The largest database of trusted experimental protocols

128 protocols using ab23981

1

Bone Development in miR-29cb2 Knockout Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
miR-29cb2−/− mice were sacrificed at the ages of 6 and 16 weeks. The femurs were collected, fixed with 4% PFA, decalcified and cut into 6 μm thick transverse sections. HE (Servicebio), an anti-Runx-2 antibody (rabbit; 1:1000; ab23981; Abcam), Anti-Sp7 / Osterix antibody (Rabbit; 1:1000; ab209484; Abcam) and Trap (Servicebio) were used for morphological examination. anti-HIF-1β (rabbit; 1:1000; ab2771; Abcam) and anti-HIF-3α (rabbit; 1:14000; NBP1-03155; Novus) were used for target examination. Digital images showing each antigen were acquired and evaluated using Image-Pro Plus software.
+ Open protocol
+ Expand
2

SaOS-2 Cell Culture and Reagent Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
SaOS-2 cell was kept in the laboratory. GKC (20180521) was obtained from Guizhou Wei Kang Zi Fan Pharmaceutical Co. Ltd. (Guiyang, China). Jiegu-Qili tablet was obtained from Hunan Jin Sha Pharmaceutical Co. Ltd. (Changsha, China). Pentobarbital Sodium (6900183) was purchased from Beijing Solarbio Science & Technology Co. Ltd. Penicillin G Sodium (170907) was from Lukang Pharmaceutical Co. Ltd. (Jining, China). ALP (A059-2), Pi (C006-3), and Ca (C004-2) were supplied by Nanjing Jiancheng Biotechnology Co. Ltd. (Nanjing, China). Primers of ALP, COL-I, OTC, Osterix, RUNX2, BMP2, OPN, OPG, RANKL, and GAPDH were obtained from Shanghai Generay Biotech Co. Ltd. (Shanghai, China). Antibodies against RUNX-2 (ab23981), OPG (ab73400), BMP2 (ab14933), RANKL (ab9957), β-catenin (ab6302), Smad4 (ab40759), GAPDH (ab8245), and GSK3β (ab93926) were from Abcam (Cambridge, England). DKK1 (PHC9214), Noggin (PHC1506), antibodies against Smad1/5 (PA5-80036), and p-Smad1/5 (MA5-15124) were obtained from Thermo fisher (American). p-GSK3β (Ser9, 9336S) antibody was got from Cell Signaling Technology (American). All other reagents used in the present study were of analytical grade.
+ Open protocol
+ Expand
3

Osteogenic Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
BMSCs were lysed, and the protein concentration was measured by BCA method (Thermo Fisher Scientific) and adjusted by radioimmunoprecipitation (Beyotime, China). The proteins were separated by SDS-PAGE at 30 μg/lane concentration, and transferred to a PVDF membrane (Millipore, Bedford, MA, USA). After this, the membrane was soaked in 5% skimmed milk for 1 h at 25°C, and incubated overnight at 4°C with the antibodies against RUNX2 (ab23981, Abcam, UK), ALP (ab229126, Abcam), NNMT (ab119758, Abcam), and GAPDH (ab9485, Abcam). After washing with PBS, the membrane was incubated at 37°C for 1 h in appropriate secondary antibody. Finally, the relevant protein bands were detected using ECL kits (Santa Cruz, USA) and the expression profiles of different proteins were analyzed using Image J Software (Version 1.38; NIH, USA). GAPDH was used as an internal control.
+ Open protocol
+ Expand
4

Immunofluorescence Analysis of Bone Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The levels of Runx2, osterix, OCN, and Col-1α proteins in each sample were evaluated by immunofluorescence at week 4 post-operation. Deparaffinized sections were rehydrated with deionized water, retrieved using sodium citrate buffer, and blocked with 10% non-specific binding goat serum. Further, sections were incubated with primary antibodies against Runx2 (Abcam, ab23981, 1:200), osterix (Abcam, ab22552, 1:200), OCN (Abcam, ab13420, 1:200), and Col-1α (Abcam, ab34710, 1:500) overnight at 4 ​°C. The samples were further incubated with fluorescent dye-conjugated secondary antibodies and counterstained with DAPI. Images were obtained using a laser confocal scanning microscope (Nikon A1R, Tokyo, Japan).
+ Open protocol
+ Expand
5

Western Blot Analysis of Runx2 and Osx

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed using RIPA buffer (Thermo scientific, USA) containing a protease inhibitor cocktail (Roche, Switzerland). Equal amounts of protein from each sample were added to a NuPage Bis-Tris polyacrylamide gel (Invitrogen, USA) and run for 2 h using MES SDS running buffer (Invitrogen, USA). The proteins were then transferred to nitrocellulose membranes, which were blocked for 5 h at room temperature with milk (5% w/v) in Tris-buffered saline (TBS) containing Tween-20 (0.1%; TBS-T). The blots were subsequently incubated overnight with a primary antibody (1: 2,000) against Runx2 or Osx at 4 °C with oscillation, after which they were incubated with a horseradish peroxidase-conjugated secondary antibody (1: 10,000; Jackson, USA). The secondary antibodies were detected and visualized using the Super Signal West substrate (Fisher Scientific, USA). The resultant bands were quantified through densitometry with Image J software. The information of antibodies in detail showed as follows. Runx2 antibody (Abcam, ab23981, USA); Osx antibody (Abcam, ab22552, USA); Hmga2 antibody (Cell signal technology, #8179, USA).
+ Open protocol
+ Expand
6

