The largest database of trusted experimental protocols

11 protocols using mir 195 5p mimic

1

miR-195-5p Regulation of E2F3 in AMC-HN-8 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
miR-195-5p mimic and the negative control miRNA (miRNA-NC) were obtained from Guangzhou RiboBio Co., Ltd. The E2F3 overexpression vector pcDNA-E2F3 and empty control vector pcDNA-NC were constructed by Shanghai GenePharma Co., Ltd. The sequences were as follows: miR-195-5p mimic sense, 5'-UAGCAGCACAGAAAUAUUGGC-3'; miR-195-5p mimic antisense, 5'-CAAUAUUUCUGUGCUGCUAUU-3'; mimics negative control (miR-NC) sense, 5'-UUCUCCGAACGUGUCACGUTT-3'; miR-NC antisense, 5'-ACGUGACACGUUCGGAGAATT-3'. Cells were plated into 6-well plates (1x106 cells per well), and transfection was performed when cells at the logarithmic growth phase reached 80% confluence. According to the product instructions, AMC-HN-8 cells were transfected with miR-195-5p mimic (50 nM), miR-NC (50 nM), pcDNA-E2F3 (100 nM) and pcDNA-NC (100 nM) using Lipofectamine® 2000 (Invitrogen; Thermo Fisher Scientific, Inc.). The transfection efficiencies were assessed by RT-qPCR at 48 h after transfection.
+ Open protocol
+ Expand
2

miR-195-5p Mimic and Inhibitor Transfection

Check if the same lab product or an alternative is used in the 5 most similar protocols
The miR-195-5p mimic and inhibitor were synthesized by GenePharm, Inc. (Sunnyvale, CA, USA). The sequences were as follows: miR-195-5p mimic, sense 5′-UAGCAGCACAGAAAUAUUGGC-3′ and miR-195-5p mimic, antisense 5′-CAAUAUUUCUGUGCUGCUAUU-3′; miR-195-5p inhibitor: 5′-GCCAAUAUUUCUGUGCUGCUA-3′. The miR-195-5p mimic and inhibitor were transfected into cells using Lipofectamine™ 2000 reagent (Invitrogen; Thermo Fisher Scientific, Inc.) according to the manufacturer's protocol. At 2 day pre-transfection, the cells were cultured in a 6-well-plate at 1.0×105 cells per well. In brief, 20 ng miRNA oligo was diluted in 50 µl Opti-MEM medium, and 2 µl Lipofectamine™ 2000 reagent was diluted in 50 µl Opti-MEM reduced serum medium. Following gentle mixing and incubation at room temperature for 5 min, the two mixtures were combined and incubated for 20 min. The mixture was added into each well and the cells were incubated at 37°C. The medium was replaced 6 h later and incubated for 44 h prior to harvesting cells.
+ Open protocol
+ Expand
3

Validating miR-195-5p Activity on MYCBP

Check if the same lab product or an alternative is used in the 5 most similar protocols
For luciferase reporter gene assay, a MYCBP 3’UTR clone in the plasmid was synthesized commercially using RiboBio to verify the activity of miR-195-5p. We purchased MiR-195-5p mimic from GenePharma, whereas the GV272 luciferase reporter gene construct containing wild-type (WT) or mutated MYCBP 3’UTR sequence was obtained from GeneChhem (Shanghai, China), where plasmid GV045 was used as an internal reference. The above constructs and renin luciferase plasmid were transfected into NSCLC cells as an internal control. After 24 h transfection of MYCBP 3’UTR clone plasmid, MiR-195-5p mimics were reintroduced, followed by culturing of cells for 12 h, and then luciferase activity was detected. The luciferase values provided in the figure represent at least three independent transfection experiments performed independently.
+ Open protocol
+ Expand
4

Esophageal Cancer Cell Transfection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human normal esophageal epithelial cells (HEEC) and ESCC cell lines EC9706, Eca109, TE-13, TE-1 and TTN were provided by China Center for Type Culture Collection (Wuhan, China). Cells (3 × 105 cells/well) with 80% confluence were subjected to transfection using Lipofectamine 2000 (Invitrogen, CA, United States). Overexpressed (oe)-VEGFA, small interfering RNA (si)-LINC00662, oe-LINC00662, miR-195-5p mimic and their corresponding negative control (NC) were all from GenePharma (Shanghai, China) (Li Z et al., 2019 (link)).
+ Open protocol
+ Expand
5

Silencing Circular FURIN Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
si-circ-FURIN (si-circ-FURIN 1#: AACCAGTGTGCGAGGAAGGCT, si-circ-FURIN 2#: ACCAGTGTGCGAGGAAGGCTT), si-negative control (nc; UUCUCCGAACGUGUCACGUTT), miR-195-5p inhibitor (GCCAAUAUUUCUGUGCUGCUA) and negative control inhibitor (CAGUACUUUUGUGUAGUACAA), miR-195-5p mimic (UAGCAGCACAGAAAUAUUGGC) and negative control mimic (UUCUCCGAACGUGUCACGUTT), empty vector, and BCL2 overexpression vector were obtained from GenePharm (Shanghai, China). Lipofectamine 3000 (Invitrogen, Carlsbad, CA, USA) was used for transient transfection following the manufacturer’s instrument. Forty-eight hours later, transfection efficiency was examined using RT-qPCR.
+ Open protocol
+ Expand
6

