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6 protocols using porcine pepsin p7000

1

Bioactive Compounds Extraction and HPLC Analysis

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Organic inulin from agave powder was purchased from Natura Bio Foods® (≤90% purity), isolated soy protein from NATSA Superfood® (≤90% purity), commercial quercetin (aSquared Nutrition®) (≤95% purity), commercial (-)-epicatechin (CocoaVia®) (≤17% of purity), quercetin 95% (HPLC, Sigma Aldrich, San Luis, MO, USA), (-)-epicatechin 90% (HPLC, Sigma Aldrich, San Luis, MO, USA), absolute ethanol 99.5% (J.T. Baker), Milli Q (Milli-Q Integral 15 Equipment, Merck México, Estado de Mexico, Mexico), distilled water (Milli-Q Integral 15 Equipment, Merck México, Estado de Mexico, Mexico), acetonitrile 99.95% (DEQ), methanol 99.96% (J.T. Baker), acetone 99.95% (J.T. Baker), HCl acid 37.40% (DEQ), NaOH 99.95% (DEQ), and glacial acetic acid 99.96% (DEQ). The in vitro digestion enzyme was α-amylase A-3176 (Sigma-Aldrich, Monterrey, Mexico), porcine pepsin P-7000 (Sigma-Aldrich, Monterrey, Mexico) and pancreatin P-7545 was added (Sigma-Aldrich, Monterrey, Mexico). For the HPLC protocol the chemicals were Acetonitrile HPLC (VWR Chemicals), water HPLC (TEDIA), formic acid solution 49–51% (grade HPLC, Fluka Analytical). The other chemicals used in this study were of analytical grade and purchased from local suppliers.
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2

Acellular Porcine Corneal Stromal Hydrogel

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APCS was prepared from the native porcine cornea (NPC), as described previously [19 (link)]. In short, NPC was freeze dried (Labconco, USA), powdered by a freezer-mill (SPEX, USA), and filtered through a 40-mesh screen. Comminuted acellular corneal stoma powder ranging from 10–30 mg was separately enzymatically digested in 8 mg/ml porcine pepsin (P7000, ≥250 unites/mg, Sigma) at 0.01N HCl with shaking for 48 h at 25 °C. The obtained APCS digest solutions were frozen until use. Gelation was induced by neutralizing the pH and salt concentration at 4°C followed by warming to 37 °C. In detail, pH neutralization was accomplished by adding one-tenth of the digest volume of 0.1 N NaOH, and the salt concentration was adjusted by one-ninth the volume of 10x PBS. After that, the neutralized digest (APCS-sol) was placed in a non-humidified incubator heated to 37 °C until the acellular porcine corneal stromal hydrogel (APCS-gel) was formed. As a control to compare the characteristics of the APCS-gels, fibrin gels were prepared with final concentrations of 7.4 mg/ml fibrinogen and 5.4 U/ml thrombin as previously reported [25 (link), 26 (link)]. Additionally, a commercial fibrin gel, Tisseel (Baxter Healthcare Corporation, Deerfield, IL, USA) was also included which was produced by fibrinogen (67–106 mg/ml) and thrombin (400–625 IU/ml) according to the manufacturer’s instructions.
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3

Synthesis and Purification of Garlic Organosulfur Compounds

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Diallyl sulfide (DAS; 97%), diallyl disulfide (DADS; 80%), porcine pepsin (P7000), porcine pancreatin (P7545) and porcine bile salts (B8756) were purchased from Sigma-Aldrich (Saint Louis, USA). Diallyl trisulfide (DATS; 98%) was purchased from LKT Laboratories, Inc (St. Paul, MN, USA). Acetonitrile (ACN) chromatographic grade was purchased from J.T.Baker (USA). Methanol (MeOH), and dichloromethane (DCM) chromatographic grade were purchased from Merck (Kenilworth, NJ, USA). Ultrapure water (18 MΩcm) was obtained from a Milli-Q water purification system (Millipore, Molsheim, France). Allicin was synthesized by oxidation of DADS (Ramírez, Locatelli, Torres-Palazzolo, Altamirano, & Camargo, 2017 (link)). E/Z ajoene was obtained by heating and stirring of allicin in acetone/water (40:60, v/v) (Ramírez, Locatelli, Torres-Palazzolo et al., 2017) (link). 2-vinyl-4H-1,3-dithiine was synthesized by heating allicin in acetone/methanol (60:40, v/v) following the procedure described by Iberl, Winkler, & Knobloch, 1990 with slight modifications. All synthesized compounds were properly purified and quantified as described in previous work (Ramírez, Locatelli, Torres-Palazzolo et al., 2017) (link).
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4