Immunostaining of Osteogenic Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Slides were permeabilized with 0.5% Triton X-100. After antigen
retrieval, blocking was carried out with 5% goat serum (S-1000, Vector) for 1h
at room temperature. Slides were incubated with primary antibodies at 4°C
overnight. Primary antibodies included anti-Osterix (ab22552, Abcam), anti-Runx2
(ab23981, Abcam) and anti-Cathepsin K (ab19027, Abcam). Following PBS washing,
slides were incubated with Cyanine5 conjugated goat anti-rabbit secondary
antibody (A10523, Invitrogen) for 1h at room temperature, then mounted with DAPI
mounting medium (Vector Laboratories).
+ Open protocol
+ Expand
7

Immunofluorescence Analysis of Runx2

Check if the same lab product or an alternative is used in the 5 most similar protocols
The samples were fixed with 4% paraformaldehyde, followed by incubation with 1% Triton X-100 and 3% BSA. Subsequently, the related primary antibody (Runx2, ab23981, Abcam, UK) were used to incubated with the samples overnight. After that, secondary antibody was utilizing to incubate the samples before staining with FITC-labeled phalloidin and DAPI. The samples were observed by laser scanning confocal microscope.
+ Open protocol
+ Expand
8

Immunofluorescence Staining of VICs

Check if the same lab product or an alternative is used in the 5 most similar protocols
After culturing on hydrogels for 48 hours, VICs were fixed using 4% wt/vol paraformaldehyde (PFA, Thermo Fisher) in PBS. After 20 minutes, the PFA solution was removed, and cells were permeabilized using 0.1% Triton-X-100 (Fisher Scientific) in PBS for one hour then blocked with 5% bovine serum albumin (BSA, Sigma-Aldrich) overnight at 4°C. The following day, VICs were treated with a mouse anti-αSMA primary antibody (Abcam, 1:300 dilution, ab7817) and a rabbit anti-RUNX2 primary antibody (Abcam, 1:250 dilution, ab23981). One hour later, VICs were washed twice with PBS with 0.05% vol/vol Tween20 (Sigma) then treated with a staining solution containing goat anti-mouse Alexa Fluor 488 at a 1:300 dilution (Life Technologies), goat anti-rabbit Alexa Fluor 647 at a 1:300 dilution (Life Technologies), 4’-6-diamidino-2-phenyindole at a 1:500 dilution (Life Technologies), and HCS Cell Mask at a 1:5000 dilution (Life Technologies). After soaking for one hour in the dark, VICs were washed with PBS with 0.05% vol/vol Tween20 and stored in PBS until imaging.
+ Open protocol
+ Expand
9

Western Blot Analysis of Osteogenic Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lysates were obtained using RIPA lysis buffer (Beyotime, Shanghai, China) containing 10 mM phenylmethylsulphonylfluoride as a protease inhibitor (PMSF; Beyotime), and 50 μg of total protein was separated in a Bis‐Tris polyacrylamide gel and transferred onto a nitrocellulose membrane. The membrane was then incubated in 5% bovine serum albumin (BSA) containing primary rabbit‐anti‐human polyclonal antibodies at 4°C overnight. Next, samples were incubated with IRDye® 800CW goat‐anti‐rabbit antibody at room temperature for 1 hr and visualized via chemiluminescence with an infrared laser scanning system (Odyssey Licor, Lincoln, NE, USA). The following primary rabbit‐anti‐human antibodies were used: anti‐JAG1 (1:1000, ab109536; Abcam); anti‐Runx2 (1:1000, ab23981; Abcam); anti‐Sp7/Osterix (1:2000, ab22552; Abcam); anti‐ALP (1:2000, ab95462; Abcam); anti‐OCN (1:500, ab93876; Abcam); anti‐OPN (1:1000, ab8448; Abcam); anti‐cleaved‐Notch 1 (V1754) (1:500, YC0067; Immunoway, Newark, DE, USA); anti‐cleaved‐Notch 2 (D1733) (1:500, YC0069; Immunoway); anti‐β‐Catenin (1:5000, ab32572; Abcam); anti‐ GSK‐3β (1:5000, ab32391; Abcam); and anti‐GAPDH (1:2500, ab9485; Abcam).
+ Open protocol
+ Expand
10

Chondrocyte Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemical (IHC) staining was performed to analyze the proteins expressed by chondrocyte-related genes. Tissue sections were processed for antigen retrieval by digestion with 0.05% trypsin at 37°C for 15 minutes. Tissue sections were incubated with primary antibodies to Sox9 (sc-166505) (Santa Cruz, USA), collagen type II alpha 1 (col2a1) (sc-517571) (Santa Cruz, USA), collagen type X (ColX) (ab58632) (Abcam, Cambridge, MA, USA), and matrix metalloproteinase 13 (MMP13) (sc-101564) (Santa Cruz, USA) overnight at 4°C. Then, sections were incubated with the secondary antibodies for 1 hour and developed in 3,3′-diaminobenzidine (DAB) chromogen (brown) (Invitrogen, USA). The sections were counterstained with hematoxylin, and observed by light microscopy (Leica, Germany).
For the immunofluorescence (IF) staining, the sections were stained with primary antibodies against runt-related transcription factor (RUNX2) (ab23981) (Abcam, Cambridge, MA, USA), Indian hedgehog (Ihh) (ab39634) (Abcam, Cambridge, MA, USA) and parathyroid hormone-related protein (PHrP) (sc-12722) (Santa Cruz, USA). Imaging was performed using a Leica fluorescence microscope. Quantification of the positively-stained cells was performed by microscopy.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!