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9 protocols using r3 34

1

Biotinylated Lipid-Shelled Microbubbles for Targeting

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Biotinylated lipid-shelled decafluorobutane microbubbles were prepared by sonication of gas-saturated aqueous lipid suspension of distearoylphosphatidylcholine (2 mg/mL), polyoxyethylene-40-stearate (1 mg/mL), and distearoylphosphatidylethanolamine-PEG (2000) biotin (0.4 mg/mL; Avanti Polar Lipids, Alabaster, AL). Surface conjugation of biotinylated ligands was performed as described previously using a streptavidin bridge.7 (link) Ligands used for targeting were: dimeric recombinant murine VWF A1 domain (mature VWF amino acids 445 to 716) for targeting platelet GPIbα;6 (link),8 (link) a cell-derived biotinylated peptide representing the N-terminal 300 amino acids of GPIbα for targeting endothelial VWF;8 (link) and monoclonal antibodies against the extracellular domain of either P-selectin (RB40.34, BD Biosciences, San Jose, California), or VCAM-1 (clone 429, BD Biosciences). Control microbubbles were prepared with isotype control antibody (R3-34, BD Biosciences). Microbubble concentrations and size distributions were measured by eletrozone sensing (Multisizer III, Beckman Coulter).
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2

Microbubble Preparation for Targeted Binding

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Full methods for preparation of microbubbles targeted to platelet GPIbα (MBPlt), “activated” VWF (MBVWF), or P-selectin (MBP) are provided in the on-line supplement. Briefly, biotinylated lipid-shelled decafluorobutane microbubbles were prepared and surface conjugation of targeting ligands was performed using: recombinant VWF A1 domain for MBPlt,16 (link) a GPIbα peptide for MBVWF,3 (link) a monoclonal antibody (RB40.34, BD Biosciences, San Jose, CA) for MBP. Control non-targeted microbubbles (MB) were prepared using a non-specific non-binding control monoclonal antibody (mAb) (R3–34, BD Biosciences).
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3

Inhibition of IL-5 and CTSL in Mice

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In mice, the inhibition of IL-5 was accomplished by administering an intravenous injection of an anti-IL-5 antibody (TRFK5; BD Pharmingen) or an isotype-matched control antibody (R3-34; BD Pharmingen) at a dose of 200 g/mouse, 24 h before PPE challenge. For CTSL inhibition, mice were pre-treated with 500 μg of CTSL inhibitor (SID 26681509, quarterhydrate) or a vehicle control, 12 h before PPE instillation. On the 3rd day after the final PPE challenge, the mice were euthanized, and samples were collected for subsequent analysis.
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4

Biotinylated Microbubbles for Targeted Imaging

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Biotinylated lipid-shelled decafluorobutane microbubbles were prepared by sonication of a gas-saturated aqueous suspension of distearoylphosphatidylcholine (2 mg/mL), polyoxyethylene-40-stearate (1 mg/mL), and distearoylphosphatidylethanolamine-PEG(2000)biotin (0.4 mg/mL). Conjugation of biotinylated ligand to the microbubble surface was performed with biotin-streptavidin bridging as previously described.(15 (link)) Ligands used for targeting were: dimeric murine recombinant A1 domain of VWF A1 (mature VWF amino acids 445 to 716) for targeting platelet GPIbα for MBPlt, a cell-derived peptide representing the N-terminal 300 amino acids of GPIbα for MBVWF,(7 (link)) and monoclonal antibodies against the extracellular domain of either P-selectin (RB40.34, BD Biosciences), or VCAM-1 (clone 429, BD Biosciences) for MBP and MBV, respectively. Control MB were prepared with isotype control antibody (R3-34, BD Biosciences). Microbubble concentrations and size distributions were measured by electrozone sensing (Multisizer III, Beckman Coulter).
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5

Maternal IL-5 Neutralization during Pregnancy

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ACLP+/− pregnant females were injected intravenously with a neutralizing antibody against IL-5, (TRFK5; BD Pharmingen) or an isotype control (R3-34; BD Pharmingen) for five consecutive days, using a dose of 100 μγ on E13.5-E14.5 and 150 μγ on E15.5-E17.5. The amount of antibody was calculated to achieve a fetal dose of 10mg/kg (the same dose that is typically used in an adult mouse (13 (link))) and an estimated maternal-fetal transmission of 2-3% (14 (link)). Fetal intestines and liver were analyzed on E18.5. In the case of fetal intervention, fetuses were injected with the same antibodies on E13.5 using a fetal intrahepatic injection as previously described (15 -17 (link)). Briefly, mothers were anesthetized and the uterus was exposed by performing a laparotomy. The fetuses were injected individually, through the translucent intact uterus, with the neutralizing antibody; controls were injected with the isotype control antibody or PBS in a volume of 5 μl, using pulled glass micropipettes. The laparotomy was closed in layers and the fetuses were analyzed on E18.5.
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Blocking PD-1/PD-L1 Interaction Assay

