tubulin (#2128) and mouse-anti-DDIT3/CHOP (#2895) (Cell Signaling Technology, Danvers, MA), rabbit anti-GAPDH (#100118; GeneTex, Irvine, CA), mouse anti-HSP70 (#648001; BioLegend, San Diego, CA), goat anti-Lamin-B (#SC-6217; Santa Cruz Biotechnology, Dallas, TX). Secondary antibodies are as follows: HRP-conjugated goat anti-rabbit (#111-035), goat anti-mouse (#115-035), and donkey anti-goat (#705-035) IgG antibodies (Jackson Immunoresearch, West Grove, PA).
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9

Western Blot Analysis of Kv1.1 and GAPDH

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Cells were washed twice with ice-cold PBS [(in mM) 137 NaCl, 2.7 KCl, 4.3 Na2HPO4. 2H2O, 1.4 KH2PO4, pH 7.3] supplemented with 2 mM EDTA, and resuspended in a lysis buffer [(in mM) 150 NaCl, 5 EDTA, 50 Tris-HCl pH7.6, 1% Triton X-100) containing a protease inhibitor cocktail (Roche Applied Science). After adding the Laemmli sample buffer to the lysates, samples were sonicated on ice and heated at 70 °C for 5 min. Samples were then separated by 15% SDS-PAGE, electrophoretically transferred to nitrocellulose membranes, and detected using rabbit anti-GAPDH (1:5000; GeneTex), rabbit anti-Kv1.1 (1:2500; Upstate), or mouse anti-Myc (clone 9E10) antibodies. Blots were then exposed to horseradish peroxidase-conjugated anti-mouse/rabbit IgG (1:5000; Jackson ImmunoResearch), and revealed by an enhanced chemiluminescence detection system (Thermo Scientific). Results shown are representative of at least three independent experiments. Densitometric scans of immunoblots were quantified by using ImageJ (National Institute of Health).
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10

Drosophila Model of Tau Pathology

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UAS-TauWT and UAS-TauR406W transgenic flies, as previously described in Wittmann et al. 2001, were crossed with the pan-neuronal expression driver elav-GAL4 to generate experimental animals with the genotype elav-GAL4/+;UAS-TauWT/+ or elav-GAL4/Y;UAS-TauWT/+ (elav > TauWT) and elav-GAL4/+;UAS-TauR406W/+ or elav-GAL4/Y;UAS-TauR406W/+ (elav > TauR406W), respectively. These flies express the human Tau 0N4R isoform (383 amino acids). For control animals, we used the genotypes: elav-GAL4/+ and elav-GAL4/Y. All flies were raised on standard molasses-based Drosophila media at 25 °C with ambient light conditions, and aged to 1-, 10-, or 20-days following eclosion. We confirmed expression of Tau at similar levels in elav > TauWT and elav > TauR406W flies using western blot analysis, as previously described [31 (link)] using the following antibodies: rabbit anti-Tau (1:5000, Dako); rabbit anti-GAPDH (1:5000, GeneTex) and HRP-conjugated anti-rabbit (1:10000, Santa Cruz).
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