Transfection of miR-195-5p and SKI in cell lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
miR-195-5p mimic (5'-UAGCAGCACAGAAAUAUUGGC-3') and its negative control (NC) (5'-UCACAACCUCCUAGAAAGAGUAGA-3') were obtained from Shanghai GenePharma Co., Ltd. SKI overexpression plasmids (OE) and its empty vector were synthesized and provided by Shanghai GenePharma Co., Ltd. XPTS-1 and EOMA cells were transfected with 50 nM of miR-195-5p mimics, NC mimics, SKI OE or SKI empty vector using Lipofectamine® 2000 at 37˚C (Thermo Fisher Scientific, Inc.). After 48 h, the transfected cells were used in the following experiments.
+ Open protocol
+ Expand
7

Modulating HUVEC Responses to Glucose Stress

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human umbilical vein endothelial cells (HUVECs; ATCC) were cultured with CC-3162 EGM-2 Bulletkit (Lonza, MD, United States). According to the instructions of Lipofectamine 2000 (Invitrogen, Carlsbad, CA, United States) and opti-MEM reduced serum medium (GIBCO life technologies, Grand Island, NY, United States), the cells cultured for 24h in 12-well plates were treated with miR-195-5p inhibitor, miR-195-5p mimic, si-smad7, or corresponding controls (GenePharma). After 6h, opti-MEM reduced serum medium was replaced by complete cell culture medium with high concentration of glucose (HG: 25mmol/L, D-glucose, G5500, Sigma-Aldrich) and negative control (NG: 25mmol/L, L-glucose, G8644, Sigma-Aldrich) for 48h (Li et al., 2020 (link)). In order to further verify the regulatory effect of TGF-β1/smads pathway, HUVECs were stimulated using 3μmol/L TGF-β1R-I inhibitor LY-364947 (LY, # 54678S, CST, Beverly, MA, United States) for 24h (Che et al., 2020 (link)). The cell treatment process was shown in Supplementary Figure 2.
+ Open protocol
+ Expand
8

miRNA-195-5p Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
RNA was extracted from tissue and cell samples using RNAiso (TAKARA, Beijing, China) according to the manufacturer’s instructions and reverse-transcribed using the Mir-X miRNA first-strand strand synthesis system (TAKARA, Beijing, China). Finally, quantitative PCR was used to detect the relative expression of mir-195-5p in multiple samples and U6 RNA was used as an endogenous control. mir-195-5p sense primer was 5′- CGTAGCAGCACAGAAATATTGGC -3′.
Mir-195-5p mimics were designed and synthesized by the Gene Pharma Corporation (Shanghai, China), mir-195-5p was transfected into Huh7 and MHCC97L cells using lipo2000, and media were freshly replaced after 24 h.
+ Open protocol
+ Expand
9

Knockdown and Overexpression of LIPE-AS1

Check if the same lab product or an alternative is used in the 5 most similar protocols
The short-hairpin RNA (shRNA) targeting LIPE-AS1 (sh-LIPE-AS1), LIPE-AS1 over-expressing plasmids, miR-195-5p mimics, and inhibitors as well as their negative controls were obtained from Shanghai GenePharma Co., Ltd. (Shanghai, China). HCC94 and Hela cells were seeded in the 24-well plates with 2 × 105 cells each well. Lipofectamine 2000 reagent (Sangon Biotech, Shanghai, China) was applied for cell transfection according to the manufacturers' protocol.
+ Open protocol
+ Expand
10

Transfection of miR-195-5p in Breast Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human MDA-MB-231 breast cancer and HEK293T cells were purchased from the Chinese Science Institute (Shanghai, China). The cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% fetal bovine serum (FBS) (both from Gibco, USA), penicillin (100 U/ml) and streptomycin (100 μg/ml) (Enpromise, Hangzhou, China) at 37°C with 5% CO2 in saturated humidity. Cells in the logarithmic growth phase (~80% confluence) were selected for the experiments. Those with over 95% viability as shown by trypan blue staining were qualified for further experiments.
miR-195-5p mimics and non-specific negative control (NC) oligos were purchased from GenePharma (Shanghai, China). The sequence of the miR-195-5p mimic was 5′-UAGCA GCACAGAAAUAUUGGC-3′ and the sequence of the NC mimic was 5′-UCACAACCUCCUAGAAAGAGUAGA-3′. For transfection, MDA-MB-231 cells (2×105) were added into each well of a 6-well plate and cultured with serum- and antiobiotic-free DMEM. When the cell density achieved 30–40% confluence, Lipofectamine transfection reagent (Invitrogen, USA) was used to introduce the mimics according to the manufacturer’s instructions. The ratio of mimics to Lipofectamine was 1 μg to 3 μl.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!