Whey Protein Isolate Characterization

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Whey protein isolate (WPI) with ≥ 90% protein content was gifted by Fonterra Co-operative Group Limited (Auckland, New Zealand). Dextran (Dx) of molecular weight (MW) 500 kDa and porcine pepsin (P7000, measured enzyme activity: 371 U mg -1 using haemoglobin as the substrate) were purchased from Sigma-Aldrich Company Ltd (Dorset, UK). Medium-chain triglyceride (MCT-oil) Miglyol ® 812 with a density of 945 kg m 3 at 20 o C was used as the lipid phase (Cremer Oleo GmbH & Co, Germany) . Sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) reagents including Bolt™ 4-12% Bis-Tris Plus gels, 20x Bolt™ MES SDS Running Buffer, 4 x Bolt™ LDS Sample Buffer and PageRuler™ Plus Pre-stained Protein Ladder were purchased from Thermo Fisher Scientific (Loughborough, UK). All reagents were of analytical grade and used without further purification unless otherwise reported. All solutions were prepared with Milli-Q water with a resistivity of 18.2 MΩ cm at 25 °C (Milli-Q apparatus, Millipore, Bedford, UK). Sodium azide (0.02 wt %) was added as a preservative.
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5

Whey Protein Isolate Characterization

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Whey protein isolate (WPI) with ≥ 90% protein content was gifted by Fonterra Co-operative Group Limited (Auckland, New Zealand). Dextran (Dx) of molecular weight (MW) 500 kDa and porcine pepsin (P7000, measured enzyme activity: 371 U mg -1 using haemoglobin as the substrate) were purchased from Sigma-Aldrich Company Ltd (Dorset, UK). Medium-chain triglyceride (MCT-oil) Miglyol ® 812 with a density of 945 kg m 3 at 20 o C was used as the lipid phase (Cremer Oleo GmbH & Co, Germany) . Sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) reagents including Bolt™ 4-12% Bis-Tris Plus gels, 20x Bolt™ MES SDS Running Buffer, 4 x Bolt™ LDS Sample Buffer and PageRuler™ Plus Pre-stained Protein Ladder were purchased from Thermo Fisher Scientific (Loughborough, UK). All reagents were of analytical grade and used without further purification unless otherwise reported. All solutions were prepared with Milli-Q water with a resistivity of 18.2 MΩ cm at 25 °C (Milli-Q apparatus, Millipore, Bedford, UK). Sodium azide (0.02 wt %) was added as a preservative.
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6

In vitro Digestion of WPI and Lipids

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Whey protein isolate (WPI) with 90% protein content was purchased from Fonterra Co-operative Group Limited, Auckland, New Zealand. Sunflower oil was purchased from a local supermarket. Porcine pepsin (P7000, actual activity: 526 U/mg), porcine pancreatin (P7585, 8 × USP), porcine bile extract B8631 (total bile salt content 49 wt%; with 10-15% glycodeoxycholic acid, 3-9% taurodeoxycholic acid, 0.5-7% deoxycholic acid; phospholipids 5 wt%) were purchased from Sigma-Aldrich Company Ltd., Dorset, UK. Pure lipase (activity 12,000 units/g solid) extracted from porcine pancreas was purchased from MP Biomedicals, Cambridge, UK. All other chemicals used were of analytical grade unless otherwise specified. Milli-Q water (water purified by treatment with a Milli-Q apparatus, Millipore Corp., Bedford, MA, USA) was used for all experiments.
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