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40 protocols using video freeze

1

Fear Conditioning and Extinction in Mice

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Mice were handled for 3 consecutive days prior to fear conditioning. Fear conditioning and extinction learning were conducted with an NIR Video Fear Conditioning System (MedAssociates; St. Albans, VT, USA) as previously described (Lucas et al. 2014). On the first day, mice underwent fear conditioning consisting of 6 pairings of an auditory tone (2 kHz, 80 dB, 20 s) with foot shock (1 mA, 2 s) in which the tone and foot shock co-terminated. An acclimation period of 200 s in training arena preceded the onset of cues, and pairings were separated by an 80 s inter-trial interval. The training arena was cleaned with 70% ethanol between sessions. On the second and third days, mice underwent extinction and re-extinction that consisted of 20 tone presentations in an altered context cleaned with isopropanol between sessions. Data were analyzed with VideoFreeze (MedAssociates), and freezing bouts ≥ 1 second were included in analyses.
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2

Contextual Fear Conditioning in Rats

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Contextual fear conditioning was performed to assess hippocampus-dependent associative learning. For habituation, the rat was placed into the conditioning chamber without stimuli for 5 min. In the training phase, the rat was placed into the conditioning chamber (Med Associates, USA) for 3 min and then received five shock and tone pairs (30-s tone; 5 kHz; 70 dB; 1-s foot shock; 0.65 mA DC current) at an interval of 30 s. Contextual fear conditioning was measured 24 h after the training phase in the same chambers. The rat was placed into the same chamber, and no shock or tone was delivered. Freezing behavior was recorded for 5 min with specialized software (Video Freeze, Med Associates, USA).
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3

Automated Freezing Behavior Quantification

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Freezing is defined as the lack of movement except for respiration (Fanselow, 1980 (link)). The software (VideoFreeze, Med-Associates Inc.) performed real-time video recordings at 30 frames per second using a set threshold level that has been previously validated to match human scored freezing (Anagnostaras et al., 2001 (link)). Each frame has an "activity unit" score and based on previously validated hand scoring measures, freezing was defined as subthreshold activity, i.e. when the motion threshold held at 50 activity units for longer than 1 sec. Percentage freezing=Time Freezing/Total time ×100. Data are presented as mean percentages (+/− SEM).
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4

Automated Behavioral Tracking in EPM

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Behavior was recorded digitally from a camera mounted above each test chamber at 30 FPS. Following the completion of experiments, each recorded EPM video was analyzed using ANY-maze for positional tracking of the animal along the apparatus. For EPM mapping we measured open arm entries, time spent in open arms, and closed arm. VideoFreeze (MedAssociates) was used to measure animal freezing in QC testing from recorded videos. Freezing was determined as an absence of all visible movement except that required for respiration; in VideoFreeze, we set the motion threshold to 18 au with a minimum freeze duration of 1 s (30 frames). Contextual fear was assessed by total freezing time over the first 3 min of the test. Cued fear was assessed by total freezing time in response to the presentation of the first, second, and third CS during ITI. One exception was with freezing measurements during genetic mapping with BXD lines. Due to the variable coat color across lines, we used ANY-maze for animal tracking and freezing measurements as it performed better than VideoFreeze.
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5

Measuring Noise-Induced Burst Activity

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We measured bursts of activity as a ratio of the animal’s peak activity during a noise trial relative to its peak activity during the same interval just prior to the given trial. PAR was calculated using the raw Videofreeze (MedAssociates) activity score, which compares the amount of change in pixels between adjacent video frames collected at 30 frames/s. We took the maximum activity score (i.e., the greatest degree of pixel change) during a designated interval (10-s noise trial or pre-noise interval). PAR was calculated as the maximum activity score (During Noise / (During Noise +Pre Noise)), where During Noise = 10 s Noise and Pre Noise = 10 s before that Noise trial. For this measure, a value of 0.5 indicates there was no change in the peak activity from before and during the noise trial. A PAR approaching 1.0 indicates a vigorous burst of activity during the noise trial that far exceeded its baseline.
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6

Measuring Noise-Induced Burst Activity

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We measured bursts of activity as a ratio of the animal’s peak activity during a noise trial relative to its peak activity during the same interval just prior to the given trial. PAR was calculated using the raw Videofreeze (MedAssociates) activity score, which compares the amount of change in pixels between adjacent video frames collected at 30 frames/s. We took the maximum activity score (i.e., the greatest degree of pixel change) during a designated interval (10-s noise trial or pre-noise interval). PAR was calculated as the maximum activity score (During Noise / (During Noise +Pre Noise)), where During Noise = 10 s Noise and Pre Noise = 10 s before that Noise trial. For this measure, a value of 0.5 indicates there was no change in the peak activity from before and during the noise trial. A PAR approaching 1.0 indicates a vigorous burst of activity during the noise trial that far exceeded its baseline.
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7

Quantifying Fear Memory Freezing

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For all experiments, freezing was the index of fear memory. We used a commercially available near-infra data acquisition system and software (Med Associates Video Freeze) that had been calibrated to very experienced human observers. Freezing is defined as the absence of all visible movement except that required for respiration.
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8

Fear Conditioning Behavioral Training

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All behavioral training was performed using two sets of four identical fear conditioning chambers equipped with a Med-associates VideoFreeze near infrared video tracking system. Chambers were enclosed within sound attenuated chambers in a well-lit room separated from the observers.
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9

Associative Fear Memory Testing Protocol

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Associative fear memory was tested for three consecutive days using VideoFreeze (Med-Associates Inc., Georgia, VT, USA). On training day animals were placed in a chamber with white light for 3 min, then a tone is played paired with a foot shock (0.05mA) 3 times over the next 3 min. This tone/shock pairing occurs once every minute, once the test is complete the animal is returned to their home cage. 24 h later, context day, the animal is placed back in the chamber for 5 min with the white light but no tone or shock and is returned to their home cage after. For cued testing, the chamber is altered to appear as a “new environment”: the white light remains present, but the walls and floor are covered with plastic and vanilla extract is placed underneath the chamber floor. Animals are placed in the new environment for 3 min, then the tone from training day is played for the duration of the next 3 min. The amount of time the animal spends freezing is recorded. Animals were tested between 10 and 13 weeks of age.
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10

Behavioral Assessment of Alcohol Use Disorder

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Animals were given a behavioral battery to assess various stereotyped behaviors that have been associated with other preclinical models of AUD. Briefly, animals were allowed to acclimate to the room in their home cages for 30 min following room transfer and sessions started at 10AM. First, animals were videotaped in a clean, bare Plexiglass cage for 15 min. Grooming, stereotyped rostro caudal grooming transitions, and rearing were assessed by a blinded scorer (see Supplemental Methods (Kalueff et al., 2007 (link))). Three days later, animals were given a 10-min open field test, digitally scored by EthoVision (Noldus, Leesburg, VA) software. The subsequent day, animals were exposed to 1 uncued foot-shock (1 mA, 1s) during an 8-min session with 2% Simple Green as an olfactory cue, blue polka dots as a visual cue, and metal bar flooring as a tactile cue. Animals were then reintroduced to the same context the next day to evaluate context-dependent fear during a 15-min session. Sessions were scored using Video Freeze (Med Associates Fairfax, VT) software. Finally, animals were given an intermittent access 2-bottle choice between potable water and 10% w/w EtOH, (see Supplemental Methods (Marty et al., 2020a (link); Meyer et al., 2013 (link); Simms et al., 2008 (link))).
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