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Blocking assays were conducted in microplates using EqPD-1-Ig and EqPD-L1-Ig to analyze the ability of the anti-PD-L1 mAbs to block PD-1/PD-L1 binding. MaxiSorp Immuno Plates (Thermo Fisher Scientific) were coated with EqPD-1-Ig (1 μg/mL) in carbonate–bicarbonate buffer (Sigma–Aldrich) and blocked using SuperBlock T20 (PBS) Blocking Buffer (Thermo Fisher Scientific). Biotinylated EqPD-L1-Ig was preincubated with anti-PD-L1 mAb 5A2-A1 (rat IgG1) [19 (link)], 6C11-3A11 (rat IgG2a) [34 (link)], rat IgG1 isotype control (R3-34, BD Biosciences), or rat IgG2a isotype control (R35-95, BD Biosciences) at various concentrations (0, 1.25, 2.5, 5.0, 7.5, and 10 μg/mL) at 37°C for 30 min. The preincubated reagents were added to the microplates and incubated at 37°C for another 30 min. EqPD-L1-Ig binding was detected using horseradish peroxidase-conjugated Neutravidin (Thermo Fisher Scientific) and TMB One Component Substrate (Bethyl Laboratories, Montgomery, TX, USA). Optical density at 450 nm was measured by a microplate reader MTP-900 (Corona Electric, Hitachinaka, Japan). Three independent experiments were each performed in duplicates.
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7

Biotinylated Lipid-Shelled Microbubbles for Targeted Imaging

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Biotinylated lipid-shelled decafluorobutane microbubbles (MB) were prepared by sonication of a gas-saturated aqueous suspension of distearoylphosphatidylcholine (2 mg/mL), polyoxyethylene-40-stearate (1 mg/mL), and distearoylphosphatidylethanolamine-PEG (2000) biotin (0.4 mg/mL) (Avanti Polar Lipids). Surface conjugation of biotinylated ligands was performed as previously described using a streptavidin bridge.14 (link) Microbubbles targeted to platelet GPIbα (MB-A1) were prepared by surface conjugation of dimeric recombinant murine VWF A1 domain (mature VWF amino acids 445 to 716).9 (link) Microbubbles targeted to VWF (MB-GC300) were prepared using a cell-derived biotinylated peptide representing the N-terminal 300 amino acids of GPIbα. Control non-targeted microbubbles (MB) were prepared using either human VWF A1 domain with a loss-of-function mutation (G561S) or a non-specific non-binding control monoclonal antibody (mAb) (R3-34, BD Biosciences) as appropriate. Microbubble concentrations and size distributions were measured by electrozone sensing (Multisizer III, Beckman Coulter).
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8

Anti-bovine PD-L1 mAb Staining

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EqPD-L1-EGFP cells were incubated with four clones of anti-bovine PD-L1 mAbs (4G12-C1, rat IgG 2a ; 5A2-A1, rat IgG 1 ; 6C11-3A11, rat IgG 2a ; 6G7-E1, rat IgM) [5, (link)20] (link) were stimulated in cultivation with 20 ng/mL of PMA (Sigma-Aldrich) and 1 µg/mL of ionomycin (Sigma-Aldrich) for 24 h, as described above. Fresh and stimulated PBMCs were incubated with PBS supplemented with 10% goat serum (Thermo Fisher Scientific) at room temperature for 15 min to prevent nonspecific reactions. Cells were washed and stained with anti-PD-L1 mAbs (5A2-A1, rat IgG 1 ; 6C11-3A11; rat IgG 2a ) [5, (link)20] (link) at room temperature for 30 min. Rat IgG 1 (R3-34, BD Biosciences) and rat IgG 2a isotype controls (R35-95, BD Biosciences) were used for negative control staining. Cells were washed with PBS containing 1% BSA (Sigma-Aldrich) and labeled with APC-conjugated anti-rat Ig antibody (Southern Biotech) at room temperature for 30 min.
After rewashing, cells were immediately analyzed by FACS Verse (BD Biosciences).
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9

PD-1/PD-L1 Binding Inhibition Assay

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Blocking assays were conducted on microplates using EqPD-1-Ig and EqPD-L1-Ig to analyze the ability of the anti-PD-L1 mAbs to block PD-1/PD-L1 binding. MaxiSorp Immuno Plates (Thermo Fisher Scientific) were coated with EqPD-1-Ig (1 μg/mL) in carbonate-bicarbonate buffer (Sigma-Aldrich) and blocked with SuperBlock T20 (PBS) Blocking Buffer (Thermo Fisher Scientific).
Biotinylated EqPD-L1-Ig was preincubated with anti-PD-L1 mAb 5A2-A1 (rat IgG 1 ) [5] (link), 6C11-3A11 (rat IgG 2a ) [20] (link), rat IgG 1 isotype control (R3-34, BD Biosciences), or rat IgG 2a isotype control (R35-95, BD Biosciences) at various concentrations (0, 1.25, 2.5, 5.0, 7.5, 10 μg/mL) at 37°C for 30 min. The preincubated reagents were added to the microplates and incubated at 37°C for a further 30 min. EqPD-L1-Ig binding was detected using horseradish peroxidase-conjugated Neutravidin (Thermo Fisher Scientific) and TMB One Component Substrate (Bethyl Laboratories, Montgomery, TX, USA). Optical density at 450 nm was measured by a microplate reader MTP-900 (Corona Electric, Hitachinaka, Japan). Three independent experiments were each performed in duplicate.
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